prot_Ecto-sp6_S_contig82.17422.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig82.17422.1
Unique Nameprot_Ecto-sp6_S_contig82.17422.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length292
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A6H5L3N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3N7_9PHAE)

HSP 1 Score: 491 bits (1263), Expect = 2.110e-173
Identity = 254/307 (82.74%), Postives = 263/307 (85.67%), Query Frame = 0
Query:    1 MPFRQGMVDFRMLVPLGLAALVLSTPSEAFFSSAGRLGASSQRHLLLPSCAGRHGGVALDKVAKMANVT---------------ALPNALQTRGGT-TIXXXXXXXXXXXXXXXXXRRLSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR 291
            MP R+GMVDF+MLVPLGL ALVLST SEAFF+SAGRL ASSQRHLLLPSCAGRH G ALD VAKMANVT               ALPNALQTRGGT +                  RRLSVVWGRYL ALNDQPLLTKALSSGVVSGTANIIEQTLSAAKF+W GWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQV++DTIIGATLLNCGYFAVHEIFS+ITTGRLFPLP LGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPP+LRVLVSNFVAVFWGYLLSKWCR
Sbjct:   15 MPSRRGMVDFKMLVPLGLTALVLSTASEAFFTSAGRLRASSQRHLLLPSCAGRHRGAALDTVAKMANVTVGDCVDPMLPCASRVALPNALQTRGGTISSSSSNSSVVAEDKGRSARRRLSVVWGRYLGALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFNWEGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVLVDTIIGATLLNCGYFAVHEIFSSITTGRLFPLPGLGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPDLRVLVSNFVAVFWGYLLSKWCR 321          
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: D7FZH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH5_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 1.090e-133
Identity = 214/254 (84.25%), Postives = 219/254 (86.22%), Query Frame = 0
Query:   62 VAKMANVTALPNALQTRGGTTIXXXXXXXXXXXXXXXXXRRLSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRL------------------------GNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR 291
            VA  A+ TALP ALQTRGGT I XXXXXXXXXXXXXXX RR SVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDR                         GNAK VTSRVPGKWGRVSFQ ++DTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIV+KIASRYSVMMVANCRVWPPVVFLNFAFVPP+LRVLVSNFVAVFWGYLLSKWCR
Sbjct:   18 VAVRASRTALPKALQTRGGTIISXXXXXXXXXXXXXXXRRRFSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRALACCTRWPSLPLLLRGVKSHGQVEGNAKGVTSRVPGKWGRVSFQGMVDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVKKIASRYSVMMVANCRVWPPVVFLNFAFVPPDLRVLVSNFVAVFWGYLLSKWCR 271          
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: D7FZH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH3_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 9.310e-86
Identity = 147/288 (51.04%), Postives = 181/288 (62.85%), Query Frame = 0
Query:    7 MVDFRMLVPLGLAALVLSTPS-EAFFSSAG--RLGASSQRHLLLPSCAGRHGGVALDKVAKMANVTALPNALQTRGGTTIXXXXXXXXXXXXXXXXXRRLSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR 291
            M   RM + + L+AL  ST + +A  SSAG  R      RH L    +G H   AL KV     +T    AL                         R +S +WGRYL+AL ++PLLTK+LSSGV+SGTAN+IEQTLS A F    W  F+L G VF G  LH+WY  L+R+GN++ +TSR+  KWGRV  QV+LD  IGA+L+N GYFA H +  A  TGR FPLPELG  IVEK+ SRY VMM+ N R+WP V F+NFAF+P +LRVLVSNFVAV WGYL+SKWCR
Sbjct:    4 MSALRMCLLVALSALAFSTTTGDALVSSAGAGRWSGGHCRHHLQSRSSGWHRAAALGKVE--TTMTNAAEALPADASRFQAGGASGGGVEDAGKIKGRGVSRMWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWSAFTLVGAVFIGTVLHHWYGFLERMGNSEVITSRIKSKWGRVVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 289          
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A835YMP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP8_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.800e-37
Identity = 72/188 (38.30%), Postives = 105/188 (55.85%), Query Frame = 0
Query:  106 VWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAK------FDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLS 287
            +W +YL  L+ +PL+TKA +S ++    + I Q L A        FD     ++    +      +HYWYN LD+     A  + V GKW RV  Q+ +D  +G T+LN G++ VH I SA+  GR+FPL  L   I  K++     M++ N ++WP   F+NF+ VPP LRVL +NFVA+FW   LS
Sbjct:   75 LWNKYLGQLDRRPLITKAWTSTIIGCIGDTIAQVLEARTKGIPFVFDTQRTAIYIFCAVAIGSTAVHYWYNFLDQ---KVANPNTVKGKWNRVFRQLAVDQTVGCTVLNAGFYIVHTIVSAVVMGRVFPLGALADTITGKLSREMWPMLINNWKLWPAANFINFSLVPPQLRVLFANFVAIFWNIYLS 259          
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: PX24B_DICDI (PXMP2/4 family protein 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=PX24B_DICDI)

HSP 1 Score: 97.8 bits (242), Expect = 5.020e-21
Identity = 59/192 (30.73%), Postives = 93/192 (48.44%), Query Frame = 0
Query:  106 VWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTL--------SAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRL--GNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLS 287
            +WG YL  L++ PL+TK+LS+G + GT +I+ Q L        S  K D+      S  GI + G  LHYWY  LD +  G  ++V  +          ++++D ++ A +   G+  V    +    G L        + +E         +  N  +WP    +NF+ VPPNLRVL S+ +++FWG  LS
Sbjct:    4 LWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEHKFKDEKSQFKLDYKRVATMSTVGIFYSGPMLHYWYRSLDIMVKGEGRSVIIK----------KMLIDQLLFAPVAIGGFMTVTNFIN--NKGEL--------KNLENFTKELFYAVKINWLIWPAAQIINFSLVPPNLRVLYSSIISIFWGMFLS 175          
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A2J8A157_9CHLO (PXMP2/4 family protein 2 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A157_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 1.570e-17
Identity = 58/183 (31.69%), Postives = 84/183 (45.90%), Query Frame = 0
Query:  106 VWGRYLNALNDQPLLTKALSSGVVSGTANIIEQT-LSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLS 287
            +W  Y+  L   PLLTKA++ G+++   +I  Q  +     DW     F+  G+   G  LHYWY +L+RL  A+             + Q++LD          G FA   +F A     LF +   G  I  K+       +  N  +W P  F NF FVPPNL+VL +N VA+ W   +S
Sbjct:   86 LWAWYMACLESSPLLTKAVTCGLLNALGDIFCQLFIDGGALDWKRTATFTFMGVALVGPTLHYWYALLNRLVPARGAAG--------ATLQLLLDQ---------GGFA--PVFLATFISVLFLIEGKGSMIRAKLEQDLVETIKVNWILWIPAQFFNFRFVPPNLQVLTANVVALAWNTYMS 249          
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A7M3QA12_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QA12_SPIER)

HSP 1 Score: 91.7 bits (226), Expect = 2.730e-17
Identity = 60/187 (32.09%), Postives = 90/187 (48.13%), Query Frame = 0
Query:  107 WGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGG--WVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR 291
            W  YL+ L+  PL T+ +S+ ++  T +II Q +   + ++     + F + G+ F G   H WYN +DRL     +   V          V  D +I A  +      V  I   +   + + + E        +++ Y   M+ N RVWPPV F+NF FVP +LRVLV NFVA+FW   LS   R
Sbjct:   50 WSGYLHLLSKYPLRTQCVSTALIMSTGDIIAQKIVERQPNYSPSRTLKFGMIGMCFVGPTFHCWYNFIDRLYTGTKLIRTVK--------MVASDQLIMAPCM------VFSIIGLVGLTKNWSIEEAK----TGLSNNYIQAMLMNIRVWPPVQFINFTFVPLHLRVLVVNFVALFWNTYLSYKAR 218          
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A0X3PLH9_SCHSO (Protein Mpv17 n=4 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0X3PLH9_SCHSO)

HSP 1 Score: 87.4 bits (215), Expect = 3.110e-17
Identity = 57/187 (30.48%), Postives = 85/187 (45.45%), Query Frame = 0
Query:  107 WGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAK--FDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR 291
            W  YL  L   PL T+ +S+ ++  + +II Q +   +  +     + F + G+ F G   HYWYN +DR+     V   +          V  D  + A    C  F++  +   +T        + GL+        Y   M  N R+WPP+ F+NF  VP +LRVLV NFVA+FW   LS   R
Sbjct:   10 WSGYLRLLKKYPLQTQCISTAIIMSSGDIIAQKIVERQPTYSPSRTLKFGMIGMCFVGPTFHYWYNFIDRIYTGTKVVRSLK--------MVASDQFLMAP---CMVFSIIGLVG-LTKNWSIDEAKTGLK------DNYIRAMFMNIRIWPPIQFINFTVVPVHLRVLVVNFVALFWNTYLSYKAR 178          
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A1Y1IBF0_KLENI (Mpv17 / PMP22 family domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBF0_KLENI)

HSP 1 Score: 87.4 bits (215), Expect = 3.250e-17
Identity = 54/182 (29.67%), Postives = 95/182 (52.20%), Query Frame = 0
Query:  103 LSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAK-FDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVE-KIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFW 282
            L V W RYL++L  +PL+TKA++SG ++  A+++ Q +  AK        + ++ G+ F G   H+++ I+DR+  AK   S V  K       V+++ +    + N           AI T R + +  L     + K+   Y  +     ++WP V F+N++F+PP LRVL +N +++FW
Sbjct:    5 LVVAWQRYLHSLGKRPLITKAITSGTLAAVADVLAQKMGGAKHLQPKKSALMAVYGLCFGGPTYHFFHKIMDRVFGAKTDPSTVIQK-------VVVEQLTFGVMYNL----------AILTYRAYVVEGLTWAATKAKVRRDYWGVQKQGWKLWPLVAFINYSFLPPQLRVLFANVLSIFW 169          
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A8J4UQV3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UQV3_9MYCE)

HSP 1 Score: 87.4 bits (215), Expect = 3.810e-17
Identity = 59/206 (28.64%), Postives = 96/206 (46.60%), Query Frame = 0
Query:  103 LSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTL-------------------SAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRL--GNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLS 287
            +S  W  YL+ L+  PL TK+LS+GV+ GT +I+ Q +                   +  K D+   +  +  G++F G  LHYWY  LD++  G+ K V  +          +++LD  + A ++   +  +         G+     E      +KI +     M AN  +WP    +NF+ VPPNLRVL ++ V++FW   LS
Sbjct:    1 MSRYWRGYLHLLDKYPLTTKSLSTGVLMGTGDILAQRIDFHFKQQSLNKDNNNTNDDNRFKIDYQRVLTMTSVGVLFSGPVLHYWYTSLDKIVVGSGKTVYIK----------KMLLDQGVFAPIVISCFMGIMNTIH----GKSLADTE------QKIKNDLFYAMKANWMLWPAAQLINFSLVPPNLRVLYTSVVSIFWNIFLS 186          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3N7_9PHAE2.110e-17382.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZH5_ECTSI1.090e-13384.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZH3_ECTSI9.310e-8651.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMP8_9STRA2.800e-3738.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
PX24B_DICDI5.020e-2130.73PXMP2/4 family protein 2 n=1 Tax=Dictyostelium dis... [more]
A0A2J8A157_9CHLO1.570e-1731.69PXMP2/4 family protein 2 n=1 Tax=Tetrabaena social... [more]
A0A7M3QA12_SPIER2.730e-1732.09Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A0X3PLH9_SCHSO3.110e-1730.48Protein Mpv17 n=4 Tax=Schistocephalus solidus TaxI... [more]
A0A1Y1IBF0_KLENI3.250e-1729.67Mpv17 / PMP22 family domain containing protein n=1... [more]
A0A8J4UQV3_9MYCE3.810e-1728.64Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 236..287
e-value: 2.7E-15
score: 56.3
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 67..287
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 288..291
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 244..264
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..287
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 265..269
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..146
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.638
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 192..214
NoneNo IPR availableTMHMMTMhelixcoord: 264..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:310785..316945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17422.1mRNA_Ecto-sp6_S_contig82.17422.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig82 310785..318101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17422.1 ID=prot_Ecto-sp6_S_contig82.17422.1|Name=mRNA_Ecto-sp6_S_contig82.17422.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=292bp
MPFRQGMVDFRMLVPLGLAALVLSTPSEAFFSSAGRLGASSQRHLLLPSC
AGRHGGVALDKVAKMANVTALPNALQTRGGTTISSSSSSVVAEDNRRSTR
RRLSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGW
VVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDT
IIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVA
NCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22