prot_Ecto-sp6_S_contig87.17780.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17780.1
Unique Nameprot_Ecto-sp6_S_contig87.17780.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length306
Homology
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BLAST of mRNA_Ecto-sp6_S_contig87.17780.1 vs. uniprot
Match: D8LQX4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX4_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 2.830e-92
Identity = 273/301 (90.70%), Postives = 275/301 (91.36%), Query Frame = 0 
Query:    5 AGADVEAVNPNGRTPLHLAAAEGNCSAARLLLEAGARPAPPCRYDXXXXXXXXXXXXXXXXXXXXXXXXAPAGSVKPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKRNVMGWGALESVYLARTPGDRPFTAAAVDGDDEWEQEAMSEEELEQRHLQNIAFLLYRAPGSGARARSWRWPRRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPAWTENNXXXXXXXAKAGVRGLACRAEWKRHGSGGQRSRTVTATMLRR 305
            AGADVEAVNPNGRTPLHLAAAEGNCSAARLLLEAGARPAPPCRYDXXXXXXXXXXXXXXXXXXXXXXXXAPAGSVKPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SKRNVMGW ALESVYLARTPGDRPFTAAAVD D+EWEQEAMSEEELEQRHLQNIAFLLYRAPGSGARARSWRWPRRSG             XXXXXXXXXXXXXXXXXXX   RAPAWTEN+       AKAGVRGLACRAEWKRHGSGGQRSRTVTATMLRR
Sbjct:  116 AGADVEAVNPNGRTPLHLAAAEGNCSAARLLLEAGARPAPPCRYDXXXXXXXXXXXXXXXXXXXXXXXXAPAGSVKPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRNVMGWRALESVYLARTPGDRPFTAAAVDCDNEWEQEAMSEEELEQRHLQNIAFLLYRAPGSGARARSWRWPRRSGGGMGVSALNKRQQXXXXXXXXXXXXXXXXXXXGT-RAPAWTENSRGAAAAAAKAGVRGLACRAEWKRHGSGGQRSRTVTATMLRR 415
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BLAST of mRNA_Ecto-sp6_S_contig87.17780.1 vs. uniprot
Match: A0A6H5KTN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN1_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 1.510e-89
Identity = 282/307 (91.86%), Postives = 287/307 (93.49%), Query Frame = 0 
Query:    1 MLLEAGADVEAVNPNGRTPLHLAAAEGNCSAARLLLEAGARPAPPCRYDXXXXXXXXXXXXXXXXXXXXXXXXAPAGSVKPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKRNVMGWGALESVYLARTPGDRPFTAAAVDGDDEWEQEAMSEEELEQRHLQNIAFLLYRAPGSGARARSWRWPRRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPAWTENNXXXXXXX--AKAGVRGLACRAEWKRHGSGGQRSRTVTATMLRR 305
            MLLEAGADVEAVNPNGRTPLHLAAAEGNCS ARLLLEAGARPAPPCRYDXXXXXXXXXXXXXXXXXXXXXXXXAP GSVKPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKRNV+GWGALESVYLARTPGDRPF AA VD DDEWEQ++M+EEELEQRHLQNIAFLLYRAPGSGARARSWRWPRRSG        XXXXXXXXXXXXXXXXXXXXXX     RAPAWTEN+XXXXXXX  AKAGVRGLACRAEWKRHGSGGQRSRTVTATMLRR
Sbjct:  230 MLLEAGADVEAVNPNGRTPLHLAAAEGNCSTARLLLEAGARPAPPCRYDXXXXXXXXXXXXXXXXXXXXXXXXAPVGSVKPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKRNVLGWGALESVYLARTPGDRPFAAAVVDCDDEWEQQSMNEEELEQRHLQNIAFLLYRAPGSGARARSWRWPRRSGGGMGFAALXXXXXXXXXXXXXXXXXXXXXXT----RAPAWTENSXXXXXXXXXAKAGVRGLACRAEWKRHGSGGQRSRTVTATMLRR 532
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQX4_ECTSI2.830e-9290.70Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KTN1_9PHAE1.510e-8991.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..253
NoneNo IPR availablePANTHERPTHR24184FAMILY NOT NAMEDcoord: 50..146
coord: 1..153
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 50..65
score: 47.92
coord: 98..112
score: 31.46
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 49..78
e-value: 5.5E-5
score: 32.6
coord: 115..144
e-value: 0.0068
score: 25.6
coord: 82..113
e-value: 0.097
score: 21.8
coord: 15..46
e-value: 8.4E-4
score: 28.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 115..147
score: 11.541
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 82..114
score: 13.384
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 49..81
score: 12.583
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 15..40
score: 12.583
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 47..214
e-value: 1.2E-31
score: 112.0
coord: 1..46
e-value: 2.0E-12
score: 48.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..155
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 80..145
e-value: 6.5E-10
score: 39.5
coord: 2..74
e-value: 3.2E-15
score: 56.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..147
score: 49.817

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:66826..68295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17780.1mRNA_Ecto-sp6_S_contig87.17780.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 66826..68295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17780.1 ID=prot_Ecto-sp6_S_contig87.17780.1|Name=mRNA_Ecto-sp6_S_contig87.17780.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=306bp
MLLEAGADVEAVNPNGRTPLHLAAAEGNCSAARLLLEAGARPAPPCRYDG
STPLHCAAERGHYEIAELLVKAGAPAGSVKPNGTTPLHMAAQGNNSCVLR
LLVRAGAPLNPENRHGSTPLMTAAAHGNARALSALVSAGADTSKRNVMGW
GALESVYLARTPGDRPFTAAAVDGDDEWEQEAMSEEELEQRHLQNIAFLL
YRAPGSGARARSWRWPRRSGGGMGVAALNKRRRQQQQQQQQQQQQQEKQE
KQKGARAPAWTENNRGAAAAAAKAGVRGLACRAEWKRHGSGGQRSRTVTA
TMLRRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom