prot_Ecto-sp6_S_contig86.17713.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig86.17713.1
Unique Nameprot_Ecto-sp6_S_contig86.17713.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length181
Homology
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BLAST of mRNA_Ecto-sp6_S_contig86.17713.1 vs. uniprot
Match: A0A6H5KT30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT30_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 3.500e-22
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 0 
Query:  116 STRQGFLKAGGLAAAGVIAAMGAVPGTIVEGRGRAVEMAEAAVGVDEPAVLLQKEASPDLEGTSG 180
            STRQGFLKAGGLAAAGVIAAMGAVPGTIVEGRGRA+E AEAA+GVDEPAV  QKEASP+LE TSG
Sbjct:   13 STRQGFLKAGGLAAAGVIAAMGAVPGTIVEGRGRALETAEAAIGVDEPAVF-QKEASPNLELTSG 76
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BLAST of mRNA_Ecto-sp6_S_contig86.17713.1 vs. uniprot
Match: D7G1J0_ECTSI (Choline/ethanolamine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J0_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 7.860e-20
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0 
Query:  116 STRQGFLKAGGLAAAGVIAAMGAVPGTIVEGRGRAVEMAEAAVGVDEPAVLLQKE 170
            STRQGFLKAGGLAAA VIAAMGAVPGTIVEGRGRAVEM EAAVGVDEPAVLLQKE
Sbjct:   22 STRQGFLKAGGLAAAXVIAAMGAVPGTIVEGRGRAVEMVEAAVGVDEPAVLLQKE 76
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KT30_9PHAE3.500e-2289.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1J0_ECTSI7.860e-2096.36Choline/ethanolamine kinase n=1 Tax=Ectocarpus sil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig86contigEcto-sp6_S_contig86:34369..36078 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig86.17713.1mRNA_Ecto-sp6_S_contig86.17713.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig86 34369..36078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig86.17713.1 ID=prot_Ecto-sp6_S_contig86.17713.1|Name=mRNA_Ecto-sp6_S_contig86.17713.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=181bp
QVLAAAAVLVHLPACLVRGYTAIPPPSLPRGGLSERAAGAGERYDGAGRA
WRDAHRRAAQLTDLVRPGQHQSLSLSLSPSSGDDRVSSGGKTSTTTTTIT
TTTTTTGGQYYRGGSSTRQGFLKAGGLAAAGVIAAMGAVPGTIVEGRGRA
VEMAEAAVGVDEPAVLLQKEASPDLEGTSG*
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