prot_Ecto-sp6_S_contig87.17788.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17788.1
Unique Nameprot_Ecto-sp6_S_contig87.17788.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length526
Homology
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 791 bits (2042), Expect = 3.090e-284
Identity = 475/556 (85.43%), Postives = 478/556 (85.97%), Query Frame = 0
Query:    1 MSGRTMPFQFHTRRPSAVVRQSGPGRSTLHVDLAAGGXXXXXXXXXXXXGAGRGRGXXXWRGRRGWWGSSRRLPDFLEFWGFATPVSEDERLRREREXXXXXHRRRGLAGSCVRSPEFSIFVLGLASLLAFIVFICDMITGRRLRPTSVLVFVAAGTYCLALIKQQRDLAASEQALVIEIMDGSATSSSRRVISKEDRRNLFDYFTFRPSSSTNKGVRTAATATQTDKDVEVSAMEQGTAAPTAXXXXXXXXXXXXGEVSGGGIRSDREDEAGSPRPCSLPSPLGLSAPTRGPRGAGSDTAAPPSPVQPRATPPVSPSALALAGTLQGEGAAAAVGGVADDGT------AEVLG--------GV-----------------EVASGRDEGESAIRGSCCGGGVADSDGAXXXXSGSKPSVAGPEKRLPPEGEELDDKEVPERGMTGGLSELWSSGESCIICFGEYVEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNSSDNDEIDGAGGTNATTTSGDSNAEWLGSPAPAAGAATVGDEAV 525
            MSGRTMPFQFHTRRPSAVVRQSGPGRSTLHVDLAAG XXXXXXXXXXXX       XXX       WGSSRRLPDFLEFWGFA  V EDERLRREREXXXXXHRRRGLAGSCVRSPEFSIFVLGLA+LLAFIVFICDMITGRRLRPTSVLVFVAAGTYCLALIKQQRDLAASEQALVIEIMDGSATSSSRRVISKEDRRNLFDYFTFR SSSTNKGV TAATATQTDKD EVSAMEQGTAAPTAXXXXXXXXXXXX    GGG  SDREDEAGSPRPCSLPSPLGLSAPTRGPRGAGSDTAAPPSP QP ATPPVSPSALALAGTLQGEGAAAAVGGVAD          EV+G        GV                  VA GRDEGESAIRGSCCGGGVADSD +    SGSKPSVAGPEKR PPEGEE DDKEVPERGMTGGLSELWSSGESCIICFGEY EGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRN SDNDEI GAGGTNATTTS DSNAEWLGS APAAGAATVGDEAV
Sbjct:    1 MSGRTMPFQFHTRRPSAVVRQSGPGRSTLHVDLAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGSSRRLPDFLEFWGFAAAVPEDERLRREREXXXXXHRRRGLAGSCVRSPEFSIFVLGLAALLAFIVFICDMITGRRLRPTSVLVFVAAGTYCLALIKQQRDLAASEQALVIEIMDGSATSSSRRVISKEDRRNLFDYFTFRRSSSTNKGVWTAATATQTDKDAEVSAMEQGTAAPTAXXXXXXXXXXXXXXXXGGGDTSDREDEAGSPRPCSLPSPLGLSAPTRGPRGAGSDTAAPPSPEQPLATPPVSPSALALAGTLQGEGAAAAVGGVADXXXXXXXXXVEVVGVSGKEEGGGVMMLAPSSGAAAGLSPLFSVALGRDEGESAIRGSCCGGGVADSDESGEGGSGSKPSVAGPEKRPPPEGEEFDDKEVPERGMTGGLSELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNGSDNDEIGGAGGTNATTTSADSNAEWLGSSAPAAGAATVGDEAV 556          
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: A0A6H5KVF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF8_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 1.500e-143
Identity = 271/365 (74.25%), Postives = 285/365 (78.08%), Query Frame = 0
Query:    1 MSGRTMPFQFHTRRPSAVVRQSGPGRSTLHVDLAA--GGXXXXXXXXXXXXGAGRGRGXXXWRGRRGWWGSSRRLPDFLEFWGFATPVSEDERLRREREXXXXXHRRRGLAGSCVRSPEFSIFVLGLASLLAFIVFICDMITGRRLRPTSVLVFVAAGTYCLALIKQQRDLAASEQA--LVIEIMDGSATSSSRRVISKEDRRNLFDYFTFRPSSSTNKGVRTAATATQTDKDVEVSAMEQGTAAPTAXXXXXXXXXXXXGEVSGGGIRSDREDEAGSPRPCSLPSPLGLSAPTRGPRGAGSDTAAPPSPVQPRATPPVSPSALALAGTLQGEGAAAAVGGVADDGTAEVLGGVEVA--SGRDEG 359
            MSGRTM FQFHTR PSAVVRQSGP RSTLHVDLAA  G          XXX       XX WRGRRGWWGSSRRLP+FLEFWG A  V E ERLRRERE     H RRG  GSCVRSPEFSIFVLGLA+LLAF+VF CDMI GRRLRPTSVLVFVAAGTYCLAL+KQQRDLAA E+A  LV+E+MDGSATSSSRRVISKEDRRNLFDYFTFR SSS NKG   A TATQTD  ++VS ME+GTAA  A   XXXXXXXXXG VS  G RSDRED++ SPR   LPSPLGL APTRG      DTAAPPSP Q  A  PVSPS LALAGTLQGEGAAAAVGGVADDGT EVLGGVEV   SG+D+G
Sbjct:   26 MSGRTMSFQFHTRGPSAVVRQSGPERSTLHVDLAAADGETTAATGAAAXXXXXXXXXXXXGWRGRRGWWGSSRRLPNFLEFWGLAAAVPEGERLRRERERRERSHNRRGPVGSCVRSPEFSIFVLGLAALLAFMVFFCDMIAGRRLRPTSVLVFVAAGTYCLALLKQQRDLAALERAPALVVEVMDGSATSSSRRVISKEDRRNLFDYFTFRRSSSANKG---AWTATQTDIGIDVSTMEKGTAALAAAPMXXXXXXXXXGGVSVVGDRSDREDKSVSPRSFPLPSPLGLPAPTRGSGXXXXDTAAPPSPEQQLAASPVSPSTLALAGTLQGEGAAAAVGGVADDGTTEVLGGVEVVEVSGKDDG 387          
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 3.900e-85
Identity = 143/179 (79.89%), Postives = 148/179 (82.68%), Query Frame = 0
Query:  353 ASGRDEGESAIRGSCCGGGVADSDGAXXXXSGSKPSVAGPEKRLPPEGEELDDKEVPERGMTGGLSELWSSGESCIICFGEYVEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNSSDNDEIDGAGGTNATTTSGDSNAEWLGSPA------PAAGAATVGDEAV 525
            ASGRDEGESAIRGSCCGGGVA+SD      SGSKPSVAGPEKR P EG E DDK+V ERGMTG LSELWS  ESCIICFGEY EGDVLCRLPCRHTYHAECIDAWLD PGHSWCPLCKSSLL PSEPRNSS+N E    GGTNA+TTS DSNAE LGSPA      PA+GAA VGDEAV
Sbjct:    4 ASGRDEGESAIRGSCCGGGVANSDECGGGGSGSKPSVAGPEKRPPLEGGEFDDKDVRERGMTGRLSELWSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLLLPSEPRNSSENGETADGGGTNASTTSADSNAEQLGSPATAAAATPASGAANVGDEAV 182          
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 2.080e-16
Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 0
Query:  422 SSGESCIICFGEYVEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPS---EPRNSSDNDEIDGAGGTNATT 498
            S+G SCI+CFG+Y  G+ LCRL C H YHA+CID WLDG  H WCPLCK+ ++  S   +P  SS+N+    +G T   T
Sbjct:  247 STGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSNNNNAVRSGITGQDT 326          
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 7.970e-15
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 0
Query:  411 RGMTGGLSELWSSGE-----SCIICFGEYVEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLL 474
            R   GG+    + GE     SCI+CFG+Y  G+ LCRL C H YHA+CID WLDG  H WCPLCK+ ++
Sbjct:  238 RTDAGGVLGEEAKGEGSTRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDII 306          
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 8.150e-15
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 0
Query:  421 WSSGESCIICFGEYVEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSL---LPPSEP 479
            WS+G++CI+CFG+Y  GD L RLPCRH YHA+CID WLD      CPLCK+ L    PP +P
Sbjct:  253 WSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDP 314          
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.940e-14
Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 0
Query:  421 WSSGESCIICFGEYVEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNSSDNDEIDGAGGT 494
            WS+G++CI+CF +Y  GD L RLPCRH YHA+CID WLD      CPLCK+ L   + P + S +    G  GT
Sbjct:  153 WSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDRSRSISTVGGAGT 226          
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 7.230e-13
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 0
Query:  421 WSSGESCIICFGEYVEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSL 473
            WS+G++CI+CFG+Y  GD L  LPCRH YHA+CID WLD      CPLCK+ L
Sbjct:  346 WSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDL 398          
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: A0A8K0G2N6_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0G2N6_9COLE)

HSP 1 Score: 71.6 bits (174), Expect = 1.480e-10
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 0
Query:  423 SGESCIICFGEYVEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLP 475
            S E+C ICFGEYVE  +LC+LPC H YH +CI  W D      CPLC+ S+LP
Sbjct:  169 SDENCAICFGEYVEQQLLCKLPCNHFYHYDCISKWFDE--KYICPLCRMSVLP 219          
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Match: W7TAS2_9STRA (Zinc finger, RING-type n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAS2_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.420e-9
Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  427 CIICFGEYVEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLL 474
            C IC G+Y EG+ LC LPCRHTYH +C++ W+    H+ CPLC   LL
Sbjct:  133 CSICLGDYEEGETLCLLPCRHTYHDDCLNVWISA--HAKCPLCNYDLL 178          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQW5_ECTSI3.090e-28485.43RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KVF8_9PHAE1.500e-14374.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUH7_9PHAE3.900e-8579.89RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LSX3_ECTSI2.080e-1651.25RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE7.970e-1552.17RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI8.150e-1558.06RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE3.940e-1450.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI7.230e-1360.38RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8K0G2N6_9COLE1.480e-1056.60Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
W7TAS2_9STRA3.420e-954.17Zinc finger, RING-type n=1 Tax=Nannochloropsis gad... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 427..469
e-value: 1.1E-5
score: 34.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 426..470
e-value: 2.2E-9
score: 37.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 427..470
score: 11.722
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 403..476
e-value: 2.1E-15
score: 58.1
NoneNo IPR availablePANTHERPTHR45798FAMILY NOT NAMEDcoord: 270..482
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..525
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 141..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..163
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 419..476
NoneNo IPR availableTMHMMTMhelixcoord: 119..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:121257..125906 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17788.1mRNA_Ecto-sp6_S_contig87.17788.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 121257..125906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17788.1 ID=prot_Ecto-sp6_S_contig87.17788.1|Name=mRNA_Ecto-sp6_S_contig87.17788.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=526bp
MSGRTMPFQFHTRRPSAVVRQSGPGRSTLHVDLAAGGGATTAAAGAAAGG
AGRGRGAGGWRGRRGWWGSSRRLPDFLEFWGFATPVSEDERLRRERERRE
RSHRRRGLAGSCVRSPEFSIFVLGLASLLAFIVFICDMITGRRLRPTSVL
VFVAAGTYCLALIKQQRDLAASEQALVIEIMDGSATSSSRRVISKEDRRN
LFDYFTFRPSSSTNKGVRTAATATQTDKDVEVSAMEQGTAAPTAAAAATA
AAADDDGEVSGGGIRSDREDEAGSPRPCSLPSPLGLSAPTRGPRGAGSDT
AAPPSPVQPRATPPVSPSALALAGTLQGEGAAAAVGGVADDGTAEVLGGV
EVASGRDEGESAIRGSCCGGGVADSDGAGGGGSGSKPSVAGPEKRLPPEG
EELDDKEVPERGMTGGLSELWSSGESCIICFGEYVEGDVLCRLPCRHTYH
AECIDAWLDGPGHSWCPLCKSSLLPPSEPRNSSDNDEIDGAGGTNATTTS
GDSNAEWLGSPAPAAGAATVGDEAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD