prot_Ecto-sp6_S_contig85.17699.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig85.17699.1
Unique Nameprot_Ecto-sp6_S_contig85.17699.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length541
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig85.17699.1 vs. uniprot
Match: D8LTU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU9_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 8.760e-142
Identity = 260/316 (82.28%), Postives = 274/316 (86.71%), Query Frame = 0 
Query:    9 RLVKDFVGARLEAEETLRKQRVAALLDRAVDSQEATWDASHRKSVPLDETVSGRQ---------NQRPDSSSGSGQHALRPGPAEGSSSARDARHHVVSSSVIPSPPAGDETPRSGAAARDLCKEGAPRSDGEQRLLGAAPVALTALRQRERALASPVAVLDDRMARARPTGLLATVRPASVSVSALVSHSTPVPAAGLTCFDRSSDENVVDDTAGRVVALGAELKGNAPAASSAAAVAATHGRYRYGQRRRRMSVPLLASLAGGDEDAGALDSGARAGEMRRPWTTSHGEGGAEVIMREEGDEERSGGGVTVRPF 315
            RLVKDFVGARLEAEETLRKQR AALLDR VDS E   DASHR S+ LDET+SGRQ         +QRPDSSSGS QH+LRPGPAE SS A DARHHVVSS+V PSP AGDETPRSGA+ARDLC EGA ++DGEQRLLGAAPVALTALRQRERALASPVAVLDDRMARARPTGLLATVRPASVSVS LVSHS PVPA GLTCFDRSSDE+VVDD AGRVVA GAEL+GNA  AS+ AAVAATHGRY YGQRRRRMSVPLLASLAGGDEDAGAL SGARA EMRRPWTT + EG AEVIMREE +E+ S GGVTVRPF
Sbjct: 3395 RLVKDFVGARLEAEETLRKQRAAALLDRVVDSPEVALDASHRNSLQLDETISGRQPQDQGLLEQHQRPDSSSGSEQHSLRPGPAEDSSPASDARHHVVSSAVTPSPSAGDETPRSGASARDLCNEGALQTDGEQRLLGAAPVALTALRQRERALASPVAVLDDRMARARPTGLLATVRPASVSVSTLVSHSAPVPAVGLTCFDRSSDEDVVDDAAGRVVAFGAELRGNAAVASNEAAVAATHGRYLYGQRRRRMSVPLLASLAGGDEDAGALGSGARAREMRRPWTTPNSEGEAEVIMREEREEDSSRGGVTVRPF 3710
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTU9_ECTSI8.760e-14282.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 503..525

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:650705..652865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17699.1mRNA_Ecto-sp6_S_contig85.17699.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig85 650705..658916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig85.17699.1 ID=prot_Ecto-sp6_S_contig85.17699.1|Name=mRNA_Ecto-sp6_S_contig85.17699.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=541bp
MLHERPRPRLVKDFVGARLEAEETLRKQRVAALLDRAVDSQEATWDASHR
KSVPLDETVSGRQNQRPDSSSGSGQHALRPGPAEGSSSARDARHHVVSSS
VIPSPPAGDETPRSGAAARDLCKEGAPRSDGEQRLLGAAPVALTALRQRE
RALASPVAVLDDRMARARPTGLLATVRPASVSVSALVSHSTPVPAAGLTC
FDRSSDENVVDDTAGRVVALGAELKGNAPAASSAAAVAATHGRYRYGQRR
RRMSVPLLASLAGGDEDAGALDSGARAGEMRRPWTTSHGEGGAEVIMREE
GDEERSGGGVTVRPFSPPVRYAVRRLDLTHCNELRLSDLRIQHAPLPEIT
SVTSEGAPEDVGHAGSSSAVGRAETSKTIQRRASTPYSKPAHTSSAPRDC
GAASHGRTRVQSAPTRHLDGATTGDEVDWWSKGCKPPIAGDVIRFGLEQA
IVPRVSSPSSTNLSPWPSASHVQLSLGTSTPTLQVSRTSALSSGLGAGSR
SGLEAVRAEREAVEAEARQAMARAEPNLFPEIIDDSPATGD
back to top