mRNA_Ecto-sp6_S_contig82.17422.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig82.17422.1
Unique NamemRNA_Ecto-sp6_S_contig82.17422.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A6H5L3N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3N7_9PHAE)

HSP 1 Score: 490 bits (1262), Expect = 3.410e-167
Identity = 254/307 (82.74%), Postives = 263/307 (85.67%), Query Frame = 1 
Query:    1 MPFRQGMVDFRMLVPLGLAALVLSTPSEAFFSSAGRLGASSQRHLLLPSCAGRHGGVALDKVAKMANVT---------------ALPNALQTRGGT-TIXXXXXXXXXXXXXXXXXRRLSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR 873
            MP R+GMVDF+MLVPLGL ALVLST SEAFF+SAGRL ASSQRHLLLPSCAGRH G ALD VAKMANVT               ALPNALQTRGGT +                  RRLSVVWGRYL ALNDQPLLTKALSSGVVSGTANIIEQTLSAAKF+W GWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQV++DTIIGATLLNCGYFAVHEIFS+ITTGRLFPLP LGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPP+LRVLVSNFVAVFWGYLLSKWCR
Sbjct:   15 MPSRRGMVDFKMLVPLGLTALVLSTASEAFFTSAGRLRASSQRHLLLPSCAGRHRGAALDTVAKMANVTVGDCVDPMLPCASRVALPNALQTRGGTISSSSSNSSVVAEDKGRSARRRLSVVWGRYLGALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFNWEGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVLVDTIIGATLLNCGYFAVHEIFSSITTGRLFPLPGLGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPDLRVLVSNFVAVFWGYLLSKWCR 321
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: D7FZH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH5_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 7.410e-128
Identity = 214/254 (84.25%), Postives = 219/254 (86.22%), Query Frame = 1 
Query:  184 VAKMANVTALPNALQTRGGTTIXXXXXXXXXXXXXXXXXRRLSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRL------------------------GNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR 873
            VA  A+ TALP ALQTRGGT I XXXXXXXXXXXXXXX RR SVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDR                         GNAK VTSRVPGKWGRVSFQ ++DTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIV+KIASRYSVMMVANCRVWPPVVFLNFAFVPP+LRVLVSNFVAVFWGYLLSKWCR
Sbjct:   18 VAVRASRTALPKALQTRGGTIISXXXXXXXXXXXXXXXRRRFSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRALACCTRWPSLPLLLRGVKSHGQVEGNAKGVTSRVPGKWGRVSFQGMVDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVKKIASRYSVMMVANCRVWPPVVFLNFAFVPPDLRVLVSNFVAVFWGYLLSKWCR 271
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: D7FZH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH3_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 9.690e-81
Identity = 147/288 (51.04%), Postives = 181/288 (62.85%), Query Frame = 1 
Query:   19 MVDFRMLVPLGLAALVLSTPS-EAFFSSAG--RLGASSQRHLLLPSCAGRHGGVALDKVAKMANVTALPNALQTRGGTTIXXXXXXXXXXXXXXXXXRRLSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR 873
            M   RM + + L+AL  ST + +A  SSAG  R      RH L    +G H   AL KV     +T    AL                         R +S +WGRYL+AL ++PLLTK+LSSGV+SGTAN+IEQTLS A F    W  F+L G VF G  LH+WY  L+R+GN++ +TSR+  KWGRV  QV+LD  IGA+L+N GYFA H +  A  TGR FPLPELG  IVEK+ SRY VMM+ N R+WP V F+NFAF+P +LRVLVSNFVAV WGYL+SKWCR
Sbjct:    4 MSALRMCLLVALSALAFSTTTGDALVSSAGAGRWSGGHCRHHLQSRSSGWHRAAALGKVE--TTMTNAAEALPADASRFQAGGASGGGVEDAGKIKGRGVSRMWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWSAFTLVGAVFIGTVLHHWYGFLERMGNSEVITSRIKSKWGRVVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 289
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A835YMP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP8_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.460e-34
Identity = 72/188 (38.30%), Postives = 105/188 (55.85%), Query Frame = 1 
Query:  316 VWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAK------FDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLS 861
            +W +YL  L+ +PL+TKA +S ++    + I Q L A        FD     ++    +      +HYWYN LD+     A  + V GKW RV  Q+ +D  +G T+LN G++ VH I SA+  GR+FPL  L   I  K++     M++ N ++WP   F+NF+ VPP LRVL +NFVA+FW   LS
Sbjct:   75 LWNKYLGQLDRRPLITKAWTSTIIGCIGDTIAQVLEARTKGIPFVFDTQRTAIYIFCAVAIGSTAVHYWYNFLDQ---KVANPNTVKGKWNRVFRQLAVDQTVGCTVLNAGFYIVHTIVSAVVMGRVFPLGALADTITGKLSREMWPMLINNWKLWPAANFINFSLVPPQLRVLFANFVAIFWNIYLS 259
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: PX24B_DICDI (PXMP2/4 family protein 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=PX24B_DICDI)

HSP 1 Score: 97.8 bits (242), Expect = 1.080e-19
Identity = 59/192 (30.73%), Postives = 93/192 (48.44%), Query Frame = 1 
Query:  316 VWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTL--------SAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRL--GNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLS 861
            +WG YL  L++ PL+TK+LS+G + GT +I+ Q L        S  K D+      S  GI + G  LHYWY  LD +  G  ++V  +          ++++D ++ A +   G+  V    +    G L        + +E         +  N  +WP    +NF+ VPPNLRVL S+ +++FWG  LS
Sbjct:    4 LWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEHKFKDEKSQFKLDYKRVATMSTVGIFYSGPMLHYWYRSLDIMVKGEGRSVIIK----------KMLIDQLLFAPVAIGGFMTVTNFIN--NKGEL--------KNLENFTKELFYAVKINWLIWPAAQIINFSLVPPNLRVLYSSIISIFWGMFLS 175
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A2J8A157_9CHLO (PXMP2/4 family protein 2 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A157_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 2.270e-16
Identity = 58/183 (31.69%), Postives = 84/183 (45.90%), Query Frame = 1 
Query:  316 VWGRYLNALNDQPLLTKALSSGVVSGTANIIEQT-LSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLS 861
            +W  Y+  L   PLLTKA++ G+++   +I  Q  +     DW     F+  G+   G  LHYWY +L+RL  A+             + Q++LD          G FA   +F A     LF +   G  I  K+       +  N  +W P  F NF FVPPNL+VL +N VA+ W   +S
Sbjct:   86 LWAWYMACLESSPLLTKAVTCGLLNALGDIFCQLFIDGGALDWKRTATFTFMGVALVGPTLHYWYALLNRLVPARGAAG--------ATLQLLLDQ---------GGFA--PVFLATFISVLFLIEGKGSMIRAKLEQDLVETIKVNWILWIPAQFFNFRFVPPNLQVLTANVVALAWNTYMS 249
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A1Y1IBF0_KLENI (Mpv17 / PMP22 family domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBF0_KLENI)

HSP 1 Score: 87.8 bits (216), Expect = 2.660e-16
Identity = 54/182 (29.67%), Postives = 95/182 (52.20%), Query Frame = 1 
Query:  307 LSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAK-FDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVE-KIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFW 846
            L V W RYL++L  +PL+TKA++SG ++  A+++ Q +  AK        + ++ G+ F G   H+++ I+DR+  AK   S V  K       V+++ +    + N           AI T R + +  L     + K+   Y  +     ++WP V F+N++F+PP LRVL +N +++FW
Sbjct:    5 LVVAWQRYLHSLGKRPLITKAITSGTLAAVADVLAQKMGGAKHLQPKKSALMAVYGLCFGGPTYHFFHKIMDRVFGAKTDPSTVIQK-------VVVEQLTFGVMYNL----------AILTYRAYVVEGLTWAATKAKVRRDYWGVQKQGWKLWPLVAFINYSFLPPQLRVLFANVLSIFW 169
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A8J4UQV3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UQV3_9MYCE)

HSP 1 Score: 87.4 bits (215), Expect = 4.280e-16
Identity = 59/206 (28.64%), Postives = 96/206 (46.60%), Query Frame = 1 
Query:  307 LSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTL-------------------SAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRL--GNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLS 861
            +S  W  YL+ L+  PL TK+LS+GV+ GT +I+ Q +                   +  K D+   +  +  G++F G  LHYWY  LD++  G+ K V  +          +++LD  + A ++   +  +         G+     E      +KI +     M AN  +WP    +NF+ VPPNLRVL ++ V++FW   LS
Sbjct:    1 MSRYWRGYLHLLDKYPLTTKSLSTGVLMGTGDILAQRIDFHFKQQSLNKDNNNTNDDNRFKIDYQRVLTMTSVGVLFSGPVLHYWYTSLDKIVVGSGKTVYIK----------KMLLDQGVFAPIVISCFMGIMNTIH----GKSLADTE------QKIKNDLFYAMKANWMLWPAAQLINFSLVPPNLRVLYTSVVSIFWNIFLS 186
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A7M3QA12_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QA12_SPIER)

HSP 1 Score: 92.0 bits (227), Expect = 4.310e-16
Identity = 61/191 (31.94%), Postives = 92/191 (48.17%), Query Frame = 1 
Query:  319 WGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGG--WVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR*RVS 885
            W  YL+ L+  PL T+ +S+ ++  T +II Q +   + ++     + F + G+ F G   H WYN +DRL     +   V          V  D +I A  +      V  I   +   + + + E        +++ Y   M+ N RVWPPV F+NF FVP +LRVLV NFVA+FW   LS   R + S
Sbjct:   50 WSGYLHLLSKYPLRTQCVSTALIMSTGDIIAQKIVERQPNYSPSRTLKFGMIGMCFVGPTFHCWYNFIDRLYTGTKLIRTVK--------MVASDQLIMAPCM------VFSIIGLVGLTKNWSIEEAK----TGLSNNYIQAMLMNIRVWPPVQFINFTFVPLHLRVLVVNFVALFWNTYLSYKARCKAS 222
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BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Match: A0A0X3PLH9_SCHSO (Protein Mpv17 n=4 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0X3PLH9_SCHSO)

HSP 1 Score: 87.0 bits (214), Expect = 4.700e-16
Identity = 56/183 (30.60%), Postives = 84/183 (45.90%), Query Frame = 1 
Query:  319 WGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAK--FDWGGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLS 861
            W  YL  L   PL T+ +S+ ++  + +II Q +   +  +     + F + G+ F G   HYWYN +DR+     V   +          V  D  + A    C  F++  +   +T        + GL+        Y   M  N R+WPP+ F+NF  VP +LRVLV NFVA+FW   LS
Sbjct:   10 WSGYLRLLKKYPLQTQCISTAIIMSSGDIIAQKIVERQPTYSPSRTLKFGMIGMCFVGPTFHYWYNFIDRIYTGTKVVRSLK--------MVASDQFLMAP---CMVFSIIGLVG-LTKNWSIDEAKTGLK------DNYIRAMFMNIRIWPPIQFINFTVVPVHLRVLVVNFVALFWNTYLS 174
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3N7_9PHAE3.410e-16782.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZH5_ECTSI7.410e-12884.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZH3_ECTSI9.690e-8151.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMP8_9STRA1.460e-3438.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
PX24B_DICDI1.080e-1930.73PXMP2/4 family protein 2 n=1 Tax=Dictyostelium dis... [more]
A0A2J8A157_9CHLO2.270e-1631.69PXMP2/4 family protein 2 n=1 Tax=Tetrabaena social... [more]
A0A1Y1IBF0_KLENI2.660e-1629.67Mpv17 / PMP22 family domain containing protein n=1... [more]
A0A8J4UQV3_9MYCE4.280e-1628.64Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A7M3QA12_SPIER4.310e-1631.94Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A0X3PLH9_SCHSO4.700e-1630.60Protein Mpv17 n=4 Tax=Schistocephalus solidus TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:310785..318101 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score268.9
Seed ortholog evalue2.9e-69
Seed eggNOG ortholog2880.D7FZH3
Model size2032
KEGG koko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categorychloroplast
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons6
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-23_002830.1
Cds size876
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17422.1prot_Ecto-sp6_S_contig82.17422.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig82 310785..316945 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350455.5786238-CDS-Ecto-sp6_S_contig82:310784..3109391682350455.5786238-CDS-Ecto-sp6_S_contig82:310784..310939Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 310785..310939 +
1682350455.5916312-CDS-Ecto-sp6_S_contig82:311308..3113611682350455.5916312-CDS-Ecto-sp6_S_contig82:311308..311361Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 311309..311361 +
1682350455.604965-CDS-Ecto-sp6_S_contig82:314281..3145081682350455.604965-CDS-Ecto-sp6_S_contig82:314281..314508Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 314282..314508 +
1682350455.61551-CDS-Ecto-sp6_S_contig82:314958..3150441682350455.61551-CDS-Ecto-sp6_S_contig82:314958..315044Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 314959..315044 +
1682350455.6260324-CDS-Ecto-sp6_S_contig82:315471..3156671682350455.6260324-CDS-Ecto-sp6_S_contig82:315471..315667Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 315472..315667 +
1682350455.6358058-CDS-Ecto-sp6_S_contig82:316786..3169451682350455.6358058-CDS-Ecto-sp6_S_contig82:316786..316945Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 316787..316945 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350455.6460736-UTR-Ecto-sp6_S_contig82:316945..3181011682350455.6460736-UTR-Ecto-sp6_S_contig82:316945..318101Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig82 316946..318101 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig82.17422.1

>prot_Ecto-sp6_S_contig82.17422.1 ID=prot_Ecto-sp6_S_contig82.17422.1|Name=mRNA_Ecto-sp6_S_contig82.17422.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=292bp
MPFRQGMVDFRMLVPLGLAALVLSTPSEAFFSSAGRLGASSQRHLLLPSC
AGRHGGVALDKVAKMANVTALPNALQTRGGTTISSSSSSVVAEDNRRSTR
RRLSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGW
VVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVILDT
IIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVEKIASRYSVMMVA
NCRVWPPVVFLNFAFVPPNLRVLVSNFVAVFWGYLLSKWCR*
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mRNA from alignment at Ecto-sp6_S_contig82:310785..318101+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig82.17422.1 ID=mRNA_Ecto-sp6_S_contig82.17422.1|Name=mRNA_Ecto-sp6_S_contig82.17422.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7317bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:310785..318101+ (Ectocarpus species6 EcLAC_371)
ATGCCCTTCCGACAGGGGATGGTAGACTTCAGGATGCTTGTCCCTCTGGG
GTTGGCAGCGCTCGTCCTCTCGACTCCGAGCGAAGCATTCTTCTCCTCGG
CAGGACGCCTGGGCGCGTCGTCTCAACGCCACCTGCTATTGCCGTCTTGC
GCAGGGTGAGAGAGCGGACACGTCGATTTCCTCTCGGCGGCCGACCATCA
ATCAACAGCACCTGATCTCCAGCATGGTTCCAGTGGATAGTACAGGCCAT
CTATCTAGCAAGCGGCGTGGTGTGATTGAATTGTAGGATTGTATGCCTGT
AGCATGCGGATGGGTTTGAGTTGCAGAGCGTTGCTTGATTACACCGAGGT
GGGTGTGTTGACGAACATTCATGTTGTCGCGTCACATGCGTACATCCCGT
TATCTTGTGTTTTTCAAAACTGCTGTCCACGTCGATCGATCAATCTGTTC
TCATTTCTTTCCCTTCCACTTTGCCATATGCCCCTCCTCTTCCTCTCCGC
ACACCGCGCTTGTCTTTTCAACAGACGGCATGGGGGAGTGGCCCTCGACA
AAGTAGCCAAGATGGCAAACGTAACAGGTGTGACCTCGCTCTATCCCTCC
CCAAATGTTTATTTACATGCATGTCGGAATCGGGGCTACTGCACCTGTTG
CTGTAACTTGATGTTTGTCTGGGGTTGTGTCCCAACGTCCACATCTCCGT
AtataacttgtacACTACATTACAGCTGTACAGCAGCTCGTCCTGCCTGC
TGCAGATGCCAGTCTGCAGTCTGCCGAGTGTCCATGTCTCGAATACGTAG
ACGATGTGCTCTGTATTGCACCTTTTGGCATACTACTGCAGGTATTTGGG
GGTCGAAGTCCATCACAAGCTAGAGTGAGGGTAGGGCACCACAGCAGTTC
CTGTTCTCTCGATCCATGCCCtaaaTACAGCCCAACTTTGCGATGGGTTC
AAACACCGTGTCAGATCGTGGTCATCATCTGTCAGGTGGTTGTCCCCGGT
GtTTAACTTGGCTCATCCACACAtTTTAGTAAGTTTAAGCGAGGCTGCgt
tGTTAATGCTActcCTCTGCAACTGCTTACTACTTTCGTTTTTATTGTGT
TTGTTGTTCTCTCAGTTACCTACTCGCTCTCTcTAGCTGTTTGCTTctgg
CCGAAGAGCCTACGGTAGATGAATTTCAGCAGCGTGAACGGCTTGCTTGC
GTGAGCCGTTATTgtgGTAGTTTTTTgTTGTTGAAGATATACGCACAATC
AACAGTAGGACTCGCCGTTGGTGACAATACCGCACTCCGTCGTTTGTTGA
AAATGCAGTACGATGTAGTAATCGGGTGCCTATCATGCGGGTGCTGCTGT
ACATCAGAACGAATCGTAGAAGGATGTGCCACGCGCTTTCACCCGGACGC
CCGCACCAGTTCTCGACACCATCTTGATGCTTCCATCTGTGGCATTCAAT
TTCACCCGCACTACGTGTATAACCCGCCCCATAGAGGGCACCCGACAGCT
TTATCCGTATCCGTATCTTCACCGGGGGGGGGGGCTTGCAACGATTTCAA
CGACAGCCGCCCCCCCCGTCTCTTTGAGCGCTCCCCTTGTCGGTGGTCCG
TCCGTTGTTGTTGTCTATTAGCGCCGCGTGTTGACGAAAATGGCGGCGAA
GTAGCTGACGAAGGTTGACAGGGTGGACGCAACCACCGGGGTGGCGTCAA
TTCATTCAACAGCATGCTTTTTTTTTACGAAAGTGACACAGCGACAGGAA
ATGACGAGAAGAGATAGGTGCCATCCGACTTACCAACCCGCGAGTTTCGT
TATATCGCATTTGACTTCAAAAGAGAAGCAGTGCGCGTATATCAATGTCC
TTCTACGGACGGTGCCGGGGTCGCATCGCTCTGTCTGTTTGTGTATGCGG
AACGGCCTCAATTCACGTGCGAAGGAATGCACCGCAGAATATTCCTTCGT
GGTCCCGGATCAGAGGCCCCTGATTCAGAGCGGCAACACAGCAGTGGGAC
GGGCAGAAACTGCAAGCAATGGACAAATACAGCCCTAAATCCCTGGTGGA
GGGGGAGACGCTGTTGAGGGAGGGGGGCGCCGGGCACGTAATTGAGGACC
ATAAGACATCGTTTTCAGTCGATGATGCCATGACAAAGGCAAAAAAAAAA
TTGGGGGGGGGGCGAATATGTTCATGAATGTGCCCGGGTAAGTTATGCCA
CCGCGAAAATTGAGCGATTCCAAGACCAAAGACGTAGATAGTGTGTAGAC
GGCAGTGGCTGCTGCAGTCGAAGACAATCCGATAGACGGTATGGAAAGAA
TAAGGGCGTGGTGGAGGAGTGATGAGACGAGGATGTGCCCCTGTCGATCT
TTGAAATTAAGAGAgcGAGAGAGAGCGGCATGGCGACTCTTCGAGAGAAA
TCGGATCTTGGGAAAATAAACGTTAAGGATATAGAACAAGAGTGACGCTG
CCAGGCTTGCGAGAAGGGCTGGGAGTGGTTGAGAGGCGAGAGGAAAACAA
TTTGCTGGGTGGAGGTCGGGAAAAACTCTTGATTAAATCGACTAGTATTT
GGCTTTGGGGGAGGCATATAGTCTACGCATAAACGGGAATAACAAGAAAA
AACAAGCACGTTTGAGGTGTCACGTTTGGAACCAACAGCAAACTAGACAT
GTTTTTGTTCTGTCTTTCCCAACACCGAAACGAATCAGAAAAAGTTTGAA
CAACACCATCGATCGATGTTTTCCCTTTGTTTGGGATACGTGGATACGAG
ATCCGATCTGGGACGTATGCTGTTGGGGGTTCAAGTGCAGAGTCCCTGGA
AATAAACCACGCACATGTTTACTTGCGTCTTTGCGTGCTTGAAAGGAGCA
CGGGTATGTGTTAGGCGAGGTTGATGTCATCAACATCGGTTCTGGGTTGA
CGTACCCCATACTCAACACAACGGTCGCTGACTAACATACCCGTGCTCCC
TCCAGCACACACGAAACGTGACTCGTGCCGAAGTGAACACATGTGCGTGC
TCTATTTCGAGGGCCCCGCACTTTAGACCCCCCACAGCCTCCCCCATTCA
CACATATTTTCCAGATCGGATATCGAATTCAAGTACTGTGGTGGTACCTT
TTAAGAGGGGACTCCGATTTGAGAGGATCGAAAATCGGTTTTCACGGATT
GGACCCACTACAGTACAGTGGGTACCCTCTTATTCCGGTATAAGAGGGGG
CACCGATATAGGAGGGGGCTCCGATATGAGAGAGGGTTGAGGGCCGTTGA
CACACCACCCTCTTATATCGGAGCCATGACTAAACCCCAAGCAACCCTGA
AGACTGCAACATGCAAGCTTCGCCGCGTTTACCAGCGTTCTTTCAACACC
GTGCACGATTGCTTGTTGCTCGATGGCGCAACAATGTCTTCAAGTATCAA
CTGCTGACGCTGTCGTGCTAATGTCACTTCCTTTTCCCCCGGCCACCGGT
CGGCGATTGTGTTCGATCCGATGTTGCTGTGTGGGGGTCGCGTGCAGCCT
TACCGAACGCGTTGCAGACTCGCGGGGGAACTACCATCAGCAGCAGCAGC
AGTAGCGTCGTCGCTGAGGACAATCGCAGATCGACGAGGCGGCGGTTATC
CGTGGTATGGGGGCGGTACCTAAACGCCCTCAACGACCAACCGTTGCTGA
CCAAGGCTCTCTCTTCGGGGGTTGTGTCGGGGACGGCTAACATCATCGAG
CAGACGCTGAGCGCCGCGAAATTCGTGAGTCAGGCGAGGGGTGTACTGAC
GTAAACGTATTGCCGTGTTTGTTAGACGATAGACCTCACATCCCCTACAA
TGCGGGGGCGGAGCTACAAGCCGGGTTTTCGCCATCCGGGGCTGCGTTTA
GCAAGGACGGACTAAGATACTCATGTTTTGCTGTCCTTTCCGTAGCTGTC
AGGCCATGACCACGCCTTTCGTGCCTCGGCTGTGGCCTATGTTTCCAAAA
GTCACACAGCAATCAATTTTTTGCCGTGTGGATGGGCGCATCACGGGTAG
AAGAGCGAACGGAACGTTCTGCATGCGCGGGCACGATGTGCGGCCAAGAC
CTTATTCATGTTCCTCCCTCCAGCCAGCGGAACGAAAATCCGATCCGGGT
CCGCGCAGAACTGACAGGCCCGCCTGGCGGAAACCCTTTGCTGTGCGCGC
GCTCCCCTCTCTTTTGGGTGCCAGGATTGGGGAGGTTGGGTGGTGTTCTC
CCTGACCGGGATCGTCTTCAAGGGGATGTTCCTGCACTACTGGTACAACA
TCCTAGATAGGTCAGTAAAAATGTAGACACGCATGTTTTTCACTTTTTTT
AAATGCTCGGGGACATGTGCTCTAGGGCACTTGCTTGTTGCACTCGCTGG
CCCTCGCTCCCGCTGTTACTGCGTGGCGTCAAGAGTCATGGCCGAGTTGA
AGGTTAGACAGCAGCCAAGATAATAATCGTACGATCAAGTTCGTTTCTTA
TTGGTTGCTTTGGCCGTTCCTTGCTCTGGTACCCGGGCTTGTGTCTATGA
CAGTATTGTATTCTTCTACTGAAGTAGGAACTGCCCTGGGTCGTTTTCTC
GCTTTGTTCACCCACCGGCCAGCTAGATGTACTCAAGGCTATGAGTACCC
CCCCCCGCCCCCCCTGCCAGCATTATATTCAAGCGGCCGTGCATACCCCG
ACGTTGTCGAGCCCACCCGTCACGCGCCCCTTCTCAGGTTAGGAAACGCG
AAAGCGGTGACGTCGAGAGTTCCGGGGAAATGGGGGCGCGTGTCCTTCCA
GGTGATCTTGGACACGATCATCGGGGCGACGCTCCTGAACTGCGGCTACT
TCGCGGTGCACGAGATATTCTCCGCGATAACGACGGGGAGACTCTTCCCG
CTGCCGGAGCTGGGGTTGCGCATTGTGGAAAAGGTCCGTTTCGTCGTCAT
TGGGCGTGTTCGAGGGCGAACTCGCCAGTATGCCTTCGCAGTTGTTTTTT
TTGGTAAAGTTAGAAAATGTTGGATGATGGATGCAATCGGGGAAGTTGGG
TTGGGGAATAGGACCTGCTGCGTACCCCCTTCCCTGTTCTAATTCCTTAT
TTGACGCAATTTCTCGCCCAGGCGGTCCCAATTTCTCGCAAAGACTGTCC
CGCCTTCCTTTGTTCTGTAGGATTTTTGTGTGTTTTGTGCTGCTGCGCAT
GTATAGGTTTCTTGTGTGCAGGAACGGCCATGCTGTCAGCGCGGAGCTCA
ACGCTCTTTGTTCAAAGTCACATCTGGATCCGGAGGGGAAGCAGCCGTGT
GCATGCCTCAGCAGCTTTGAGGCACTTCCTCCTTTTTTTTTTGTCAGCGG
CGTGAACTTTGTTGATCCAACCCCGGTCATCCACAATGCCACTCACGTTC
TGGTCGTGTTGACCGACCGTTTTTTTCTGCTGAACCTTTGCGATGTATTC
GTGACGCTTCAGGTACGACATCATTCTGTACTATTTTTCATTTTGCAGCC
CTTTTTTTTGGCACGAAAAATGAGCTTGTACATCGTGCAAGCGCTCGGCC
GCACGTCTTGTGTGCTGCAACTACCGCAGTCGCGGACTTTGTCGTCGCTT
GTATGCGAATCGGGTAGCAGGTGACCCACCCGTAGTGCACTACTTTGTAT
CGTCGTGGCGTTGCCCTGAGGGCGAAGATACGCAACGCGATCAGCAGCTA
ATATGAGCGGTTCTTTTCTCTTTCAAGTACCGCAAGGATGCGAAGGTTCA
CACAGCGGTGTCAGCGTTTGTTACAGCTTGATCGCTCCACAACCAGGAGG
GTCCGAACACCAACCAATAAAAGTACCTCTCAGGAAAGATCTCGATGAGA
CCCGTCCAAAGCGTCTATTTTCGTCCGTCTGTGGCCTGCTTGGTTGTAGC
GCATTCAAGCCGTAACAATCGGTAACACCCCTGCGCAAACCTCCGCATCC
GAGTGGTCTCGGGAGCGACGCGTGCCTGGGGGGCACCTGCGATGCTGACA
CAACCCCCGCCCCCGTCCCCCACGTTTTCCGCGTTCGCTCGCCCCCGTGA
AGATTGCAAGCAGGTATTCCGTGATGATGGTCGCCAACTGCAGAGTCTGG
CCGCCGGTGGTGTTCTTGAACTTCGCTTTCGTCCCCCCTAACCTTAGAGT
CCTGGTTTCCAATTTTGTCGCGGTGTTTTGGGGGTATTTGTTGTCCAAGT
GGTGTAGATAGAGGGTGAGCTTGCGGTTGCCGGAGGGACGAAAGGCCTCC
AGGCTCGCTACAACGTTAAGGCGAACGCTCCATTACCATGCCGGAAGGAC
CCTCGAATGCGTTGGGGTCCTCTTTCTGCTCCGGTTTTGTCGGGCTCTTT
CCTCCTCCTGCGGGGACCCCGCCGTGTCGGCCGCCGGCCCGCCGGCGAGT
CGTGGTGGCGCACAGGTTCTGATTGGTCAAATAATCCTTGCGGCGCTGTT
TTTTTCGACCAATCAGAGACGTGTGTGCCACCGTAGAAGGAGCGCATAGT
AGCCGAAGGACGACTGGGGCCATCCTGATGCGGCTGCGAGCTGATGGAAA
GGAAGGTGTGGGGGCGTTGGCAGATACTCATCCGCGTAAAAGAGAAAAAG
AGAGTCTTTGTCACTTGCAAGTTGGGGGGTGCCGTGCCTTGTTGTGTTTG
TTCGTTTTCCTTGCCTTGGCACCGACACGTGTCTCGCTGAGAGAAAGGTG
GCACGCAGTTTTCTGGTTGGTCAAAGTTCATTGCGGCGCCATGCTTTTAC
CAATCGGAAAACTGCGTGCCACGGTAGGAAGAGCGCATAGGAGCCAATGA
TAGAATGGGGCAATCTGACGTGGTTGCGAGTTGATGTAGAGGACATTGTG
GGGGCGTTGGCAGACACTCACCCGCGTAACAAAGAAAAAAATGTATCACT
TGCAAGTTGGGGTGTGCTGTCCCTTGTTGTGTGTCTTCGTTTTCATTCCC
GTGACCCCGACACGTGTCGCGCTGTACTTTTCGTGTTGATAATTATTTTG
ACGGTGCGCCGTGCGCATTTTTGCTTTTTTTTTACATGAAAATGCTCGCC
AATTGTTTTACCAGTTTTGTATGAACGCAGTTTGTGGTGGATCCCTACGT
AGACGTGGTGGGTGTTATGTTGCGGTTGTCGTCGTAGGGCTGAGTGCGCA
TGGTTCACAAGAGACACAGCCGCGTGCTGAGAAACGCCGAGATCCAGGGC
CGTTTGATCGGTGAACCTAGTCGGTATTTGCGAAGGCGTGCGTGTGTGTG
CGTGTGGTGGACTGTGGGCCTCGATGCGCGACTTCGCAGAGTGGTTTCTG
CTTGTTTTTTTTCGAAACGCTTTGGCAGAAGGCCTCTGACCAGGTGTCTG
CAACACCCCGAGTTGGG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:310785..318101+

>mRNA_Ecto-sp6_S_contig82.17422.1 ID=mRNA_Ecto-sp6_S_contig82.17422.1|Name=mRNA_Ecto-sp6_S_contig82.17422.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=876bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:310785..318101+ (Ectocarpus species6 EcLAC_371)
ATGCCCTTCCGACAGGGGATGGTAGACTTCAGGATGCTTGTCCCTCTGGG
GTTGGCAGCGCTCGTCCTCTCGACTCCGAGCGAAGCATTCTTCTCCTCGG
CAGGACGCCTGGGCGCGTCGTCTCAACGCCACCTGCTATTGCCGTCTTGC
GCAGGACGGCATGGGGGAGTGGCCCTCGACAAAGTAGCCAAGATGGCAAA
CGTAACAGCCTTACCGAACGCGTTGCAGACTCGCGGGGGAACTACCATCA
GCAGCAGCAGCAGTAGCGTCGTCGCTGAGGACAATCGCAGATCGACGAGG
CGGCGGTTATCCGTGGTATGGGGGCGGTACCTAAACGCCCTCAACGACCA
ACCGTTGCTGACCAAGGCTCTCTCTTCGGGGGTTGTGTCGGGGACGGCTA
ACATCATCGAGCAGACGCTGAGCGCCGCGAAATTCGATTGGGGAGGTTGG
GTGGTGTTCTCCCTGACCGGGATCGTCTTCAAGGGGATGTTCCTGCACTA
CTGGTACAACATCCTAGATAGGTTAGGAAACGCGAAAGCGGTGACGTCGA
GAGTTCCGGGGAAATGGGGGCGCGTGTCCTTCCAGGTGATCTTGGACACG
ATCATCGGGGCGACGCTCCTGAACTGCGGCTACTTCGCGGTGCACGAGAT
ATTCTCCGCGATAACGACGGGGAGACTCTTCCCGCTGCCGGAGCTGGGGT
TGCGCATTGTGGAAAAGATTGCAAGCAGGTATTCCGTGATGATGGTCGCC
AACTGCAGAGTCTGGCCGCCGGTGGTGTTCTTGAACTTCGCTTTCGTCCC
CCCTAACCTTAGAGTCCTGGTTTCCAATTTTGTCGCGGTGTTTTGGGGGT
ATTTGTTGTCCAAGTGGTGTAGATAG
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