prot_Ecto-sp6_S_contig8.17190.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig8.17190.1
Unique Nameprot_Ecto-sp6_S_contig8.17190.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length2057
Homology
BLAST of mRNA_Ecto-sp6_S_contig8.17190.1 vs. uniprot
Match: D7G3I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I5_ECTSI)

HSP 1 Score: 1627 bits (4213), Expect = 0.000e+0
Identity = 1294/1586 (81.59%), Postives = 1301/1586 (82.03%), Query Frame = 0
Query:  476 MGSAEQQANLARVTLALKMAERKGSRFTSASAIFAAATAAAKGARVSTTREEAAGKSXXXXXXXXXXXXXXRSKTPKQRVPAXXXXXXXXXXXXXXXXXVQSSRPATRLSTPETHDAAAEHELYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNVKMEKKPLLRTKAVEDEVAGXXXXXXXXXXXXXXXXPPRTPIVVPAAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQQATAKAQREAENALRAMSEEFKRMEEGPGRGDDAAVXXXXXXXXSGTSFSEGEEGVDPRLQRGADGSPRARYDVSSSEGEDGDGAGPQPEVTGQVPLQLGAQQPQQPEPLLQQQQGQQPWQGEGSPRARYDVSSSDENGDGSEAGYVGGQAPVYSGASPMDEDXXXXXXXXXXXSSTPARYDVSSSDDTGSGAGVFEATVTDKSRAGGGVSSARNWADKEAPRGESPVIGRYDVSSSXXXXXXXXXXXXXXXXXEGIGGFDGSRDACPTPSPTGSLPLXXXXXXXXXXXEPFSSAVAAGDSGRSLEVDLAAAAAAGRYDVSSSDCXXXXXXXXXXXXXXXXSSFDVQEYNNFFAAKAVDGRSGGGLGLPNPVAVVPAGGPRGRAARRAAEIMEAVALAAEYRNXXXXXXXXXXXXXXXXXXXEYSPWDMDSEGGEESGDEVYAFAGRRQRRRLLPRSSARKVSHSGAEFEWEEVDLQDPLAEHKGLLDRLAGMGTPLPGPVVGSARGSXXXXXXXXXXXXXXXXXXXXVASASDAADGVPYANSRHPATTQSSSESSASPNPNNMKRVKKKSKNGHASRGVYAPPPXXXAGPPRRPVAVSNVDRAAGVGHWTNLMHSAGNVDPIELNPAKRAAAGAVAAAPGKKGGEGARSVPAPAAPVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVLNMKSFKLKQKSAVSAAFEMCAAMEPKSRPSFENKNKDAAKNISPFTLNVSVNGVAYSPATAKNTKLAKQLASINFLREAVGTREQLDLESLIAETTGGSLAGSAAIAAAISQGKPATGASGXXXXXXXXXSRXXSASDGGXXXXXXXXXSATGT-----DNDDDPVAKHALGDGLQNYAQLLHDLVAAHPETPNYASYMFRALKDNASQQKSKHTGKGFRCFARLLRHVVDPVETAKRKEVEAAKSAIEVAAKASLAEDPENEALKEAAREAHKDFLKHRAIPKLSIGVLSAEGDGANKRDAKHKAAQGLMYALMPKCKTDEDLRSQAKVVIEKYQAEKKVRMEKEQKAAQEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAAAIPHPETRGDRAMLNALTAAVKSAEDRRASEASLAEAGAGGGSASGXXXXXXXXXXXXXXXXXXXXXXAGAGXXXXXXXXXXXXXXXTGVVDEDGDAAGEEGSGASEAVPMAVAEDDGADDASAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEETPAVVVPAPAPASAAIVRSASTSSAPVTXXXXXXXXXXXXXGRPGTRAXXXXXXXXXXXXXXXXXXXXEDGGEADA 2056
            MGSAEQQANLARVTLALKMAERKGSRFTSASAIFAAATAAA+GARVSTTREE AGKS    XXXXXXXX  RSK PKQRVP XXXXXXXXXXXXXX    QSSRPATRLSTPET DAAAEHE YAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      XXXXXXXX        PPRTPIVVPAAPS  XXXXXXXXX      XXXXXXXXXXXXLQQATAKAQREAENALRAMSEEFKRMEEGPGRGDDAAV        SGTSF EGEEGVDPRLQRGADGSPRARYDVSSSEGEDGDGAGPQPEVTGQVPLQLGAQQP QP PLLQQ QGQQPWQGEGSPRARYDVSSSDENGDGS+AGYVGGQAPVYSGASPMDED XXXXX     SSTP              AGVFEATVTDKSRAGGGVSSAR+WAD+EAPRGESPVIGRYDVSSSXXXXXXXXXXXXXXXXXEGIGGFDGSRDACPTPSPTGSLPLXXXXXXXXXXXEPFSS VAAGDSGRS                                                                             GRAARRAAEIMEAVALAAEYRN XXXXXXXXXXXXXXXXXXEYSPWDMDSEGGEESGDEVYAFAGRRQRRRLLPRSSARKVSHSGAEFEW EVDLQDPLAEHKGLLDRLAGMGTPLPG    S+ GS      XXXXXXXXXXXXXXVASASDAADGVPYANSRHPATTQSSSESSASPNPNNMKRVKKKSKNGHASRGVYAPPPXXXAGPPRRPVAVSNVDRAAGVGHWTNLMHSAGNVDPIELNPAKRAAAGAVAAAPGKKGGEGARSVP P APVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVLNMKSFKLKQKSAVSAAFEMCAAMEPKSRPSFENKNKDAAKNISPFTLNVSVNGVAYSPATAKNTKLAKQLASINFLREAVGTREQLDLESLIAETTGGSLAGSAAIAAAISQGKPATG   XXXXXXXXX    S   GGXXXXXXXXX          DNDDDPVAKHALGDGLQNYAQLLHDLVAAHPETPNYASYMFRALKDNASQQKSK TGKGFRCFARLLRHVVDPVETAKRKEVEAAKSAIEVAAKASL EDPENEALKEAAREAHKDFLKHRAIPKLSIGVLSAEGDGANKRDAKHKAAQGLMYALMPKCKTDEDLRSQAKVVIEKYQAEKKVRMEKEQKAAQEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADP+AAIPHPETRGDRAMLNALTAAVKSAEDRRASEASLAE G                                                         DAAGEEGSGASEAVPMAVAEDDGADDASAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       AEETPAVVVPAPAPASAAIVRSAST+SAPV              GRPGTRAXXXXXXXXXXXXXXX      DGGEADA
Sbjct:    1 MGSAEQQANLARVTLALKMAERKGSRFTSASAIFAAATAAAQGARVSTTREEVAGKSSAKPXXXXXXXXSSRSKAPKQRVPXXXXXXXXXXXXXXX----QSSRPATRLSTPETQDAAAEHEPYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-------PPRTPIVVPAAPSPMXXXXXXXXXRAEYLAXXXXXXXXXXXXLQQATAKAQREAENALRAMSEEFKRMEEGPGRGDDAAVAAAAAGG-SGTSFLEGEEGVDPRLQRGADGSPRARYDVSSSEGEDGDGAGPQPEVTGQVPLQLGAQQPLQPAPLLQQ-QGQQPWQGEGSPRARYDVSSSDENGDGSDAGYVGGQAPVYSGASPMDEDEXXXXXDGS--SSTPXXXXXXXXXXXXXXAGVFEATVTDKSRAGGGVSSARDWADEEAPRGESPVIGRYDVSSSXXXXXXXXXXXXXXXXXEGIGGFDGSRDACPTPSPTGSLPLXXXXXXXXXXXEPFSSTVAAGDSGRS-----------------------------------------------------------------------------GRAARRAAEIMEAVALAAEYRNNXXXXXXXXXXXXXXXXXXEYSPWDMDSEGGEESGDEVYAFAGRRQRRRLLPRSSARKVSHSGAEFEWGEVDLQDPLAEHKGLLDRLAGMGTPLPGMPAPSS-GSVVGSARXXXXXXXXXXXXXXVASASDAADGVPYANSRHPATTQSSSESSASPNPNNMKRVKKKSKNGHASRGVYAPPPXXXAGPPRRPVAVSNVDRAAGVGHWTNLMHSAGNVDPIELNPAKRAAAGAVAAAPGKKGGEGARSVPPPPAPVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVLNMKSFKLKQKSAVSAAFEMCAAMEPKSRPSFENKNKDAAKNISPFTLNVSVNGVAYSPATAKNTKLAKQLASINFLREAVGTREQLDLESLIAETTGGSLAGSAAIAAAISQGKPATG---XXXXXXXXXXXKGSRGXGGXXXXXXXXXXXXXXXXXXXDNDDDPVAKHALGDGLQNYAQLLHDLVAAHPETPNYASYMFRALKDNASQQKSKLTGKGFRCFARLLRHVVDPVETAKRKEVEAAKSAIEVAAKASLGEDPENEALKEAAREAHKDFLKHRAIPKLSIGVLSAEGDGANKRDAKHKAAQGLMYALMPKCKTDEDLRSQAKVVIEKYQAEKKVRMEKEQKAAQEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSAAIPHPETRGDRAMLNALTAAVKSAEDRRASEASLAEGG---------------------------------------------------------DAAGEEGSGASEAVPMAVAEDDGADDASAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------AEETPAVVVPAPAPASAAIVRSASTASAPVAG------------GRPGTRAXXXXXXXXXXXXXXXPAETAADGGEADA 1414          
BLAST of mRNA_Ecto-sp6_S_contig8.17190.1 vs. uniprot
Match: A0A6H5KRH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH2_9PHAE)

HSP 1 Score: 1275 bits (3299), Expect = 0.000e+0
Identity = 1027/1335 (76.93%), Postives = 1051/1335 (78.73%), Query Frame = 0
Query:  107 MVTIATAPPGVVHPQAWAAAGQAGGGGGLQPAVVYSMQAPSRVQLPVHPWQQQQPQFXXXXXXXXXXXXHYYRGSAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGGARGDKKRERGEESELKGRGKGKATSKGGAKASRREADGGRVGQGEQLSSVAEPSSSRQRSRPSRETPRLPQPETAESIPLXXXXXXXXXXXXXXXXXXXXXXXXVSNPDHRSNVRVPRPAKLRLSSSLPRPSLPPFTLSEDGEVPPDAPPVTETTRGYEYEHRLMVXXXXXXXXXXXXXXXXX---PYPQHRIIPNSDLNAAGFARESKERGSRTPHQQPDLTSERAARTPTSTSLPSARRSQSLIRHMGSAEQQANLARVTLALKMAERKGSRFTSASAIFAAATAAAKGARVSTTREEAAGKSXXXXXXXXXXXXXXRSKTPKQRVPAXXXXXXXXXXXXXXXXXVQSSRPATRLSTPETHDAAAEHELYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNVKMEKKP---LLRTKAVEDEVAGXXXXXXXXXXXXXXXXPPRTPIVVPAAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQQATAKAQREAENALRAMSEEFKRMEEGPGRGDDAAVXXXXXXXXSGTSFSEGEEGVDPRLQRGADGSPRARYDVSSSEGEDGDGAGPQPEVTGQVPLQLGAQQPQQPEPLLQQQQGQQPWQGEGSPRARYDVSSSDENGDGSEAGYVGGQAPVYSGASPMDEDXXXXXXXXXXXSSTPARYDVSSSDDTGSGAGVFEATVTDKSRAGGGVSSARNWADKEAPRGESPVIGRYDVSSSXXXXXXXXXXXXXXXXX---EGIGGFDGSRDACPTPSPTGSLPLXXXXXXXXXXXEPFSSAVAAGDSGRSLEVDLAAAAAAGRYDVSSSDCXXXXXXXXXXXXXXXXSSFDVQEYNNFFAAKAVDGRSGGGLGLPNPVAVVPAGGPRGRAARRAAEIMEAVALAAEYRNXXXXXXXXXXXXXXXXXXXEYSPWDMDSEGGEESGDEVYAFAGRRQRRRLLPRSSARKVSHSGAEFEWEEVDLQDPLAEHKGLLDRLAGMGTPLPGPVVGSARGSXXXXXXXXXXXXXXXXXXXXVASASDAADGVPYANSRHPATTQSSSESSASPNPNNMKRVKKKSKNGHASRGVYAPPPXXXAGPPRRPVAVSNVDRAAGVGHWTNLMHSAGNVDPIELNPAKRAAAGAVAAAPGKKGGE--GARSVPAPAAPVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVLNMKSFKL 1430
            MVTIATAP GVVHPQ WA+AGQAGGGGGLQPAVVYSMQAPSRVQLPVHPWQQQQP +   XXXXXXX  HY RGS Q+             XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GGARGDKKRERGEESELK      ATSKGGAKASRREADGGRVGQ                                            XXXXXXXXXXXXXXXXXVSNPDHRSNVRVPRPAKLRLSSSLPRPSLPPFT SE GEVPPDA PVT+TTRGYEYEHRLM XXXXXXXXXXXXXXXXX   PYPQH IIP SDLNAAGFARESK+RGS TPHQQ DLTSERAARTPTSTS PSARRSQS IRHMGSAEQQ NLARVTLALKMAERKGSRFTSASAIFAAATAAAKGARVST REEAAG+S              RSK PKQRVPA                 V+SSRPATRLSTPETHDAAAEHE YA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            LLRTKA  DEVAGXXXXXXXXXXXXXXX    TPIVVPAAPS  XXXXXXXXX      XXXXXXXXXXX LQQATAKAQREAENALRAMSEEFKRMEEGPG  D    XXXXXXX  GTS+ E EEGVDPRLQ GADGSPRARYDVSSSEGE+GD AGPQPEVTGQVPLQLGAQQPQQP PLLQQ QGQQ  QG GSPRARYDVSSSDENGDG +A YVGGQAPV SGASPM+ED           SST              G G+ EATVTDKSRAGGGVSSAR+WADKE PRGESPVIGRYDVSSSXXXXXXXXXXXXXXXXX   EGIGGFDGSRDA PTPSPTGSLPL           EPFSSAVAAGDS RSLE+DLA+AAAAGRYD    DC   XXXXXXX      SSFDVQEY NFFAAKA+DG SGGGLGLPNP+AVVPAGGPRGRAARRAAEIMEAVAL AEYRN  XXXXXXXXXXXXXXX   YSPWD+DSEGGE+SGDEVY FAGRRQRRRLLPRSSARKV HSGAEFEW EVDL+DPLA HKGLLDRLAGMGTPLPG V   + GS      XXXXXXXXXXXXX VASASDAADGVPYANS HPATT SSSESSASPNPNN+KRVKKKSK GHASRGVYAP  XXX    RRPVAVS+VDRAAGVGHWTNLMHSAGNVDPIELNP KRAAA A              ARSVPAP  PVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVLNMKSFK+
Sbjct:    1 MVTIATAPSGVVHPQTWASAGQAGGGGGLQPAVVYSMQAPSRVQLPVHPWQQQQPHYQQDXXXXXXXPEHY-RGSPQKSGRSGWVGRGHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGARGDKKRERGEESELKXXXXXXATSKGGAKASRREADGGRVGQA------------------------------------------AXXXXXXXXXXXXXXXXXVSNPDHRSNVRVPRPAKLRLSSSLPRPSLPPFTSSEKGEVPPDALPVTKTTRGYEYEHRLMAXXXXXXXXXXXXXXXXXXXXPYPQHMIIPKSDLNAAGFARESKKRGSHTPHQQSDLTSERAARTPTSTSSPSARRSQSSIRHMGSAEQQTNLARVTLALKMAERKGSRFTSASAIFAAATAAAKGARVSTIREEAAGRSSAKPAASSSTERSSRSKAPKQRVPAPSPPAAAAVA-------VRSSRPATRLSTPETHDAAAEHEPYAVAACASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRTKAGTDEVAGXXXXXXXXXXXXXXX----TPIVVPAAPSPMXXXXXXXXXRAEYLAXXXXXXXXXXXELQQATAKAQREAENALRAMSEEFKRMEEGPGLDDXXXXXXXXXXXGLGTSYLEEEEGVDPRLQWGADGSPRARYDVSSSEGENGDDAGPQPEVTGQVPLQLGAQQPQQPAPLLQQ-QGQQQGQGGGSPRARYDVSSSDENGDGGDANYVGGQAPVCSGASPMEEDEDEEEYA----SSTXXXXXXXXXXXXXXGTGISEATVTDKSRAGGGVSSARDWADKETPRGESPVIGRYDVSSSXXXXXXXXXXXXXXXXXXXREGIGGFDGSRDASPTPSPTGSLPLGRYDVSSSDDDEPFSSAVAAGDSSRSLEIDLASAAAAGRYDXXXXDCRSSXXXXXXXTE----SSFDVQEYTNFFAAKAIDG-SGGGLGLPNPLAVVPAGGPRGRAARRAAEIMEAVALVAEYRNNRXXXXXXXXXXXXXXXEG-YSPWDIDSEGGEDSGDEVYTFAGRRQRRRLLPRSSARKVWHSGAEFEWAEVDLEDPLAAHKGLLDRLAGMGTPLPG-VPAPSSGSVVGSARXXXXXXXXXXXXXSVASASDAADGVPYANSLHPATTHSSSESSASPNPNNIKRVKKKSKKGHASRGVYAPXXXXXXXXXRRPVAVSDVDRAAGVGHWTNLMHSAGNVDPIELNPTKRAAAEAXXXXXXXXXXXXXSARSVPAPPVPVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVLNMKSFKV 1269          
BLAST of mRNA_Ecto-sp6_S_contig8.17190.1 vs. uniprot
Match: A0A6H5KYU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYU4_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 4.710e-30
Identity = 230/300 (76.67%), Postives = 232/300 (77.33%), Query Frame = 0
Query: 1761 MEKEQKAAQEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAAAIPHPETRGDRAMLNALTAAVKSAEDRRASEASLAEAGAGGGSASGXXXXXXXXXXXXXXXXXXXXXX-AGAGXXXXXXXXXXXXXXXTGVVDEDGDAAGEEGSGASEAVPMAVAEDDGADDASAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEETPAVVVPAPAPASAAIVRSASTSSAPVTXXXXXXXXXXXXXGRPGTRAXXXXXXXXXXXXXXXXXXXXE---DGGEADA 2056
            MEKEQKAAQEAK XXXXXXXXXXXXXXXXXXXXXXXXX  ADPAAAIPHPETRGDRAMLNALTAAVKSAEDRRASEASLAEA  GGGSA  XXXXXXXXXXXXXXXXXXXXXX AGAG XXXXXX        TGV+              SEAVPMAVAEDDGADDASAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              A ETPAVVVPAPAPASAAIVRSASTS+APV                PGTRA XXXXXXXXXXXXXXXXX  E   DGGEADA
Sbjct:    1 MEKEQKAAQEAKRXXXXXXXXXXXXXXXXXXXXXXXXXPAADPAAAIPHPETRGDRAMLNALTAAVKSAEDRRASEASLAEADGGGGSAXXXXXXXXXXXXXXXXXXXXXXXXDAGAGAXXXXXXAA------TGVMXXXXXXXXXXXXXXSEAVPMAVAEDDGADDASAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------AVETPAVVVPAPAPASAAIVRSASTSAAPVAG--------------PGTRATXXXXXXXXXXXXXXXXXPGETAADGGEADA 266          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G3I5_ECTSI0.000e+081.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRH2_9PHAE0.000e+076.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYU4_9PHAE4.710e-3076.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1754..1784
NoneNo IPR availableCOILSCoilCoilcoord: 719..757
NoneNo IPR availableGENE3D3.30.160.20coord: 1427..1505
e-value: 2.3E-5
score: 26.3
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 622..1299
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 1429..1501
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 1661..1734
score: 8.931
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 1434..1504
score: 9.174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig8contigEcto-sp6_S_contig8:2628413..2642256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig8.17190.1mRNA_Ecto-sp6_S_contig8.17190.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig8 2628413..2642256 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig8.17190.1 ID=prot_Ecto-sp6_S_contig8.17190.1|Name=mRNA_Ecto-sp6_S_contig8.17190.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=2057bp
MSWNSGGGGGADQSGRAPNAPQHYLQVGGVSQQGGMVLQQVSPTRQQQPG
GFVGVGYQQPQPQQQQQQQQQQQQGSQQVYISSGLAPPPMHQQQGANVTQ
PHQQPQMVTIATAPPGVVHPQAWAAAGQAGGGGGLQPAVVYSMQAPSRVQ
LPVHPWQQQQPQFQQDPQQPRYQPEHYYRGSAQQSGRGGWGGRGHGGGAG
RGSGASGRSIGSGLGSLGGWGAGGAAVVGGARGDKKRERGEESELKGRGK
GKATSKGGAKASRREADGGRVGQGEQLSSVAEPSSSRQRSRPSRETPRLP
QPETAESIPLPLPPSPPVAAAAAAEAAVAAAAAAVSNPDHRSNVRVPRPA
KLRLSSSLPRPSLPPFTLSEDGEVPPDAPPVTETTRGYEYEHRLMVAAAA
AQQYQQQQQQQQQPYPQHRIIPNSDLNAAGFARESKERGSRTPHQQPDLT
SERAARTPTSTSLPSARRSQSLIRHMGSAEQQANLARVTLALKMAERKGS
RFTSASAIFAAATAAAKGARVSTTREEAAGKSSAKPTASSSTERSSRSKT
PKQRVPAPSPPAAAAAAAAAAAVAVQSSRPATRLSTPETHDAAAEHELYA
AASASGGVLKKKSKKKKKKSVAPTATAAAAPPPASARAAAAPAAAAAADN
VKMEKKPLLRTKAVEDEVAGAGATAAAAAAAAAAALPPRTPIVVPAAPSP
MPAQQQPAPTRAEYLAVAAAKAKAKARELQQATAKAQREAENALRAMSEE
FKRMEEGPGRGDDAAVAAAAAAGGSGTSFSEGEEGVDPRLQRGADGSPRA
RYDVSSSEGEDGDGAGPQPEVTGQVPLQLGAQQPQQPEPLLQQQQGQQPW
QGEGSPRARYDVSSSDENGDGSEAGYVGGQAPVYSGASPMDEDEEEDEEE
EDGSSSTPARYDVSSSDDTGSGAGVFEATVTDKSRAGGGVSSARNWADKE
APRGESPVIGRYDVSSSEEEEKEDDSGIGGGGGGEGIGGFDGSRDACPTP
SPTGSLPLGRYDVSSSGDDEPFSSAVAAGDSGRSLEVDLAAAAAAGRYDV
SSSDCSSSSSSSSSSSSSSSESSFDVQEYNNFFAAKAVDGRSGGGLGLPN
PVAVVPAGGPRGRAARRAAEIMEAVALAAEYRNNHAAAAAGSAAEDGDDE
EEEYSPWDMDSEGGEESGDEVYAFAGRRQRRRLLPRSSARKVSHSGAEFE
WEEVDLQDPLAEHKGLLDRLAGMGTPLPGPVVGSARGSVVGSARGSVVGS
ARGSRSGSVASASDAADGVPYANSRHPATTQSSSESSASPNPNNMKRVKK
KSKNGHASRGVYAPPPAAAAGPPRRPVAVSNVDRAAGVGHWTNLMHSAGN
VDPIELNPAKRAAAGAVAAAPGKKGGEGARSVPAPAAPVVEPPKPMKEFP
PGSGKMVLDELAHARMYPGGAVLNMKSFKLKQKSAVSAAFEMCAAMEPKS
RPSFENKNKDAAKNISPFTLNVSVNGVAYSPATAKNTKLAKQLASINFLR
EAVGTREQLDLESLIAETTGGSLAGSAAIAAAISQGKPATGASGGGAKGG
AKGSRGGSASDGGGGSGKGTEGSATGTDNDDDPVAKHALGDGLQNYAQLL
HDLVAAHPETPNYASYMFRALKDNASQQKSKHTGKGFRCFARLLRHVVDP
VETAKRKEVEAAKSAIEVAAKASLAEDPENEALKEAAREAHKDFLKHRAI
PKLSIGVLSAEGDGANKRDAKHKAAQGLMYALMPKCKTDEDLRSQAKVVI
EKYQAEKKVRMEKEQKAAQEAKRAREAAKKAKKAGAAAGRATAAASRVPA
ADPAAAIPHPETRGDRAMLNALTAAVKSAEDRRASEASLAEAGAGGGSAS
GNGGGSAGDGGGSAGDGGGPAGDAGAGAGAGAGAGAGAGAAATGVVDEDG
DAAGEEGSGASEAVPMAVAEDDGADDASAPADAAGVPADETGVTADANGG
SANANGVPADANGVPADANGVPADANGAEETPAVVVPAPAPASAAIVRSA
STSSAPVTGTAPVTGATPVAGGRPGTRATRASAAAAVAAVTAAPAETAED
GGEADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom