prot_Ecto-sp6_S_contig82.17452.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig82.17452.1
Unique Nameprot_Ecto-sp6_S_contig82.17452.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length364
Homology
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BLAST of mRNA_Ecto-sp6_S_contig82.17452.1 vs. uniprot
Match: A0A6H5KZY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY4_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.810e-42
Identity = 209/289 (72.32%), Postives = 215/289 (74.39%), Query Frame = 0 
Query:   33 RAENTSDRLSLLAHKEQSGNDAARTGTAATADAGAARANGTQGAAXXXXXXXXX--SESAGPQHQAARLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVAQPTQQQPAPSAEQVALAEEAAPPSAEASPFAPHDSSDDAEVEQTNEEQQSEIKRRLVLVQAEISRLDKEEAESGRASPAATDSVVATSAAGVEHPPATLXXXXXXXXXXXXXXXXXXXXXSWEPPLFPSSGNGXXXXXXXXXXRHGQXXEKDEGRKEGL 319
            RAENTSDRLSLLAHKEQSGN+AA TG                   XXXXXXXX   SES GPQHQAARLS      XXXXXXX   X      XXXXXXXXXXXXXXXXXXXXXXXXXXXX     TVV QP QQQPAPSA+QVA AEEAAPP+AEASPFAPHDSSD AE+EQTNEEQQSEIKRRLVLVQAEISRLDKEEAESGRASPAA D VV       EHPPATL XXXXXXXXXXXXXXXXXXXX             XXXXXXXXXX HGQ  E+DEG+KEGL
Sbjct:  578 RAENTSDRLSLLAHKEQSGNEAAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXIGDSESGGPQHQAARLSPSAQLSXXXXXXXVSGXSWSIGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGKATVVMQPAQQQPAPSAQQVASAEEAAPPTAEASPFAPHDSSDAAEMEQTNEEQQSEIKRRLVLVQAEISRLDKEEAESGRASPAAADGVV-------EHPPATLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGQQEERDEGQKEGL 859
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BLAST of mRNA_Ecto-sp6_S_contig82.17452.1 vs. uniprot
Match: D7FYI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI9_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.440e-5
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 
Query:    1 AAVAESERQLLSIIAQREAKAAYWEKASRDP 31
            AAVAESERQLLSIIAQREAKAAYWEKASRDP
Sbjct:  378 AAVAESERQLLSIIAQREAKAAYWEKASRDP 408
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZY4_9PHAE1.810e-4272.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYI9_ECTSI1.440e-5100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:554571..556619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17452.1mRNA_Ecto-sp6_S_contig82.17452.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig82 554571..556619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17452.1 ID=prot_Ecto-sp6_S_contig82.17452.1|Name=mRNA_Ecto-sp6_S_contig82.17452.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=364bp
AAVAESERQLLSIIAQREAKAAYWEKASRDPPRAENTSDRLSLLAHKEQS
GNDAARTGTAATADAGAARANGTQGAAAAAAAATGASESAGPQHQAARLS
PSAQLSQAAQVATVSGLSWSIGAMQAARVVQARAAGQAASEARAAAAVQA
TPGGKATVVAQPTQQQPAPSAEQVALAEEAAPPSAEASPFAPHDSSDDAE
VEQTNEEQQSEIKRRLVLVQAEISRLDKEEAESGRASPAATDSVVATSAA
GVEHPPATLESSSSPAATAAATTTAAVMAPSWEPPLFPSSGNGVAGGVQQ
QQRRHGQQEEKDEGRKEGLDEGAPAGRKVRGRARSRVAVAAAGARRLAPC
GKLEALWTNHPSE*
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