prot_Ecto-sp6_S_contig85.17669.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig85.17669.1
Unique Nameprot_Ecto-sp6_S_contig85.17669.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length69
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: D8LRT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRT4_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 3.180e-40
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA
Sbjct:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68          
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: A0A835YV57_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV57_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.340e-33
Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            MSDVNELLI PLQ+F KDS+ L+KKCTKPDRKEFM VAKATTVGFLVMGFIGFFVKL+HIPINNI+M 
Sbjct:    1 MSDVNELLIIPLQQFFKDSVQLVKKCTKPDRKEFMIVAKATTVGFLVMGFIGFFVKLIHIPINNIIMG 68          
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: W7U037_9STRA (Transport protein sec61 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U037_9STRA)

HSP 1 Score: 112 bits (279), Expect = 9.000e-31
Identity = 52/68 (76.47%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            MSDVN  +IQPL+KF+KDS HL+KKCTKPDRKEF ++A AT+VGFL+MGFIGFFVKL+HIPINNIL+ 
Sbjct:   24 MSDVNAHIIQPLKKFAKDSSHLVKKCTKPDRKEFARIAYATSVGFLIMGFIGFFVKLIHIPINNILLG 91          
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: K3X8N9_GLOUD (Uncharacterized protein n=6 Tax=Oomycota TaxID=4762 RepID=K3X8N9_GLOUD)

HSP 1 Score: 110 bits (275), Expect = 2.020e-30
Identity = 53/68 (77.94%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            MSDVN L+ QPLQ+F K+S+HLIKKCTKPDRKEF ++A AT+VGFL+MGFIGFFVKLVHIPINNIL+ 
Sbjct:    1 MSDVNTLVFQPLQQFFKNSVHLIKKCTKPDRKEFTRIAAATSVGFLMMGFIGFFVKLVHIPINNILVG 68          
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: B5YLP6_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLP6_THAPS)

HSP 1 Score: 108 bits (271), Expect = 8.240e-30
Identity = 50/64 (78.12%), Postives = 60/64 (93.75%), Query Frame = 0
Query:    5 NELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            NE+LIQPL++F+KDS+HL+KKCTKPDRKEF  +AKAT +GFL+MGFIGFFVKLVHIPINNIL+ 
Sbjct:    8 NEVLIQPLRQFAKDSIHLVKKCTKPDRKEFTAIAKATGIGFLIMGFIGFFVKLVHIPINNILVG 71          
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: W4FU52_9STRA (Protein transporter Sec61 subunit gamma n=8 Tax=Oomycota TaxID=4762 RepID=W4FU52_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.170e-29
Identity = 51/68 (75.00%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            MSDVN L+I+PL++F+K+S+HL+KKCTKPDRKEF ++A AT VGFL+MGFIGFFVKLVHIPINNIL+ 
Sbjct:    1 MSDVNALVIEPLKQFAKNSVHLVKKCTKPDRKEFARIAGATGVGFLLMGFIGFFVKLVHIPINNILVG 68          
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: A0A067CAZ0_SAPPC (Translocase SEC61 complex gamma subunit n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAZ0_SAPPC)

HSP 1 Score: 107 bits (268), Expect = 2.300e-29
Identity = 49/68 (72.06%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            MSDVN ++I+PL+ F+K+S+HL+KKCTKPDRKEF ++A AT++GFL+MGFIGFFVKLVHIPINNIL+ 
Sbjct:    1 MSDVNAIVIEPLKAFAKNSIHLVKKCTKPDRKEFTRIAGATSIGFLMMGFIGFFVKLVHIPINNILVG 68          
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: B7FQV9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQV9_PHATC)

HSP 1 Score: 107 bits (267), Expect = 3.450e-29
Identity = 49/63 (77.78%), Postives = 59/63 (93.65%), Query Frame = 0
Query:    6 ELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            E+LI+PLQ+F+KDSMHL+KKCTKPDRKEF  +A+AT VGFL+MGFIGFFVKL+HIPINNIL+ 
Sbjct:   10 EVLIEPLQQFAKDSMHLVKKCTKPDRKEFTAIARATGVGFLIMGFIGFFVKLIHIPINNILVG 72          
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: M4BH76_HYAAE (Uncharacterized protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=M4BH76_HYAAE)

HSP 1 Score: 107 bits (266), Expect = 4.650e-29
Identity = 51/68 (75.00%), Postives = 61/68 (89.71%), Query Frame = 0
Query:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            MSDVN L+ QPL++F K+S+HLIKKC KPDRKEF ++A AT+VGFL+MGFIGFFVKLVHIPINNIL+ 
Sbjct:    1 MSDVNTLVFQPLKEFFKNSLHLIKKCNKPDRKEFARIAGATSVGFLLMGFIGFFVKLVHIPINNILVG 68          
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Match: A0A1Z5K738_FISSO (Protein transport protein SEC61 subunit gamma and related proteins n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K738_FISSO)

HSP 1 Score: 105 bits (263), Expect = 1.370e-28
Identity = 45/63 (71.43%), Postives = 61/63 (96.83%), Query Frame = 0
Query:    6 ELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMA 68
            E+L++PL++F+KDS+HL++KCTKPDRKEF Q+A+AT++GFL+MGFIGFFVKL+HIPINNIL+ 
Sbjct:    9 EVLVEPLRQFAKDSLHLVQKCTKPDRKEFTQIARATSIGFLIMGFIGFFVKLIHIPINNILVG 71          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT4_ECTSI3.180e-40100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YV57_9STRA3.340e-3385.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U037_9STRA9.000e-3176.47Transport protein sec61 subunit gamma n=2 Tax=Mono... [more]
K3X8N9_GLOUD2.020e-3077.94Uncharacterized protein n=6 Tax=Oomycota TaxID=476... [more]
B5YLP6_THAPS8.240e-3078.13Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
W4FU52_9STRA1.170e-2975.00Protein transporter Sec61 subunit gamma n=8 Tax=Oo... [more]
A0A067CAZ0_SAPPC2.300e-2972.06Translocase SEC61 complex gamma subunit n=2 Tax=Sa... [more]
B7FQV9_PHATC3.450e-2977.78Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
M4BH76_HYAAE4.650e-2975.00Uncharacterized protein n=16 Tax=Peronosporaceae T... [more]
A0A1Z5K738_FISSO1.370e-2871.43Protein transport protein SEC61 subunit gamma and ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023391Protein translocase SecE domain superfamilyGENE3D1.20.5.820coord: 8..68
e-value: 3.3E-32
score: 111.9
IPR023391Protein translocase SecE domain superfamilySUPERFAMILY103456Preprotein translocase SecE subunitcoord: 9..66
IPR008158Protein translocase SEC61 complex, gamma subunitTIGRFAMTIGR00327TIGR00327coord: 9..66
e-value: 6.4E-18
score: 62.3
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 14..66
e-value: 4.7E-15
score: 55.3
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitHAMAPMF_00422SecEcoord: 10..65
score: 12.203
NoneNo IPR availablePANTHERPTHR12309SEC61 GAMMA SUBUNITcoord: 1..67
NoneNo IPR availablePANTHERPTHR12309:SF5PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMAcoord: 1..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..68
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:344755..347181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17669.1mRNA_Ecto-sp6_S_contig85.17669.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig85 344755..347181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig85.17669.1 ID=prot_Ecto-sp6_S_contig85.17669.1|Name=mRNA_Ecto-sp6_S_contig85.17669.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=69bp
MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGF
IGFFVKLVHIPINNILMA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023391Prot_translocase_SecE_dom_sf
IPR008158Translocase_Sec61-g
IPR001901Translocase_SecE/Sec61-g