prot_Ecto-sp6_S_contig87.17825.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17825.1
Unique Nameprot_Ecto-sp6_S_contig87.17825.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length191
Homology
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BLAST of mRNA_Ecto-sp6_S_contig87.17825.1 vs. uniprot
Match: A0A6H5JDQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ5_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 3.820e-71
Identity = 172/193 (89.12%), Postives = 174/193 (90.16%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPLFDDDNXXXXXXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGDAG---EEDAGGGXXXXXXXXXXXXXXXXXXXXXNTASELAAKLKKKRRQAKRRNYVEFSAHEN 190
            MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPP FDDD     XXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGDAG   E      XXXXXXXXXXXXXXXXXX   NTAS++AAKLKKKRRQAKRRNYVEF AHEN
Sbjct:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPPFDDDKNEATXXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGDAGDGGEXXXXXXXXXXXXXXXXXXXXXXXXGERNTASDVAAKLKKKRRQAKRRNYVEFPAHEN 193
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BLAST of mRNA_Ecto-sp6_S_contig87.17825.1 vs. uniprot
Match: D7G0M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M3_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 9.930e-66
Identity = 157/166 (94.58%), Postives = 157/166 (94.58%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPLFDDDNXXXXXXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGDAGEEDAGGGXXXXXXXXXXXXXXXXXXXXXNTASEL 166
            MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPLFDDDNXXXXXXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGDAGEEDAGGG XXXXXX    XXXXXX    NTASEL
Sbjct:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPLFDDDNXXXXXXXXXXXXXXXXXXXXXXXXLSDAEASMVDEDTAMGDAGEEDAGGGPXXXXXXDGVSXXXXXXEGGRNTASEL 166
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BLAST of mRNA_Ecto-sp6_S_contig87.17825.1 vs. uniprot
Match: A0A835Z2D3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.430e-20
Identity = 47/83 (56.63%), Postives = 63/83 (75.90%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPP 83
            MAKSIRSKVKKRNR +MRK  G+PH +++QA+CTA++Q++V + +G  + KLKG+L  AQA NP   EVSK   +F+HP A P
Sbjct:    1 MAKSIRSKVKKRNRADMRKQYGEPHAQQIQAKCTARLQETVQYHSGPGINKLKGLLNKAQAENPLQPEVSKHSHTFKHPYAKP 83
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDQ5_9PHAE3.820e-7189.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0M3_ECTSI9.930e-6694.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z2D3_9STRA4.430e-2056.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..180
IPR019434Uncharacterised protein family UPF0642PFAMPF10338DUF2423coord: 1..41
e-value: 1.5E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:451760..454877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17825.1mRNA_Ecto-sp6_S_contig87.17825.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 450864..454877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17825.1 ID=prot_Ecto-sp6_S_contig87.17825.1|Name=mRNA_Ecto-sp6_S_contig87.17825.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=191bp
MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVT
KLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPLFDDDNDEATAPAPSPS
RNARGRTRGRARSLSDAEASMVDEDTAMGDAGEEDAGGGPAGGGGGDGVS
GGAKGGEGGRNTASELAAKLKKKRRQAKRRNYVEFSAHEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019434UPF0642