prot_Ecto-sp6_S_contig8.17109.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig8.17109.1
Unique Nameprot_Ecto-sp6_S_contig8.17109.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length269
Homology
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BLAST of mRNA_Ecto-sp6_S_contig8.17109.1 vs. uniprot
Match: D7G3P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P9_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 5.780e-75
Identity = 130/148 (87.84%), Postives = 132/148 (89.19%), Query Frame = 0 
Query:   73 MIMDDEAPAYNAGLLRDTTAASPAAPSTVARVSPQNRQVQFSRSEAEMLRMKEELLNLELPRIDDGAEEESGEATWRNACEMVKGVVGYDGYRLQRRNKLKLYSGTAAGNRPLRNRWRTVLIVCDQGGKPDRRSRVVQNSPKDTTSKK 220
            MIMDDEAPAYNAGLLRDTTAASPAAPSTVARVSPQ+R+VQFSRSEAEMLRMKEELLNLELP IDDGAEEESGEATWRNA            YRLQRRNKLKLYSGTA G RPLRNRWRTVLIVCDQ GKPDRRSRVVQNSPKDTTSKK
Sbjct:    1 MIMDDEAPAYNAGLLRDTTAASPAAPSTVARVSPQDRKVQFSRSEAEMLRMKEELLNLELPHIDDGAEEESGEATWRNA------------YRLQRRNKLKLYSGTADGKRPLRNRWRTVLIVCDQDGKPDRRSRVVQNSPKDTTSKK 136
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BLAST of mRNA_Ecto-sp6_S_contig8.17109.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 3.010e-18
Identity = 53/132 (40.15%), Postives = 76/132 (57.58%), Query Frame = 0 
Query:  116 SEAEMLRMKEELLNLELPRIDDGAEEESGEATWRNACEMVKGVVGYDGYRLQRRNKLKLYSGTAAGNRPLRNRWRTVLIVCDQGGKPDRRSRVVQNSPK-DTTSKKLGCKFQVMLNWPAQKQAPVISTACSC 246
            S  ++  ++ E+ NL  P ++ G++++ GEAT  NA  M+K  +G  GY LQR NK KLY+         RNRW  V IVC Q G P  R RV   S + +T+S+K+GC F+V L W A   AP+++    C
Sbjct:   83 SPEDLATLQGEVENLLFPNLEQGSQQQFGEATIENAVGMLKAKIGR-GYPLQRHNKTKLYTRKQEAEHGRRNRWNYVEIVCPQAGSPRARERVANASARRNTSSEKIGCAFEVGLWWAANSPAPIVAKGKLC 213
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3P9_ECTSI5.780e-7587.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXK5_9PHAE3.010e-1840.15SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig8contigEcto-sp6_S_contig8:1750314..1754635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig8.17109.1mRNA_Ecto-sp6_S_contig8.17109.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig8 1750314..1754636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig8.17109.1 ID=prot_Ecto-sp6_S_contig8.17109.1|Name=mRNA_Ecto-sp6_S_contig8.17109.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=269bp
RKGIAAARADTRYPRHGLFRHAQSTTRWCGGHYYTVCLSADSTVTSIEAA
ATPRGMAQRGDSEAHGQGGEEAMIMDDEAPAYNAGLLRDTTAASPAAPST
VARVSPQNRQVQFSRSEAEMLRMKEELLNLELPRIDDGAEEESGEATWRN
ACEMVKGVVGYDGYRLQRRNKLKLYSGTAAGNRPLRNRWRTVLIVCDQGG
KPDRRSRVVQNSPKDTTSKKLGCKFQVMLNWPAQKQAPVISTACSCRSLL
YVVELALEKEDDTTPPYRG
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