prot_Ecto-sp6_S_contig110.1476.1 (polypeptide) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: A0A6H5JA94_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA94_9PHAE) HSP 1 Score: 765 bits (1976), Expect = 4.420e-271 Identity = 444/656 (67.68%), Postives = 470/656 (71.65%), Query Frame = 0
Query: 29 TNASSVVWRTRGGRFGSGGPRMAAGGVVAGDSVGDAPFPTPEPTASTVARGDGSSSRPLPRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRQFAAGSGLAPPSSAGH---------------RHLGSRHRRQG------GGYPSIDQRDHQAAR--ADPSDGNRFSTGPKEEEQGPTPSRKTDQRHRQHQDPGLPRSVNDSGDGGVGGSNGIGSVTRNAASREGNTSDPRVRNRSGRRTAAAAAAETGAVENAVGAITKRYRALVQVLPGRSPLKASPIPMTHFQKVSRRAPKEFRRDRPPQPNATSNARSADTPGAGEDDEGSWIECRLLVLSASEASVSPVVTSAGFPSRTGGSIKGGSADGGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPAARETSPTGPAATAASAAATTPVVVGGRTASATKPRPTGG-----------------TFVLRRSPAPAAAAAEHGFVTKEESVRQPGLQAGFQRDENDSRSGFVESPKMALQASHISLEFEAEDGRRERHVFTLARDTCWWFDEGWGACVSDE 644
T ASSV+WRTRGGRF SGG R+ A GVVAGDSVGD PFPTP PTAST ARGD S SRPLPRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFP+PRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIR G L P + R + +R G P +R ++A R A +DG P EE T + + + P + R++ T+ A+ G A AAAAETGAV+NAVGAITKRYRALV+VLPG SPLKASPIP+THFQKVSRRAPK+FRRDRPPQP ATSNAR ADTPG GEDDEGSWIECRLLVLSASEASVS VVT AGFP+RTG SIKGG GVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGD LYGPA RETSPTGPA AA+AA TTP VVGG TFVLRRSPAPAAAA E G V +EE+VRQ GLQAGFQ DE R GFVESPKMALQA HISLE EAEDG RERH FTLARDTCWW DEG GACVS E
Sbjct: 4 TIASSVIWRTRGGRFNSGGARIGAEGVVAGDSVGDDPFPTPAPTASTAARGDESGSRPLPRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPKPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRGVRPGLDLLLPHRLDNDTSGLVIVAKGADTLRSINEIIKRPGLMLQTGDDSPRDRRRKNKALRRAAKLADGTANIKTPVSEEASMTEAAAATESEALPETPQVGRAI---------------PPTQAFATGAG---------------AEAAAAETGAVQNAVGAITKRYRALVEVLPGSSPLKASPIPLTHFQKVSRRAPKDFRRDRPPQPKATSNARLADTPGGGEDDEGSWIECRLLVLSASEASVSSVVTPAGFPTRTGDSIKGGXXXXGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDNLYGPAVRETSPTGPAEPAATAAETTPAVVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFVLRRSPAPAAAATEPGLVVEEEAVRQVGLQAGFQGDETSCRGGFVESPKMALQACHISLELEAEDGGRERHAFTLARDTCWWVDEGRGACVSAE 629
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: D7G4K2_ECTSI (Putative RNA pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K2_ECTSI) HSP 1 Score: 717 bits (1851), Expect = 2.890e-253 Identity = 420/625 (67.20%), Postives = 440/625 (70.40%), Query Frame = 0
Query: 50 MAAGGVVAGDSVGDAPFPTPEPTASTVARGDGSSSRPLPRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRQFAAGSGLAPP-----SSAGHRHLGSRHRRQGGGYPSIDQRDHQAARADPSDGNRFSTGPKEEEQGPTPSRKT---DQRHRQHQDPGLPRSVNDSGDGGVGGSNGIGSVTRNAASREGNTSDPRVRNRS---------GRRTAAAAA-------------AETGAVENAVGAITKRYRALVQVLPGRSPLKASPIPMTHFQKVSRRAPKEFRRDRPPQPNATSNARSADTPGAGEDDEGSWIECRLLVLSASEASVSPVVTSAGFPSRTGGSIKGGSADGGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPAARETSPTGPAATAASAAATTPVVVGGRTASATKPRPTGGTFVLRRSPAPAAAAAEHGFVTKEESVRQPGLQAGFQRDENDSRSGFVESPKMALQASHISLEFEAEDGRRERHVFTLARDTCWWFDEGWGACVSDE 644
MAAG VVAGDSVGDAPFPTPEPTASTVARGDG+SSRPLPRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPA AKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIR L P ++G + +R+ G + ++ A + G E + P +T R R+ ++ L R+ + G+ I + AS T+ S GR A AETGAVENAVGAITKRYRALVQVLPGRSPLKASPIPMTHFQKVSRRAPKEFRRDRPPQPNATSNARSADTPG GEDDEGSWIECRLLVLSASEASVSPVVTSAGFPSRTGGSIKGG DGGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPA EESVRQPGLQAGFQRDENDSRSGFVESPKMALQASHISLE EAEDGRRERHVFTLARDTCWWFDEGWGACVSDE
Sbjct: 1 MAAGVVVAGDSVGDAPFPTPEPTASTVARGDGTSSRPLPRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPALAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRSVRPDLDLLLPHRLDIDTSGLVIVVTRNL----GVQELGLARNRTKHAGRAKGAGTLRSINEIIKRPGLILRTGIDSPRDRRRKNKALRRAAKLTN-----GTANIKTPVYQEASMTAATAASAAAAESEALPETSQVGRAIPPTQAFATGAGXXXXXXXAETGAVENAVGAITKRYRALVQVLPGRSPLKASPIPMTHFQKVSRRAPKEFRRDRPPQPNATSNARSADTPGGGEDDEGSWIECRLLVLSASEASVSPVVTSAGFPSRTGGSIKGGIGDGGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPA-------------------------------------------------------------EESVRQPGLQAGFQRDENDSRSGFVESPKMALQASHISLELEAEDGRRERHVFTLARDTCWWFDEGWGACVSDE 555
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: A0A836C7F4_9STRA (Pseudouridine synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7F4_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.100e-22 Identity = 55/139 (39.57%), Postives = 76/139 (54.68%), Query Frame = 0
Query: 96 DYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRQFAAGSGLAPPSSAGHR 234
+Y RHAY+P W + LG E AR +I FGG Y P P K +R DP + G+Y+RI P PR+YP DW++ ++ + MLVNKPA VP+H TVDN N++A ++ G+ + SA HR
Sbjct: 10 EYARHAYAPSDAAAWQVLVDVLGVDESRARYIIVFGGFYLMP---PGDVKARRVSDPTHAMTKGQYMRIHPMPRQYPVCATTDWDASVLQENDWCMLVNKPAAVPSHPTVDNLHHNVVACLKPLRPGTQI----SAAHR 141
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: A0A6U0VH21_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VH21_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.450e-14 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 0
Query: 136 KPGGAPASAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRQFAAGSGLAPPSSAGHR 234
KP G +P+R LDP +E G+Y+R++P P RYP LG+DW+ +I+ A ++V+KPAG+P+HAT DN EN L +R AG + HR
Sbjct: 32 KPSGY---RRPERVLDPGFPLEPGDYVRVYPVPARYPEALGIDWDKRILRMDADFVVVDKPAGIPSHATKDNLRENTLEQLRLHFAGEAFSDALRLPHR 127
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: K7PEZ7_9BACT (Pseudouridine synthase n=1 Tax=uncultured bacterium TaxID=77133 RepID=K7PEZ7_9BACT) HSP 1 Score: 79.0 bits (193), Expect = 2.200e-12 Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = 0
Query: 98 VRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIR 217
V H + A L + G T E L++FG VY + ++ +D DR + G+Y+R+ P+R+P G+DW + IV+ ++VNKPAG+P HAT+DN EN+L +R
Sbjct: 11 VGHYVAKEATTLVECLVQHFGLTTEEGERLVSFGSVY----------QDRQRVDSDRALSPGQYIRVHLNPKRFPVE-GIDWATTIVHRDKAFVVVNKPAGIPVHATLDNQVENLLHQLR 119
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: A0A2H0WDZ0_9PROT (RluA family pseudouridine synthase n=1 Tax=Bdellovibrio sp. CG10_big_fil_rev_8_21_14_0_10_47_8 TaxID=1975526 RepID=A0A2H0WDZ0_9PROT) HSP 1 Score: 74.3 bits (181), Expect = 8.480e-11 Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = 0
Query: 98 VRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRQF 219
VRH SP G L + LG T + R L+ G +Y + K E E++ YLRI PRR+P ++ +VY+ G+ +VNKPAG+P H +VDN EN+L ++QF
Sbjct: 20 VRHLLSPLNGTLEQVLEKSLGLTSDQTRALLHLGAIYLQ-------GKRLNESAQQTEIKAQTYLRIHQTPRRFP-IEKLNPTQCLVYEDDGLFIVNKPAGLPVHPSVDNIQENVLTLLKQF 133
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: A0A7S0TTK8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TTK8_HEMAN) HSP 1 Score: 71.6 bits (174), Expect = 2.440e-10 Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 0
Query: 98 VRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAE 210
VRH +GPL + + L EE A+ L+ G V+ A A + V G YLR+ P PRR+P DW+ ++V+ + ++VNKP G+P HA++DN E
Sbjct: 41 VRHLAINLSGPLCAHLTDLLDMDEEHAKWLVDMGAVFIDKVRVGAGAY-------NAIVPQGSYLRVHPSPRRFPVAWTADWQKRLVHVNSNYVIVNKPGGLPCHASLDNAKE 146
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: A0A8J5XJB9_DIALT (PseudoU_synth_2 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJB9_DIALT) HSP 1 Score: 73.6 bits (179), Expect = 3.320e-10 Identity = 48/127 (37.80%), Postives = 60/127 (47.24%), Query Frame = 0
Query: 108 PLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRQFAAGSGLAPPSSAGHR 234
P S+VA L E A L G VY GG +R LDP V ++R+ PRRYPA DW +V+D +++NKP GVP HATVDN E A + G+ L P HR
Sbjct: 58 PAASTVAQLLELDEAHAAWLCALGAVYV--GG-------ERALDPRAPVGANAHVRVHTRPRRYPAADATDWRRAVVHDGGSFVVLNKPRGVPTHATVDNVVETCQAQL-----GALLGVPLGCPHR 170
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: I0Z561_COCSC (Pseudouridine synthase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z561_COCSC) HSP 1 Score: 70.9 bits (172), Expect = 1.990e-9 Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 0
Query: 103 SPRAGPLWSSVAAFLGWTEELARGLITFGGVYY----KPGGAPASAKPKR--ELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENM 212
+PR G L A T ++ GLI G VYY PG AP + R E P ++ G+++R+ P P+RYPA DW +++++ A +VNKPA +P + N E +
Sbjct: 39 APREGTLLEIAAEVSDLTLDVVSGLIDLGAVYYGETEAPGQAPKWRRANRLAEAAPHHPIKQGQWVRVHPNPKRYPAAQTTDWAARVIHLDADFCVVNKPARIPVQSHESNSVETV 154
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Match: A0A8J9WNS2_9CHLO (RNA pseudouridine synthase 6, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNS2_9CHLO) HSP 1 Score: 69.7 bits (169), Expect = 7.120e-9 Identity = 42/148 (28.38%), Postives = 69/148 (46.62%), Query Frame = 0
Query: 74 STVARGDGSSSRPLPRLNAPPHD---YVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYY-KPGGAPASAKPKR-----ELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENM 212
++ G+ +P PR+ P + +PR G L G + LI G VYY P + K +R E D ++ G+++R+ P P+RYPA VDW +++++ A + +VNKPAG+P + N E +
Sbjct: 40 ASTTEASGNVWQPPPRIQKQPGGEDVVIIREPAPRDGTLLDIATEVSGLHCASVQELIDLGAVYYGDPAACDEAPKWRRANRLAEAAQDHPIQQGQWIRVHPNPKRYPAAQAVDWAARVIHLDADICVVNKPAGIPVQSHESNSVETV 187 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp6_S_contig110.1476.1 ID=prot_Ecto-sp6_S_contig110.1476.1|Name=mRNA_Ecto-sp6_S_contig110.1476.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=645bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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