prot_Ecto-sp6_S_contig82.17418.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig82.17418.1
Unique Nameprot_Ecto-sp6_S_contig82.17418.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length516
Homology
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BLAST of mRNA_Ecto-sp6_S_contig82.17418.1 vs. uniprot
Match: D7FZH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH7_ECTSI)

HSP 1 Score: 975 bits (2520), Expect = 0.000e+0
Identity = 500/515 (97.09%), Postives = 505/515 (98.06%), Query Frame = 0 
Query:    1 MKNHAFGTALVSLLAATATKGDAARRSSRPAFTFTAPAATPRCLSNSISSNRLGCRPCSKSQPATRPGGWPRVGTRRRVANVAVLGLADDGAAGPGLGETSLPDGTSRGRRQRHRPRPSGGGKRGGRFNRAAGVDGAGQAVRCAKLGAASVPSDFGGTEEAEDRCIRRLDLAVRRVFADYYSCTDVRETTESLGVFLKEATAALEVDCSTSRSGSVFPAHLASRLKARLLQTADRLNYHLDGDKPMVLYRLWNRGRPIDVYERDLLHCPRWIELVAETKRQMDNPPVVVEGGMGTICYPSGDIFEGHVDSLIRTAKAGEVHVAAASYPPQNARPFVDAELSSSADATASSRGLEGSSSGGDGGGAVTQDVRTVSGLVSLTIACLEEGMSDEATILQRHLQSPDFGHPLLRLASPSGNEPDHPHLPDDPEMNPELLRAEEELTEEHLALGERGAKELMHDRRRAQLDVYLICAAYRRNLPEVDDAASRGGWHLNEEDGRILDEMIREAAAMDSPWS 515
            MKNHAFGTALVSLLAA  TKGDAARRSSR AFTFTAPA TPRCLSNSISSNRLGCRPCSKSQPATRPGGWPRVGTRRRVANVAVLGLADDGA GPGLGETSLPDGTSRGRRQRHRPRPSGGGKRGG FNRAAGV GAGQAVRCAKLGAASVPSDFGGTEEAEDRCIRRLDLAVRRVFADYYSCTDVRETTESLGVFLKEATAALE+DCSTSRSGSVFPAHLASRLKARLLQTADRLNYHLDGDKPMVLYRLWNRGRPIDVY+RDLL+CPRWIELVAETKRQMDNPPVVVEG +GTICYPSGDIFEGHVDSLIRTAKAGEV +AAASYPPQNARPFVDAELSSSADATASSRGLEGSSSGGDGGGAVTQDVRTVSGLVSLTIACLEEGMSDEATILQRHLQSPDFGHPLLRLASPSGNEPDHPHLPDDPEMNPELLRAEEELTEEHLALGERGAKELMHDRRRAQLDVYLICAAYRRNLPEVDDAASRGGWHLNEEDGRILDEMIREAAAMDS WS
Sbjct:    1 MKNHAFGTALVSLLAAAVTKGDAARRSSRLAFTFTAPAPTPRCLSNSISSNRLGCRPCSKSQPATRPGGWPRVGTRRRVANVAVLGLADDGATGPGLGETSLPDGTSRGRRQRHRPRPSGGGKRGGWFNRAAGVGGAGQAVRCAKLGAASVPSDFGGTEEAEDRCIRRLDLAVRRVFADYYSCTDVRETTESLGVFLKEATAALELDCSTSRSGSVFPAHLASRLKARLLQTADRLNYHLDGDKPMVLYRLWNRGRPIDVYDRDLLNCPRWIELVAETKRQMDNPPVVVEGEIGTICYPSGDIFEGHVDSLIRTAKAGEVPLAAASYPPQNARPFVDAELSSSADATASSRGLEGSSSGGDGGGAVTQDVRTVSGLVSLTIACLEEGMSDEATILQRHLQSPDFGHPLLRLASPSGNEPDHPHLPDDPEMNPELLRAEEELTEEHLALGERGAKELMHDRRRAQLDVYLICAAYRRNLPEVDDAASRGGWHLNEEDGRILDEMIREAAAMDSRWS 515
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZH7_ECTSI0.000e+097.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..515
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:244584..247915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17418.1mRNA_Ecto-sp6_S_contig82.17418.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig82 244103..247915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17418.1 ID=prot_Ecto-sp6_S_contig82.17418.1|Name=mRNA_Ecto-sp6_S_contig82.17418.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=516bp
MKNHAFGTALVSLLAATATKGDAARRSSRPAFTFTAPAATPRCLSNSISS
NRLGCRPCSKSQPATRPGGWPRVGTRRRVANVAVLGLADDGAAGPGLGET
SLPDGTSRGRRQRHRPRPSGGGKRGGRFNRAAGVDGAGQAVRCAKLGAAS
VPSDFGGTEEAEDRCIRRLDLAVRRVFADYYSCTDVRETTESLGVFLKEA
TAALEVDCSTSRSGSVFPAHLASRLKARLLQTADRLNYHLDGDKPMVLYR
LWNRGRPIDVYERDLLHCPRWIELVAETKRQMDNPPVVVEGGMGTICYPS
GDIFEGHVDSLIRTAKAGEVHVAAASYPPQNARPFVDAELSSSADATASS
RGLEGSSSGGDGGGAVTQDVRTVSGLVSLTIACLEEGMSDEATILQRHLQ
SPDFGHPLLRLASPSGNEPDHPHLPDDPEMNPELLRAEEELTEEHLALGE
RGAKELMHDRRRAQLDVYLICAAYRRNLPEVDDAASRGGWHLNEEDGRIL
DEMIREAAAMDSPWS*
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