prot_Ecto-sp6_S_contig83.17483.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig83.17483.1
Unique Nameprot_Ecto-sp6_S_contig83.17483.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length73
Homology
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BLAST of mRNA_Ecto-sp6_S_contig83.17483.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 3.080e-37
Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0 
Query:    1 MPLIWRSKGLSEHQVGILGAIRPVASFFVTPVMCAFADRHSIHQQVRARLAPSRPVPSAASSTRPLGMPSEGT 73
            MPLIWRSKGLSEHQVGILGAIRPVASFFVTPVMCAFADRHSIHQQ   RLAPSRPVP AASSTRPLGMPSEGT
Sbjct:    1 MPLIWRSKGLSEHQVGILGAIRPVASFFVTPVMCAFADRHSIHQQRWRRLAPSRPVPPAASSTRPLGMPSEGT 73
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BLAST of mRNA_Ecto-sp6_S_contig83.17483.1 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 7.170e-22
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 
Query:    1 MPLIWRSKGLSEHQVGILGAIRPVASFFVTPVMCAFADRHSIHQQV 46
            MPLIWRSKGLSEHQVGILGAIRPVASFFV PVMCAFADRHSIHQQV
Sbjct:   27 MPLIWRSKGLSEHQVGILGAIRPVASFFVNPVMCAFADRHSIHQQV 72
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BLAST of mRNA_Ecto-sp6_S_contig83.17483.1 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 5.010e-8
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:   12 EHQVGILGAIRPVASFFVTPVMCAFADRHSIHQQV 46
            E  VG+LGAI PVASFF TPV CAFADRH+I QQV
Sbjct:    7 ESIVGLLGAINPVASFFWTPVACAFADRHNIQQQV 41
[Close]
BLAST of mRNA_Ecto-sp6_S_contig83.17483.1 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 7.460e-6
Identity = 20/44 (45.45%), Postives = 31/44 (70.45%), Query Frame = 0 
Query:    1 MPLIWRSKGLSEHQVGILGAIRPVASFFVTPVMCAFADRHSIHQ 44
            +P+IWRSK LSE +VG+L A+RP+A     PV+C+   ++ + Q
Sbjct:   31 VPVIWRSKRLSETEVGLLAAVRPIALLLAGPVICSLIGKYGVQQ 74
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G3W1_ECTSI3.080e-3794.52MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K6H4_9PHAE7.170e-2297.83MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JEM5_9PHAE5.010e-877.14MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
D7G4M5_ECTSI7.460e-645.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..73
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:18222..19656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17483.1mRNA_Ecto-sp6_S_contig83.17483.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig83 18222..19656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig83.17483.1 ID=prot_Ecto-sp6_S_contig83.17483.1|Name=mRNA_Ecto-sp6_S_contig83.17483.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=73bp
MPLIWRSKGLSEHQVGILGAIRPVASFFVTPVMCAFADRHSIHQQVRARL
APSRPVPSAASSTRPLGMPSEGT
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