prot_Ecto-sp6_S_contig8.17031.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig8.17031.1
Unique Nameprot_Ecto-sp6_S_contig8.17031.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length347
Homology
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BLAST of mRNA_Ecto-sp6_S_contig8.17031.1 vs. uniprot
Match: D7FYX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX4_ECTSI)

HSP 1 Score: 551 bits (1421), Expect = 4.680e-196
Identity = 313/337 (92.88%), Postives = 316/337 (93.77%), Query Frame = 0 
Query:    1 SVVVEVLILYGAALSAVKAFFPRSPSDENIHRKTTRPRPRSVVNRQERALVVWNPPANAAVVGAESHALPPAREXXXXXXXXXTDLKFALGAGTSRYLRTLVFPSSGAANPFSRQTPISEITGLRMATHAHRPTPVVLLLGASQPSSWCPVRLATERCPLPIAPANSARCGEEDEELPTAAAQPVTGASIVANVVGQLGIDLVFPAVGMAVSAHAGRRAAACSSSVLRSLENSRCDATAAVAGQQPRQSSAGSRGRTSATGERRTRNSSRSXSPSPPRRSRGRPQSPWRSASPAPHPVAVGVFPYRPVAPSSPLAMENSAADDDLCAVSAMTTSPLI 337
            SVVVEVL+LYGAALSAVKAFFPRSPSDENIHRKTTRPRPRSVVNRQERALVVWNPPANAAVVGAESHALPPAREXXXXXXXXXTDL F LGAGTSRYLRTLVFPSSGAANPF RQTPISEITGLRMATHAHRPTP VLLLGASQP  WCPVRLATERCPLPIAPANSA CGEED+ELPTAAAQPVTGASIVANVVGQLGIDLVFPAVG+AVSA AGRRAAA SSSV RSLENSRCDATAAVAGQQP  SS GSRGRTSATGERRTR SSRS SPS P RSRGRPQSP RS SPAP PVAVGVFPYRPVAPSSPLAMENSA DDDLCAVSAMTTSPLI
Sbjct:    2 SVVVEVLLLYGAALSAVKAFFPRSPSDENIHRKTTRPRPRSVVNRQERALVVWNPPANAAVVGAESHALPPAREXXXXXXXXXTDLMFPLGAGTSRYLRTLVFPSSGAANPFPRQTPISEITGLRMATHAHRPTPAVLLLGASQPFPWCPVRLATERCPLPIAPANSASCGEEDKELPTAAAQPVTGASIVANVVGQLGIDLVFPAVGIAVSARAGRRAAAFSSSVFRSLENSRCDATAAVAGQQPHHSSTGSRGRTSATGERRTRKSSRSRSPSLPPRSRGRPQSPLRSVSPAPRPVAVGVFPYRPVAPSSPLAMENSAVDDDLCAVSAMTTSPLI 338
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BLAST of mRNA_Ecto-sp6_S_contig8.17031.1 vs. uniprot
Match: A0A6H5K0H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H3_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 6.160e-88
Identity = 183/295 (62.03%), Postives = 199/295 (67.46%), Query Frame = 0 
Query:   23 RSPSDENIHRKTTRPRPRSVVNRQERALVVWNPPANAAVVGAESHALPPAREXXXXXXXXXTDLKFALGAGTSRYLRTLVFPSSGAANPFSRQTPISEITGLRMATHAHRPTPVVLLLGASQPSSWCPVRLATERCPLPIAPANSARCGEEDEELPTAAAQPVTGASIVANVVGQLGIDLVFPAVGMAVSAHAGRRAAACSSSVLRSLENSRCDATAAVAGQQPRQSSAGSRGRTSATGERRTRNSSRSXSPSPPRRSRGRPQSPWRSASPAPHPVAVGVFPYRPVAPSSPLAME 317
            RS +DEN+HRKTTRPRPR+V  +QERALVVW PPA+AA VGAES AL PAR XXXXXXXXX                         ++  SR    S+        H+H PTP +L+LG SQPS W PV LATERCPLPIAPANSA CGE ++E P  AA PVTG SIV NVVGQLG+D VFPA+GMAV                      RCDATAAVAGQQP  SSAGSRGRTS TGERRTRNSSR  SPSPP RSRGRPQSP RS+SPA  PVAV VFPYRPVA S PLAME
Sbjct:   11 RSATDENVHRKTTRPRPRNVAKQQERALVVWTPPAHAADVGAESPALVPARXXXXXXXXXXN-----------------------RSHVRSRCRHFSD-------GHSHWPTPALLVLGTSQPSLWYPVSLATERCPLPIAPANSASCGEAEDEPPMEAAPPVTGVSIVPNVVGQLGVDFVFPAIGMAV----------------------RCDATAAVAGQQPHHSSAGSRGRTSVTGERRTRNSSRPRSPSPPPRSRGRPQSPLRSSSPATRPVAVRVFPYRPVASSRPLAME 253
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYX4_ECTSI4.680e-19692.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0H3_9PHAE6.160e-8862.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig8contigEcto-sp6_S_contig8:965452..967456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig8.17031.1mRNA_Ecto-sp6_S_contig8.17031.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig8 965450..967456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig8.17031.1 ID=prot_Ecto-sp6_S_contig8.17031.1|Name=mRNA_Ecto-sp6_S_contig8.17031.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=347bp
SVVVEVLILYGAALSAVKAFFPRSPSDENIHRKTTRPRPRSVVNRQERAL
VVWNPPANAAVVGAESHALPPARETALVAWSPPTDLKFALGAGTSRYLRT
LVFPSSGAANPFSRQTPISEITGLRMATHAHRPTPVVLLLGASQPSSWCP
VRLATERCPLPIAPANSARCGEEDEELPTAAAQPVTGASIVANVVGQLGI
DLVFPAVGMAVSAHAGRRAAACSSSVLRSLENSRCDATAAVAGQQPRQSS
AGSRGRTSATGERRTRNSSRSRSPSPPRRSRGRPQSPWRSASPAPHPVAV
GVFPYRPVAPSSPLAMENSAADDDLCAVSAMTTSPLIPPSATWPVTG
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