prot_Ecto-sp6_S_contig86.17730.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig86.17730.1
Unique Nameprot_Ecto-sp6_S_contig86.17730.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length257
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: A0A6H5KXT9_9PHAE (cwf21 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT9_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 1.630e-105
Identity = 245/249 (98.39%), Postives = 245/249 (98.39%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGASANE 249
            MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASL KGKKG GAGGG G MDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGASANE
Sbjct:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLPKGKKGTGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGASANE 249          
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: D7G1H6_ECTSI (cwf21 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H6_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 6.770e-101
Identity = 241/250 (96.40%), Postives = 241/250 (96.40%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGGGAGGG-TGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGASANE 249
            MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKG        G MDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGASANE
Sbjct:   32 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGXXXXXXXAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGASANE 281          
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: A0A836CB89_9STRA (cwf21 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB89_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.210e-39
Identity = 95/173 (54.91%), Postives = 114/173 (65.90%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNT---GKLQARDWEEPPP--RKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 168
            MYN +G+ TPRGSGTSGHVMSNRSHV+A   R  + RN    G  QA  W  P    +KAN+ELL+H R+RKVEAKIFELQEAMA+RGYSDA+IE KVAEVR+ L+ R        L +  KG G         +H+    KA +N RMR+AFGLG DY  GE+FD E Q +K
Sbjct:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQA--WAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPE--KGSG---------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKK 160          
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: A0A7S3Y519_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y519_HETAK)

HSP 1 Score: 112 bits (281), Expect = 2.450e-27
Identity = 66/165 (40.00%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQ 165
            MYN +G+ T RGS T+G+V  N SHVR Q  R  + +N G LQ  DW+ P  ++AN+ +L+HQ+KR++EAK+FELQ  + D G ++ EI++K   +RK L     S +   + +G              +H R   K +++RR+R AFG+ +D+ AG AFD E Q
Sbjct:    1 MYNGIGLATVRGSSTNGYVQRNLSHVRTQQVRNQVAQNKGGLQ--DWDAPKQKQANKAILEHQQKRQIEAKVFELQVQLEDEGLNEEEIDKKCQALRKKLNS---SAKPQQIHEG-------------GTHARAALKEEEDRRLRAAFGIREDFVAGAAFDPELQ 147          
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: A0A7R9UG21_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG21_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.800e-25
Identity = 68/169 (40.24%), Postives = 102/169 (60.36%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPR-KANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 168
            MY NVG++T RGSGT+G+V  NR ++R Q FR  +  NT      D    P R +A+ ELL+H RKR +EAK+FE +  + D G  D +IEE++ ++R  LE    SG + S            G+   +SH+R  +KA + RR+++AF + +DY  G+AFD EA+E++
Sbjct:    1 MYGNVGLKTARGSGTNGYVQRNRGYLRPQKFRARVRDNTQATPFSDPISAPLRAEADAELLEHSRKRAIEAKLFEERVRLEDDGLEDEKIEERLKKMRASLERS--SGARGSF-----------GSEGTNSHVRAARKAQERRRLKDAFRIREDYVEGQAFDREAREQE 156          
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: G4Z8N6_PHYSP (cwf21 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z8N6_PHYSP)

HSP 1 Score: 103 bits (258), Expect = 4.470e-23
Identity = 70/180 (38.89%), Postives = 99/180 (55.00%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWE-------EPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGL-----EEREGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 168
            MYN +G+RT RGSGT+G+V  N S+V A   R  + RN     + D+         PPP   N ++L H++KRKVE ++ E+   M DRG    EI+EKV   R+ L     E  +  G+KA                A  SH R  +K ++N+R+++AFG+  DY AGE+FD EAQER+
Sbjct:    1 MYNGIGLRTVRGSGTNGYVQRNLSYVNASRTRQTLARNQRGGASGDFGAHRGGKGRPPP---NADILLHEQKRKVELQLLEISLEMEDRGCDPEEIQEKVKRERERLLARLNEASDRGGEKAK--------------DAESSHARQKRKEEENKRIKDAFGIATDYVAGESFDPEAQERR 163          
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: A0A4D9CSM3_9STRA (cwf21 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSM3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.780e-22
Identity = 64/169 (37.87%), Postives = 104/169 (61.54%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARD-WEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 168
            MYN +G++T RGS TSG+V  NR +V  +  R      +G    +D ++     KAN+E+L+H+RKR++EA+++E++E M D+GYS++EI++K   +R+ L+     G   +L+   K G   GG+   D+H    +KA +  R+R AFG+  D+  GE +D EAQ R+
Sbjct:    1 MYNGIGLQTARGSATSGYVTKNRGYVPPRRVRQETALVSGHGGPQDTFKAAVLAKANQEILEHKRKRQIEAQVYEMEERMRDQGYSESEIKDKATALRERLK-----GNNLALVAANKTGS--GGSEMTDTHEVAARKAQEIERLRNAFGIAQDHVEGETWDPEAQNRR 162          
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: A3KNE2_XENLA (cwf21 domain-containing protein (Fragment) n=1 Tax=Xenopus laevis TaxID=8355 RepID=A3KNE2_XENLA)

HSP 1 Score: 99.4 bits (246), Expect = 7.240e-22
Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEER------EGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFD 161
            MYN +G+ TPRGSGT+G+V  N S VR +  R        + + +  E    +K N+++LDH+RKRKVE K  EL+E MA++GY+DAEI+EKVA  R  L+E+      E   QKA++                ++H         N R+R AFG+ D Y  G +FD
Sbjct:    1 MYNGIGLTTPRGSGTNGYVQRNLSSVRHKKDRTDYK---SEEELKKLENLLMKKPNQDILDHERKRKVELKCLELEEMMAEQGYNDAEIQEKVATFRLMLQEKDLTQIKEEEKQKANV---------------SETHQMAEANEKKNERLRAAFGISDSYVDGSSFD 149          
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: A0A225WFR0_9STRA (cwf21 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFR0_9STRA)

HSP 1 Score: 101 bits (251), Expect = 5.530e-21
Identity = 68/172 (39.53%), Postives = 97/172 (56.40%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRN----TGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 168
            MYN +G+RT RGSGT+G+V  N S+V A   R  + RN         AR  +  PP   N E+L H++KRKVE ++ E+   M +RG    EI+EKV   R+ L  R  +G KA   K +             SH R  +K ++N+R+++AFG+  DY AGE+FD E QE++
Sbjct:    1 MYNGIGLRTVRGSGTNGYVQRNLSYVNASRSRQTLARNQRGGASDFNARGGKSRPP--PNAEILLHEQKRKVEVQLLEMSLEMEERGCDPEEIQEKVKRERERLLARL-NGAKAEKSKDE------------SSHARQRRKEEENKRIKDAFGITTDYVAGESFDPEMQEKR 157          
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Match: A0A674HKV0_TAEGU (cwf21 domain-containing protein n=1 Tax=Taeniopygia guttata TaxID=59729 RepID=A0A674HKV0_TAEGU)

HSP 1 Score: 96.7 bits (239), Expect = 8.760e-21
Identity = 65/162 (40.12%), Postives = 85/162 (52.47%), Query Frame = 0
Query:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEER-EGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFD 161
            MYN +G+ TPRGSGT+G+V  N S +R +    G D   G+ + R  E    +K N ++LDHQRKR+VE K  EL E M ++GYS  EIE KVA  R  L E+ EG G                   A ++H         N R+R AFG+ D Y  G AF+
Sbjct:    1 MYNGIGLPTPRGSGTNGYVQRNLSALRPKKGGAGADPPPGEEELRRLEAALAKKPNADILDHQRKRRVELKCLELAELMEEQGYSAEEIEAKVATFRTMLLEKDEGPGDPEQKPT------------ATETHQLAEANERKNERLRAAFGISDSYVDGSAFE 150          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXT9_9PHAE1.630e-10598.39cwf21 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G1H6_ECTSI6.770e-10196.40cwf21 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CB89_9STRA1.210e-3954.91cwf21 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S3Y519_HETAK2.450e-2740.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9UG21_9STRA1.800e-2540.24Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
G4Z8N6_PHYSP4.470e-2338.89cwf21 domain-containing protein n=1 Tax=Phytophtho... [more]
A0A4D9CSM3_9STRA2.780e-2237.87cwf21 domain-containing protein n=2 Tax=Monodopsid... [more]
A3KNE2_XENLA7.240e-2238.92cwf21 domain-containing protein (Fragment) n=1 Tax... [more]
A0A225WFR0_9STRA5.530e-2139.53cwf21 domain-containing protein n=1 Tax=Phytophtho... [more]
A0A674HKV0_TAEGU8.760e-2140.12cwf21 domain-containing protein n=1 Tax=Taeniopygi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..184
NoneNo IPR availablePANTHERPTHR36562FAMILY NOT NAMEDcoord: 1..254
NoneNo IPR availablePANTHERPTHR36562:SF5SERINE/ARGININE REPETITIVE MATRIX 2coord: 1..254
IPR013170mRNA splicing factor Cwf21 domainSMARTSM01115cwf21_2coord: 60..105
e-value: 1.6E-8
score: 44.4
IPR013170mRNA splicing factor Cwf21 domainPFAMPF08312cwf21coord: 60..102
e-value: 1.2E-11
score: 44.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig86contigEcto-sp6_S_contig86:202765..208320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig86.17730.1mRNA_Ecto-sp6_S_contig86.17730.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig86 201582..209635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig86.17730.1 ID=prot_Ecto-sp6_S_contig86.17730.1|Name=mRNA_Ecto-sp6_S_contig86.17730.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=257bp
MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEP
PPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGL
EEREGSGQKASLLKGKKGGGAGGGTGAMDSHMRDVKKADDNRRMREAFGL
GDDYAAGEAFDEEAQERKKEARRKEREAKDKEWEEKKAAKKAEEKKEKRR
REKAGSDDDQDGQERGARKGGSRRGDSQEAERDSMMAKRAERFGASANER
RRRREG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013170mRNA_splic_Cwf21_dom