prot_Ecto-sp6_S_contig87.17790.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig87.17790.1
Unique Name	prot_Ecto-sp6_S_contig87.17790.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	968

Homology

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BLAST of mRNA_Ecto-sp6_S_contig87.17790.1 vs. uniprot
Match: A0A6H5KT36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT36_9PHAE)

HSP 1 Score: 649 bits (1674), Expect = 6.740e-216
Identity = 740/985 (75.13%), Postives = 754/985 (76.55%), Query Frame = 0

Query:    1 MTGANKCLFGEGKEHCLKHRMYAFPGEKAQFCSSHKMPGMVDVHNKRCEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQWLTSKTVRRTANHEPGSESAPGRTSAKKRQKTSRGAKGGSKASGNGRRSSGRAAXXXXXXXXXXXXXXXXXX------ASAFQQPDLLDWLPGGEDDASSASRGGVKRKLSKAAGGEVRPGPSSRGARASGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGASSPGGRGRAGXRGRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIKPKLEPRMYDDRVGGGPEGSGGGG-----DTLSHLGGATAAGTFMGGRSGVEELQRVGDGGXXXXXXXXXXGRGDRLHEGGGSFRRGGDGGMPDGAAAGHGPPQGSGADVDMGVGASFLNLSPPSEKSTMHRGHRRLASFDPNTDCFSHFNYLVGGGSDGGGALAEASRRGLFFQPVGAAEGQGYTLPPRGGGSVSSLGSFGGSFGSFGXXXXRRHHRGMSSGSVDLNVLAPVLAELRASGGGSIGGIQAYPALWYPPSGDAXXXXXXXXXXXXXXXXXHREETFLHSPRDCGNGTSDGSRGRQXXXXXXXXXXXXXXXXXXXXXXXXXXX-------ASTLSLPVVAEPGTPPHILSDDAASSATNGLSPGKLTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYSQFFLSMXXXXXXXXXRQREGRIGAPVHAEAQRAFTGDGHLLRNASSVGGRRRPTHEDDYAASARHEGRGYGHREELEGAVWIKHPAARTSLHPGQSMGGADQHGXXXXXXXXXXXXXXXXXXXXXXALPRRQW 967
            MTGANKCLFGEGKEHCLKHRMYAFPGEKAQFCSSHKMPGMVDVHNKRCEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EQWLTSKTVRRTANHE GSESAP                                 XXXXXXXXXXXXXXXXXX      ASAF+QPDLLDW PGGEDDASSASR GVKRKLSKA GGEV PGP+SRG RASGNG        XXXXXX                          XXXXXXXXXXXXX           A  RGRRP                            GEIKPKL PRMYD  VGGGPEGS         D LSHLGGATAA TFM GRSGVEELQRVGDGG          GRGD LHEGGGSFRRGGDGGMPD    G      SGADVDMGVG SFLNLSPPSEKST+HRGHRRLASFDPNTDCFSHFNYL G GS+GGGALAEASRRGLFFQPVGAAEGQGY+LPPRGGGS+SS GSFGGS+GSFGXXXXRRHHRGMSSGSVDLNVLAPVLAELRASGGGSIGGIQAY A  +PPSGDAXXXXXXXXXXXXXXXXX                         XXXXXXXXXXXXXXXXXXXXXXXX          ASTLSLPVVAEPGTPPHILSDDAASSATNGLSP KLT        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXRQRE RIGAPVHAEAQRAFTGDGHLLRNASS+G RRRPT EDDYA SAR+EG G+GHREELE AVWIK  AAR S H GQS+GGA QHGXXXXXXXXXXXXXXXXXXXX  +LP+RQW
Sbjct:    1 MTGANKCLFGEGKEHCLKHRMYAFPGEKAQFCSSHKMPGMVDVHNKRCEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQWLTSKTVRRTANHEAGSESAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQASAFRQPDLLDWSPGGEDDASSASREGVKRKLSKAGGGEVSPGPTSRGGRASGNGGGVSLLSAXXXXXXTAADCVRRRGALGSGGGADAEEAAASXXXXXXXXXXXXXXXX--------ARERGRRPAARGDNGDKNGAFFTAASDAAAAAYGGRGEIKPKLGPRMYDGCVGGGPEGSXXXXXXXXXDMLSHLGGATAAETFMRGRSGVEELQRVGDGGGGRRR-----GRGDYLHEGGGSFRRGGDGGMPDDDLTG------SGADVDMGVGGSFLNLSPPSEKSTIHRGHRRLASFDPNTDCFSHFNYLGGSGSNGGGALAEASRRGLFFQPVGAAEGQGYSLPPRGGGSISSPGSFGGSYGSFGXXXXRRHHRGMSSGSVDLNVLAPVLAELRASGGGSIGGIQAYLAHGHPPSGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDEQHEHNRSASTLSLPVVAEPGTPPHILSDDAASSATNGLSPRKLT--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQREERIGAPVHAEAQRAFTGDGHLLRNASSMGERRRPTPEDDYATSARYEGGGHGHREELEDAVWIKQRAARASFHLGQSVGGAVQHGXXXXXXXXXXXXXXXXXXXXA-SLPQRQW 957

[Close]

BLAST of mRNA_Ecto-sp6_S_contig87.17790.1 vs. uniprot
Match: D8LQW3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW3_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 1.100e-186
Identity = 378/475 (79.58%), Postives = 382/475 (80.42%), Query Frame = 0

Query:  148 EQWLTSKTVRRTANHEPGSESAPGRTSAKKRQKTSRGAKGGSKASGNGRRSSGRAAXXXXXXXXXXXXXXXXXXASAFQQPDLLDWLPGGEDDASSASRGGVKRKLSKAAGGEVRPGPSSRGARASGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGASSPGGRGRAGXRGRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIKPKLEPRMYDDRVGGGPEGSGGGG---DTLSHLGGATAAGTFMGGRSGVEELQRVGDGGXXXXXXXXXXGRGDRLHEGGGSFRRGGDGGMPDGAAAGHGPPQGSGADVDMGVGASFLNLSPPSEKSTMHRGHRRLASFDPNTDCFSHFNYLVGGGSDGGGALAEASRRGLFFQPVGAAEGQGYTLPPRGGGSVSSLGSFGGSFGSFGXXXXRRHHRGMSSGSVDLNVLAPVLAELRASGGGSI 619
            EQWLTSKT+RRTANHEPGSESAPGRTSAKKRQK SRGAKGGSKASGNGRRSS RA   XXXXXXXXXXXX    ASAFQQPDLLDW PGGEDDASSASRGGVKRKLSKA GGEVRPGPSSRGARASGNG                              XXXXXXXXXXXXXXXXXXXXXXX     P GRGRAG RGRRP                            GEIKPKLEPRMYDDRVGGG           DTLSHLGGATAA TFMG RSGVE+LQRVGDG  XXXXXXXX GRGDRL+EGGGSFRRGGDGGMPDGAAAGHGPPQGSGADVDMGVGASFLNLSPPSEKSTMHRGHRRLASFDPNTDCFSHFNYLVGGGSDGGGALAEASRRGLFFQPVGAAEGQGYTLPPRGGGSVSSLGSFGGSFGSFGXXXXRRHHRGMSSGSVDLNVLAPVLAELRASGGG +
Sbjct:  112 EQWLTSKTIRRTANHEPGSESAPGRTSAKKRQKNSRGAKGGSKASGNGRRSSDRAVAAXXXXXXXXXXXXHSQ-ASAFQQPDLLDWSPGGEDDASSASRGGVKRKLSKAVGGEVRPGPSSRGARASGNGGGVSLLSADGGAGGGETAVDCVRRRGAQGSXXXXXXXXXXXXXXXXXXXXXXXX---XPEGRGRAGGRGRRPAARGDNADENGAFFAAASDAAAAAFGGRGEIKPKLEPRMYDDRVGGGXXXXXXXXXXXDTLSHLGGATAAETFMGERSGVEQLQRVGDG--XXXXXXXXRGRGDRLYEGGGSFRRGGDGGMPDGAAAGHGPPQGSGADVDMGVGASFLNLSPPSEKSTMHRGHRRLASFDPNTDCFSHFNYLVGGGSDGGGALAEASRRGLFFQPVGAAEGQGYTLPPRGGGSVSSLGSFGGSFGSFGXXXXRRHHRGMSSGSVDLNVLAPVLAELRASGGGCV 580

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig87.17790.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig87.17790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KT36_9PHAE	6.740e-216	75.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQW3_ECTSI	1.100e-186	79.58	EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 681..701

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig87	contig	Ecto-sp6_S_contig87:139723..150949 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig87.17790.1	mRNA_Ecto-sp6_S_contig87.17790.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig87 139723..150949 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17790.1 ID=prot_Ecto-sp6_S_contig87.17790.1|Name=mRNA_Ecto-sp6_S_contig87.17790.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=968bp
MTGANKCLFGEGKEHCLKHRMYAFPGEKAQFCSSHKMPGMVDVHNKRCEA
EDCQKHPTYGIANGRARFCTKHKGPDMVDVHCRPCEFLGCSKHPHYAFEG
DKARFCASHKEPGMVDVKHKRCHKTGCREMRVYETPEKKSRFCAMHLEQW
LTSKTVRRTANHEPGSESAPGRTSAKKRQKTSRGAKGGSKASGNGRRSSG
RAAAAATETATAAAAAAAQSQASAFQQPDLLDWLPGGEDDASSASRGGVK
RKLSKAAGGEVRPGPSSRGARASGNGGGVSLLSADGGGGGGGETAADCVR
RRGQQGSGGGGDAEEAAASGSGGGGGGGGHGASSPGGRGRAGGRGRRPAA
RGDNGDENGAFFAVASDAGAAAFGGRGEIKPKLEPRMYDDRVGGGPEGSG
GGGDTLSHLGGATAAGTFMGGRSGVEELQRVGDGGGGGDGGGRRRGRGDR
LHEGGGSFRRGGDGGMPDGAAAGHGPPQGSGADVDMGVGASFLNLSPPSE
KSTMHRGHRRLASFDPNTDCFSHFNYLVGGGSDGGGALAEASRRGLFFQP
VGAAEGQGYTLPPRGGGSVSSLGSFGGSFGSFGGGGGRRHHRGMSSGSVD
LNVLAPVLAELRASGGGSIGGIQAYPALWYPPSGDAAAAAAAQPQQYTQP
PPPHREETFLHSPRDCGNGTSDGSRGRQEQQQQQQQQYQRLMEEQHQHQH
QHQRSASTLSLPVVAEPGTPPHILSDDAASSATNGLSPGKLTPSSSTTPT
AVAAGVSGGGAGGAAAMPHNGGKAAGGGVEASVGGDGDAAAINAGHRRSH
DLSGGGGGGGGGGGGGGGGGGGGGGDDAIRREYSQFFLSMAGGGPSGGGR
QREGRIGAPVHAEAQRAFTGDGHLLRNASSVGGRRRPTHEDDYAASARHE
GRGYGHREELEGAVWIKHPAARTSLHPGQSMGGADQHGGGGGGMLLPPRA
GAPQSAAAAAALPRRQW*