prot_Ecto-sp6_S_contig86.17711.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig86.17711.1
Unique Name	prot_Ecto-sp6_S_contig86.17711.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	589

Homology

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BLAST of mRNA_Ecto-sp6_S_contig86.17711.1 vs. uniprot
Match: D7G1J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J1_ECTSI)

HSP 1 Score: 856 bits (2211), Expect = 8.820e-310
Identity = 479/591 (81.05%), Postives = 481/591 (81.39%), Query Frame = 0

Query:    1 MAPPKLAMRNQAVQAVGEKYFQVALVGLATAGVLAIVAVSIGSTRGMFEFTIDRCDCLLTSGVEDAVAQGAECVPGQDYMGVDIGWKSFVIDKAYSTEGCLDGWEGTKDIGSPFGDGIYKKKSAVYGNGATGAADASVGLFVVSAFIAIIMFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLGDMESSLAATLFMATLDVCEDDWDTVGFPVGE--SEEIFCQGKPWNFEVPLYAGWTAIAHVAVMLLTSVWILSKSGLVEGILDGSKLVGGKAVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKM-GGSPKHTKDNTLRTGESAGVRPKIALGGDIEGQATGGHNLSSPGPVQSIPRATGAPGSKVDTKAAKXXXXXXXXXXXLPGKPGGXXXXXXXXXXEEEVSPAIRSSGPWDRDGEESGSYGDVETDSSVGSVARSPASVVSGKGHEKTRSEIDWGRIMDAGDNDGTAKQYDDGDEDDDSPHLSSVMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV 588
            MAPPKLAMRNQAVQAVGEKYFQVAL                                                        VDIGWKSFVIDKAYSTEGCLDGWEGTKDIGSPFGDGIY+KKSAVYGNGATGAADASVGLFVVSAFIAIIMFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLGDMESSLAATLFMATLDVCEDDWDTVGFPVGE  SEEIFCQ KPWNFEVPLYAGWTAIAHVAVM LTSVWIL+KSGLVEGILDGSKLVGGKAVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKM GGSPKHTKDNTLRTGE AGVRPKIALGGDIEGQATGGHNLSSPGPVQSIPRATGAPGSK  T    XXXXXXXXXXXLPGKPGGXXX       EEEVSPAIRSS                                  GKGH KTRSEIDWGRIMDAGDNDGTAKQYDDGDEDDDSPHLSSVMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV
Sbjct:    1 MAPPKLAMRNQAVQAVGEKYFQVAL--------------------------------------------------------VDIGWKSFVIDKAYSTEGCLDGWEGTKDIGSPFGDGIYRKKSAVYGNGATGAADASVGLFVVSAFIAIIMFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLGDMESSLAATLFMATLDVCEDDWDTVGFPVGEGESEEIFCQAKPWNFEVPLYAGWTAIAHVAVMFLTSVWILTKSGLVEGILDGSKLVGGKAVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKMQGGSPKHTKDNTLRTGERAGVRPKIALGGDIEGQATGGHNLSSPGPVQSIPRATGAPGSKAATXXXXXXXXXXXXXXXLPGKPGGXXXRSASAS-EEEVSPAIRSS---------------------------------IGKGHGKTRSEIDWGRIMDAGDNDGTAKQYDDGDEDDDSPHLSSVMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV 501

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BLAST of mRNA_Ecto-sp6_S_contig86.17711.1 vs. uniprot
Match: A0A6H5L9G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G0_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 5.170e-155
Identity = 277/387 (71.58%), Postives = 281/387 (72.61%), Query Frame = 0

Query:  261 MLLTSVWILSKSGLVEGILDGSKLVGGKAVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKMGGSPKHTKDNTLRTGESAGVRPKIALGGDIEGQATGGHNLSSPGPVQSIPRATGAPGSKVDTKAAKXXXXXXXXXXXL----------PGKPGGXXXXXXXXXXEEEVSPAIRSSG-------------------------------------------------PWDRDGEESGSYGDVETDSSVGSVARSPASVVSGKGHEKTRSEIDWGRIMDAGDNDGTAKQYDDGDEDDDSPHLSSVMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV 588
            M LTSVWILSKSGLVEGILDGSKLV GKAVT        AVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAE LVSPLRKMGGSPKHTK+NTLRTGESAGVRP IALG DIEGQA GGHNLSSPGPV+SIPRA  AP SK  T    XXXXXXXXXXX           PG  GG          EEEVSPAIRSSG                                                 PWDRD       GDVETDSS+G+VARSPASVVSGKGHEKTRSEIDWGRIMDAG NDGTAK YDDGDEDDDSPHLSS MLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPK RGSATHFEV
Sbjct:    1 MFLTSVWILSKSGLVEGILDGSKLVDGKAVT--------AVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEVLVSPLRKMGGSPKHTKNNTLRTGESAGVRPNIALGADIEGQAPGGHNLSSPGPVESIPRAAVAPASKAATXXXXXXXXXXXXXXXXXXXXXXXXXXPGGEGGRSASAS----EEEVSPAIRSSGSSGRTLNRRAHAMGIKPQSSMTSHHIIRRRQITMVNRDHVSTSKYHNKGPWDRDA------GDVETDSSLGNVARSPASVVSGKGHEKTRSEIDWGRIMDAGHNDGTAKSYDDGDEDDDSPHLSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKARGSATHFEV 369

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig86.17711.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig86.17711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G1J1_ECTSI	8.820e-310	81.05	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L9G0_9PHAE	5.170e-155	71.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 193..248
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 173..192
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 132..152
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 270..588
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 42..131
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 249..269
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 153..172
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..41
None	No IPR available	TMHMM	TMhelix		coord: 170..192
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 128..150
None	No IPR available	TMHMM	TMhelix		coord: 248..270

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig86	contig	Ecto-sp6_S_contig86:12383..22402 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig86.17711.1	mRNA_Ecto-sp6_S_contig86.17711.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig86 12383..22402 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig86.17711.1 ID=prot_Ecto-sp6_S_contig86.17711.1|Name=mRNA_Ecto-sp6_S_contig86.17711.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=589bp
MAPPKLAMRNQAVQAVGEKYFQVALVGLATAGVLAIVAVSIGSTRGMFEF
TIDRCDCLLTSGVEDAVAQGAECVPGQDYMGVDIGWKSFVIDKAYSTEGC
LDGWEGTKDIGSPFGDGIYKKKSAVYGNGATGAADASVGLFVVSAFIAII
MFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLG
DMESSLAATLFMATLDVCEDDWDTVGFPVGESEEIFCQGKPWNFEVPLYA
GWTAIAHVAVMLLTSVWILSKSGLVEGILDGSKLVGGKAVTPRVVEYEQA
VGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVS
PLRKMGGSPKHTKDNTLRTGESAGVRPKIALGGDIEGQATGGHNLSSPGP
VQSIPRATGAPGSKVDTKAAKKAAKKAAKKGALPGKPGGGGGRSASASEE
EEVSPAIRSSGPWDRDGEESGSYGDVETDSSVGSVARSPASVVSGKGHEK
TRSEIDWGRIMDAGDNDGTAKQYDDGDEDDDSPHLSSVMLGDLDMMFHGP
SVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV*