prot_Ecto-sp6_S_contig8.17194.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig8.17194.1
Unique Nameprot_Ecto-sp6_S_contig8.17194.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length197
Homology
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BLAST of mRNA_Ecto-sp6_S_contig8.17194.1 vs. uniprot
Match: A0A7S3M7S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7S9_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.250e-5
Identity = 26/87 (29.89%), Postives = 52/87 (59.77%), Query Frame = 0 
Query:   22 TLVVRAIDGEWVMGEDLILPVTGDETIVEIQQVVKCMKGVPLTRMVAFKEESESRISDKHMTWSLSRNGLYAGAVLVLRPSRPNQWL 108
            ++ +R +D +WVMGED ++ +    T+VEI+Q V+  +G+   R +  + + +   +++ + W+L R G+Y G V+ + P+    WL
Sbjct:   22 SVTLRPVDKDWVMGEDWVVDLHNQTTMVEIRQYVETHRGISKHR-IQLRMKGKVCPTNREI-WTLRRLGIYDGYVIQVEPTLSGAWL 106
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3M7S9_9STRA1.250e-529.89Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig8contigEcto-sp6_S_contig8:2692056..2693759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig8.17194.1mRNA_Ecto-sp6_S_contig8.17194.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig8 2692056..2693759 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig8.17194.1 ID=prot_Ecto-sp6_S_contig8.17194.1|Name=mRNA_Ecto-sp6_S_contig8.17194.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=197bp
MKRPDPIGNDDDDDEEEEEVRTLVVRAIDGEWVMGEDLILPVTGDETIVE
IQQVVKCMKGVPLTRMVAFKEESESRISDKHMTWSLSRNGLYAGAVLVLR
PSRPNQWLWHPLEWYEERLLKAAEDVASSSPWAEMGTGCPLSILEKEVLV
PPPLERDSLTGILRRFPDRLRLQLDVVSQKFVAFPNKDEMLLPSSY*
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