prot_Ecto-sp6_S_contig82.17467.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig82.17467.1
Unique Nameprot_Ecto-sp6_S_contig82.17467.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length48
Homology
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BLAST of mRNA_Ecto-sp6_S_contig82.17467.1 vs. uniprot
Match: D8LDZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ9_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 3.290e-7
Identity = 26/40 (65.00%), Postives = 27/40 (67.50%), Query Frame = 0 
Query:    1 MKEVRHRNLTPTGCQGETGACS---GVALGVNYVLSVTKK 37
            M E RH NL PTGCQG   A     G ALGVNY+LSVTKK
Sbjct:    1 MNEARHPNLAPTGCQGVALARQRPEGAALGVNYLLSVTKK 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDZ9_ECTSI3.290e-765.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:659605..660124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17467.1mRNA_Ecto-sp6_S_contig82.17467.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig82 659605..660137 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17467.1 ID=prot_Ecto-sp6_S_contig82.17467.1|Name=mRNA_Ecto-sp6_S_contig82.17467.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=48bp
MKEVRHRNLTPTGCQGETGACSGVALGVNYVLSVTKKSSWATSSRKS*
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