prot_Ecto-sp6_S_contig82.17411.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig82.17411.1
Unique Nameprot_Ecto-sp6_S_contig82.17411.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length270
Homology
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BLAST of mRNA_Ecto-sp6_S_contig82.17411.1 vs. uniprot
Match: A0A6H5L6J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J2_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 2.410e-59
Identity = 114/147 (77.55%), Postives = 116/147 (78.91%), Query Frame = 0 
Query:    1 MVKSVQAVLGGTEEPGGLGEGFVEACLSVLGWSPQGVIDAVLEDRLPPQVANLNRGLRRAWKGKKGDLDKAYRVDKDLAATEARRLIAMEKRQEDDAYLLSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSDFETVRRVNQLVR 147
            MVKSVQAVLGGT EPGGLGEGFVEACLSVLGWSPQGVI+AVLEDRLPPQVANLNRGLRRAWKGKKGDLDKAYRVDKDLAA EA+RLIAMEKRQEDDAYLLSR                             RGSDFETVRRVNQLVR
Sbjct:  346 MVKSVQAVLGGTGEPGGLGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQVANLNRGLRRAWKGKKGDLDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDDYDDQAWREYDDREVDVGGGGG---RGSDFETVRRVNQLVR 489
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BLAST of mRNA_Ecto-sp6_S_contig82.17411.1 vs. uniprot
Match: A0A836CBT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.920e-5
Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:    1 MVKSVQAVLGGTEEPGGLGEGFVEACLSVLGWSPQ 35
            M+  VQ V GG E+ GG+GEGFVEACLS++GWSPQ
Sbjct:  737 MIAEVQEVFGGPEQEGGVGEGFVEACLSLMGWSPQ 771
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6J2_9PHAE2.410e-5977.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBT6_9STRA2.920e-568.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 228..238
score: 39.77
coord: 128..139
score: 45.83
coord: 257..270
score: 40.79
coord: 200..215
score: 54.69
NoneNo IPR availableGENE3D1.10.8.10coord: 16..46
e-value: 5.5E-7
score: 31.1
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 18..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:125031..128183 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17411.1mRNA_Ecto-sp6_S_contig82.17411.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig82 125031..128183 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17411.1 ID=prot_Ecto-sp6_S_contig82.17411.1|Name=mRNA_Ecto-sp6_S_contig82.17411.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=270bp
MVKSVQAVLGGTEEPGGLGEGFVEACLSVLGWSPQGVIDAVLEDRLPPQV
ANLNRGLRRAWKGKKGDLDKAYRVDKDLAATEARRLIAMEKRQEDDAYLL
SREYDDDYDDQACWWWLCYDDREVDVGGGGGRGSDFETVRRVNQLVRHEE
EEDAWWENNKNTNLSVAAPKGGGWRARSHREQEGEEAEEKDAQEQASSAG
GGGGRGGGGRGVGGRGGGRGGGPPPGGRGREGGGGGRGGGGNNRSGSRGR
GRGGGSGGRDGGGGGRGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf