prot_Ecto-sp6_S_contig110.1472.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig110.1472.1
Unique Nameprot_Ecto-sp6_S_contig110.1472.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length428
Homology
BLAST of mRNA_Ecto-sp6_S_contig110.1472.1 vs. uniprot
Match: A0A6H5JEZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEZ4_9PHAE)

HSP 1 Score: 479 bits (1234), Expect = 6.630e-165
Identity = 336/439 (76.54%), Postives = 346/439 (78.82%), Query Frame = 0
Query:    1 MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAALPAGSKPAAADASXXXXXXXXXASGDNKGAKREGEVVEGYSEAERGSAGTAGGRPIAEGRVAREETREGGAEGNTEPPLSPPGRGEQGERVASRAAAXXXAMA----RGEEGRGEPPERKARRRKEAGDDALEGPPVAAGRVSEGATSAGGDGRGSXXXXXXXXXXXXXXXXXGDEGAGGDADGRTSGPVDSQQAVGAAAQSDGKA-GQTNTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAYADALTATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVV-------GGVGGTVGATIVAAGGTIPISDDQLPYDGDCAAGDERLMSWRQTPYMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ 427
            MRFKKTSAK GAAATVDG QALDPKLQKRAEQAPASYEL NDDAA PA ++PAA    XXXXXXXXX SGDNK A+REGEVV  YSEA RGS GTAGGRPIAEGRVAREETREGG E NTEPPLSP G  EQ ERVASRA  XXX +A    RGEEGR E  ER ARRRKEAG++ALE P  AAGRVSEGATSAGGDGRGS              XXX       DAD  TSGPVDSQQ+VGAAAQ DG   GQTNT PP  AIPSKPARTLADVAAFVEADSIAAEKAYADAL ATAT             XX  XXXXXXXXXXXXXXXXX           GGVGGTVGATIVAAGGTIP+SDDQL YDGDCAAGDER+MSWRQTP+MAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ
Sbjct:    1 MRFKKTSAKTGAAATVDGEQALDPKLQKRAEQAPASYELTNDDAASPADNEPAAXXXXXXXXXXXXXTSGDNKDAEREGEVVGAYSEAARGSVGTAGGRPIAEGRVAREETREGGVEENTEPPLSPSGSDEQEERVASRAXXXXXXVAGHTARGEEGRSESSERTARRRKEAGNNALEDPRGAAGRVSEGATSAGGDGRGSAASIAGDGHAAAVAXXXXXXXXXXDADVGTSGPVDSQQSVGAAAQIDGHTKGQTNTPPPPPAIPSKPARTLADVAAFVEADSIAAEKAYADALIATATAAQSQETSSQSGEXXRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVGGTVGATIVAAGGTIPVSDDQLLYDGDCAAGDERVMSWRQTPHMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ 439          
BLAST of mRNA_Ecto-sp6_S_contig110.1472.1 vs. uniprot
Match: D7G4J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J9_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 2.890e-151
Identity = 296/428 (69.16%), Postives = 304/428 (71.03%), Query Frame = 0
Query:    1 MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAALPAGSKPAAADASXXXXXXXXXASGDNKGAKREGEVVEGYSEAERGSAGTAGGRPIAEGRVAREETREGGAEGNTEPPLSPPGRGEQGERVASRAAAXXXAMARGEEGRGEPPERKARRRKEAGDDALEGPPVAAGRVSEGATSAGGDGRGSXXXXXXXXXXXXXXXXXGDEGAGGDADGRTSGPVDSQQAVGAAAQSDGKA-GQTNTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAYADALTATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVVGGVGGTVGATIVAAGGTIPISDDQLPYDGDCAAGDERLMSWRQTPYMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ 427
            MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAA             XXXXXXXXX SGDNKGA+REGEVVEGYSEA+RGSAGTAGGRPIAEGRVAREET+EGGA GNTEPPLSPPG GEQ ERVA RAAA   A+ARGEEGRG                          RVSEGATSAGGDGRGS          XXXXXXX DEGAGGDAD RTSGPVDSQQ+VGAAAQSDG+A GQTNTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAY DALTATAT                                                              L YDGDCAAGDER+MSWRQTP+MAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ
Sbjct:    1 MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAAXXXXXXXXXXXXXXXXXXXXXXXSGDNKGAEREGEVVEGYSEADRGSAGTAGGRPIAEGRVAREETQEGGAGGNTEPPLSPPGSGEQRERVAPRAAAAA-AVARGEEGRG--------------------------RVSEGATSAGGDGRGSAAAIAGDDHAXXXXXXXSDEGAGGDADVRTSGPVDSQQSVGAAAQSDGQAKGQTNTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAYTDALTATATAAQSQ-----------------------------------------------------ESSSLLYDGDCAAGDERVMSWRQTPHMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ 348          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEZ4_9PHAE6.630e-16576.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4J9_ECTSI2.890e-15169.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..377
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 401..427
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 378..400
NoneNo IPR availableTMHMMTMhelixcoord: 328..350
NoneNo IPR availableTMHMMTMhelixcoord: 378..400

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig110contigEcto-sp6_S_contig110:180552..186085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig110.1472.1mRNA_Ecto-sp6_S_contig110.1472.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig110 180293..186149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig110.1472.1 ID=prot_Ecto-sp6_S_contig110.1472.1|Name=mRNA_Ecto-sp6_S_contig110.1472.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=428bp
MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAALPAGS
KPAAADASSSARLAAAAASGDNKGAKREGEVVEGYSEAERGSAGTAGGRP
IAEGRVAREETREGGAEGNTEPPLSPPGRGEQGERVASRAAAAAAAMARG
EEGRGEPPERKARRRKEAGDDALEGPPVAAGRVSEGATSAGGDGRGSAAA
IAGDGHAATVAAGGGDEGAGGDADGRTSGPVDSQQAVGAAAQSDGKAGQT
NTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAYADALTATATAAQSQE
SSSQSREESRTQAAVQQQQQQQHATASAATVVGGVGGTVGATIVAAGGTI
PISDDQLPYDGDCAAGDERLMSWRQTPYMAFIECQVAVLVVLVSMILVCW
RRHGRMISVLYAPPADVATPCQGAFTQ*
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