mRNA_Ecto-sp6_S_contig110.1472.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig110.1472.1
Unique NamemRNA_Ecto-sp6_S_contig110.1472.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig110.1472.1 vs. uniprot
Match: A0A6H5JEZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEZ4_9PHAE)

HSP 1 Score: 483 bits (1242), Expect = 1.940e-164
Identity = 336/439 (76.54%), Postives = 346/439 (78.82%), Query Frame = 2
Query:   65 MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAALPAGSKPAAADASXXXXXXXXXASGDNKGAKREGEVVEGYSEAERGSAGTAGGRPIAEGRVAREETREGGAEGNTEPPLSPPGRGEQGERVASRAAAXXXAMA----RGEEGRGEPPERKARRRKEAGDDALEGPPVAAGRVSEGATSAGGDGRGSXXXXXXXXXXXXXXXXXGDEGAGGDADGRTSGPVDSQQAVGAAAQSDGKA-GQTNTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAYADALTATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVV-------GGVGGTVGATIVAAGGTIPISDDQLPYDGDCAAGDERLMSWRQTPYMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ 1345
            MRFKKTSAK GAAATVDG QALDPKLQKRAEQAPASYEL NDDAA PA ++PAA    XXXXXXXXX SGDNK A+REGEVV  YSEA RGS GTAGGRPIAEGRVAREETREGG E NTEPPLSP G  EQ ERVASRA  XXX +A    RGEEGR E  ER ARRRKEAG++ALE P  AAGRVSEGATSAGGDGRGS              XXX       DAD  TSGPVDSQQ+VGAAAQ DG   GQTNT PP  AIPSKPARTLADVAAFVEADSIAAEKAYADAL ATAT             XX  XXXXXXXXXXXXXXXXX           GGVGGTVGATIVAAGGTIP+SDDQL YDGDCAAGDER+MSWRQTP+MAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ
Sbjct:    1 MRFKKTSAKTGAAATVDGEQALDPKLQKRAEQAPASYELTNDDAASPADNEPAAXXXXXXXXXXXXXTSGDNKDAEREGEVVGAYSEAARGSVGTAGGRPIAEGRVAREETREGGVEENTEPPLSPSGSDEQEERVASRAXXXXXXVAGHTARGEEGRSESSERTARRRKEAGNNALEDPRGAAGRVSEGATSAGGDGRGSAASIAGDGHAAAVAXXXXXXXXXXDADVGTSGPVDSQQSVGAAAQIDGHTKGQTNTPPPPPAIPSKPARTLADVAAFVEADSIAAEKAYADALIATATAAQSQETSSQSGEXXRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVGGTVGATIVAAGGTIPVSDDQLLYDGDCAAGDERVMSWRQTPHMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ 439          
BLAST of mRNA_Ecto-sp6_S_contig110.1472.1 vs. uniprot
Match: D7G4J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J9_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 7.800e-151
Identity = 296/428 (69.16%), Postives = 304/428 (71.03%), Query Frame = 2
Query:   65 MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAALPAGSKPAAADASXXXXXXXXXASGDNKGAKREGEVVEGYSEAERGSAGTAGGRPIAEGRVAREETREGGAEGNTEPPLSPPGRGEQGERVASRAAAXXXAMARGEEGRGEPPERKARRRKEAGDDALEGPPVAAGRVSEGATSAGGDGRGSXXXXXXXXXXXXXXXXXGDEGAGGDADGRTSGPVDSQQAVGAAAQSDGKA-GQTNTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAYADALTATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVVGGVGGTVGATIVAAGGTIPISDDQLPYDGDCAAGDERLMSWRQTPYMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ 1345
            MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAA             XXXXXXXXX SGDNKGA+REGEVVEGYSEA+RGSAGTAGGRPIAEGRVAREET+EGGA GNTEPPLSPPG GEQ ERVA RAAA   A+ARGEEGRG                          RVSEGATSAGGDGRGS          XXXXXXX DEGAGGDAD RTSGPVDSQQ+VGAAAQSDG+A GQTNTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAY DALTATAT                                                              L YDGDCAAGDER+MSWRQTP+MAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ
Sbjct:    1 MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAAXXXXXXXXXXXXXXXXXXXXXXXSGDNKGAEREGEVVEGYSEADRGSAGTAGGRPIAEGRVAREETQEGGAGGNTEPPLSPPGSGEQRERVAPRAAAAA-AVARGEEGRG--------------------------RVSEGATSAGGDGRGSAAAIAGDDHAXXXXXXXSDEGAGGDADVRTSGPVDSQQSVGAAAQSDGQAKGQTNTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAYTDALTATATAAQSQ-----------------------------------------------------ESSSLLYDGDCAAGDERVMSWRQTPHMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPADVATPCQGAFTQ 348          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEZ4_9PHAE1.940e-16476.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4J9_ECTSI7.800e-15169.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig110contigEcto-sp6_S_contig110:180293..186149 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1607
Hectar predicted targeting categoryother localisation
Exons6
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-07_000350.1
Cds size1284
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig110.1472.1prot_Ecto-sp6_S_contig110.1472.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig110 180552..186085 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348801.8840318-UTR-Ecto-sp6_S_contig110:180292..1805511682348801.8840318-UTR-Ecto-sp6_S_contig110:180292..180551Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig110 180293..180551 -
1682348801.9504411-UTR-Ecto-sp6_S_contig110:186085..1861491682348801.9504411-UTR-Ecto-sp6_S_contig110:186085..186149Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig110 186086..186149 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348801.8947756-CDS-Ecto-sp6_S_contig110:180551..1807011682348801.8947756-CDS-Ecto-sp6_S_contig110:180551..180701Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig110 180552..180701 -
1682348801.9042587-CDS-Ecto-sp6_S_contig110:181386..1814571682348801.9042587-CDS-Ecto-sp6_S_contig110:181386..181457Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig110 181387..181457 -
1682348801.9135933-CDS-Ecto-sp6_S_contig110:182076..1822301682348801.9135933-CDS-Ecto-sp6_S_contig110:182076..182230Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig110 182077..182230 -
1682348801.9227242-CDS-Ecto-sp6_S_contig110:182820..1829871682348801.9227242-CDS-Ecto-sp6_S_contig110:182820..182987Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig110 182821..182987 -
1682348801.9320567-CDS-Ecto-sp6_S_contig110:184164..1848451682348801.9320567-CDS-Ecto-sp6_S_contig110:184164..184845Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig110 184165..184845 -
1682348801.9413195-CDS-Ecto-sp6_S_contig110:186024..1860851682348801.9413195-CDS-Ecto-sp6_S_contig110:186024..186085Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig110 186025..186085 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig110.1472.1

>prot_Ecto-sp6_S_contig110.1472.1 ID=prot_Ecto-sp6_S_contig110.1472.1|Name=mRNA_Ecto-sp6_S_contig110.1472.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=428bp
MRFKKTSAKAGAAATVDGNQALDPKLQKRAEQAPASYELNNDDAALPAGS
KPAAADASSSARLAAAAASGDNKGAKREGEVVEGYSEAERGSAGTAGGRP
IAEGRVAREETREGGAEGNTEPPLSPPGRGEQGERVASRAAAAAAAMARG
EEGRGEPPERKARRRKEAGDDALEGPPVAAGRVSEGATSAGGDGRGSAAA
IAGDGHAATVAAGGGDEGAGGDADGRTSGPVDSQQAVGAAAQSDGKAGQT
NTAPPAAAIPSKPARTLADVAAFVEADSIAAEKAYADALTATATAAQSQE
SSSQSREESRTQAAVQQQQQQQHATASAATVVGGVGGTVGATIVAAGGTI
PISDDQLPYDGDCAAGDERLMSWRQTPYMAFIECQVAVLVVLVSMILVCW
RRHGRMISVLYAPPADVATPCQGAFTQ*
back to top

mRNA from alignment at Ecto-sp6_S_contig110:180293..186149-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig110.1472.1 ID=mRNA_Ecto-sp6_S_contig110.1472.1|Name=mRNA_Ecto-sp6_S_contig110.1472.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5857bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:180293..186149- (Ectocarpus species6 EcLAC_371)
ACTGCGACATGGACATGACACGATAGTACACACACTGGAGCATTGACGGC ACACACGCAAGGGTATGAGGTTCAAAAAGACCAGTGCGAAGGCTGGGGCA GCAGCAACGGTGGATGGAAACCAAGGTGTGCGAATGTTCACATCATCTTG TTGCAGACGGTAACATGACGCCTAATAGCACCCCCCCTTCGCCCAGGCAC ACCATTGACTACTGCTGTACGACATGCATAAATCCTTTCTCGGTTGCAGA GTCCGGGGTGTGTGCTGGTCGGACAAAATCTAGAGTAGATGATCAGGACG CTCTTGAACTCGATTTGGACTTGGGGCTCGAATTACTGATTACAATGATG CCTACAAACTCATGATGTAATTTTGGTTCCCAGTAGCAGTAGTTCCCAAC AATGTTGCCGCAAGCCTACATACAAGTTAGTGAGCGCCAGGAGCGGTGGT TGGTGCTCCTACTGCTGTAGTACACATCACGCACACCAGACAGCTAGTCG AGAGGTGGTTCGCAGCGTAGATGATGCAGCGGCCAAGAATCCAAAACCGG GCATGATAGACATCATATCATGTGTAGCTTGCTGTTTAAGCGGTGTTGGT TGTGTTTTCTCGTCCCCCTTCGATTTGAGTTGCCGTTGTGTTTAGCCGCC GGTGGTGCGTACATATCTCCGTCTCACGAGCGGTAGAAAAGGAGTGTCCT ACCCTTGCCCTGTGCGTATGTTATAAATACTGCCGACTCTCCTCACTGGG TCGCCTGACAGTTTGTGAAACATAAAGAGCATACATGGTACATACTTTCA TCATGAAGCCGTGGTGCTCGCAGTAAGGTCGACGCATGTGTGGCCATGTT TGCCGAAGCGGTGCTGCTGCCGTTTTATAACCCTAACCCTTCTCGGCGGT GGGTATCTGTATCTATGTGTGTGCACAAGCAACGCTTATTTTTGTTGCAA GTGGCTCAGCGCTACTGCTGTTGATTTTTTGTGTGTTGTTTGTGGTGGGG TTGGAAAGCGTATCCCGTAGGAGTTAAATAGTGGTGCGCCCAAACCGTCA ACTCTTACTTTGCGAAGACATTCCCCAGAGATCTTCTTTCTCTGCCCACA CTATGTTCAACGTGCAGACGTTACGAATCCCAACAACAGCTTGTTGTCAG CAGTAGTTTTGTCACTTTCAAAAGAAGCGTCAATACTGGTGTTGACACTA GTGTTCCTTCCACGCCTCCAATGTATCTACGAGCACATGTTCGCACAACG CGCAGTACGTGCCCACACGACCCCACACACCGCCGCCACTGCCGGTGTCG ACAGCGCTGGACCCTAAGCTGCAGAAGAGGGCGGAACAGGCCCCCGCTTC CTACGAACTAAACAACGACGATGCAGCATTGCCAGCAGGTAGCAAACCTG CCGCCGCAGACGCATCCTCCTCCGCACGGCTTGCAGCAGCAGCGGCAAGT GGCGATAATAAGGGCGCCAAGCGAGAAGGGGAGGTTGTGGAGGGGTACTC AGAGGCGGAAAGAGGAAGTGCCGGGACCGCTGGCGGTCGACCAATCGCAG AGGGCAGGGTAGCAAGGGAAGAAACGCGAGAGGGAGGAGCGGAGGGTAAC ACGGAGCCCCCGCTGTCGCCCCCCGGAAGGGGTGAACAAGGAGAACGAGT TGCATCTCGAGCGGCGGCGGCGGCGGCGGCGATGGCGAGGGGGGAGGAGG GTCGAGGTGAGCCTCCAGAACGCAAGGCCAGAAGAAGAAAAGAAGCGGGC GATGATGCTCTGGAGGGCCCTCCAGTTGCCGCAGGCAGAGTTTCGGAAGG GGCGACCTCTGCCGGTGGGGATGGACGAGGTTCGGCGGCTGCGATCGCGG GAGACGGCCATGCTGCTACCGTTGCCGCCGGTGGCGGTGATGAAGGGGCC GGCGGCGATGCTGACGGCAGGACTAGCGGCCCCGTGGACTCGCAGCAAGC GGTCGGAGCAGCGGCGCAGAGTGACGGTAAAGCAGGTACAGTAAGGCTTG TCCCTCGTCTTCCTTTTCTCTTGGTGAGGGGAGGGGAGGGGAAACGCGGC GAACGAAGTTTTTCCCGCGGGTACCTGGCGATTTATTACTTTGCCCCGCT GTATTCGTATCCGCCTTTGTTGTTTTCTCAGAAGAATACAACGAACAATG AAATCACCACCCTTTCTTTTGCTATCCGCCTCTTTTCCCTTCTGTCGTTT GATACCTTCTCGTTCTTCTCGTTGAAGCCCTACCGGTATATCCTCCGACA CATTTTGTCTTACTTTATGTGTGGTGTTGGCAGTAGTGTGCCCCTTCCCT TATCATCCGCCGTCGCCTTGCTTTTTTTGCTACATAGAATTTAGTATCGA ATTCAAAAACTTGACGCAACCAAAAGAAGAACAATGAGATCCGATTTCAG ACACGTTCCGTCTCTAAAGATAAGCGACGAGAACGTTGCTGCGCGTTGAG AGCACCGTTTGTACCGGTGTGTCGCAGATGGCATACGACGTGGGCCGAAT CATTTCACCTAGAAACGTAAAAGTTGAAGATGGTATTGGTGGAAATTAAC AGACGACAAACCAGCACCCGCGCCAACAAACCCACAAACACTTCCCTCGT ATGACTCGGGAAAAACGTTGGTTCCGCCTGGGAAGAACCGGAAGCTTTCA GAGGCTATTGCAGTGGCGTCTTGTTTCGCCAGCCGTTGCTTGCGCCTGGC ATTTGGTATTTTGTCCTCAACGACTTTTCTTTTGCTGCGTCGAAGCCGGT ACTAGTTTGTCGTGGACATGCATTCGGCGATGCCCCCTCTAGCTTCAGTG GGCGTGAATGCTTCAGCCACTTAGCAGCAGCATGATATTCTGCACAGCAG CGACATGAACAACCCGGGCCGATGCAAGCTACGAAAATGACAGCATTTCT CGTTGGTGTTGTCGTGTTGTCATTGCTATGGGAGGAATGCATTTTCCTTT CATTATCTTTGCTGCTACCCCATTGTAGTGCAGCTACCCTGCTTTTTTCA CTTACGGCTTCTGCTGCTGTACTGCTGCTGCTGCTGTCGCTGCTGCTACC CTCCTATTTCACCTAAGGTTTCTGCTACTGCTGCTGCTATCCTGATCTGT TTCCCCTGCTACTGCTACTGCTGATATTGATGGTGTTGTCGCTGTTACCA CTGGTCTTGCAGGACAAACCAACACGGCTCCGCCGGCGGCGGCAATACCG TCCAAGCCCGCAAGGACACTGGCAGACGTGGCCGCATTTGTGGAGGCAGA CAGCATCGCGGCGGAGAAGGCCTACGCCGATGCTCTCACCGCCACTGCCA CCGCAGCACAAAGTCAAGAATCCAGCTCGGTGAGAAACAGCAGAGAGGAA CTGCGGGGGGGGCGTTGTGGCAATCGAGGGAAGATGGGAGGGGGAGAGGG GGGGGTCAAGACGCTCACCCAGGCAAGGGCTGAGGTGAACCGAGGCGTAT TTACCCCCACTCGAGCTGACAATGTCCTTTCTTTCGCATCTAGGAAATAG AGACGGACATGTTGAGGGGGGGGTGACGGAGGAAGAGAAGTAGGAGGACG GTGCGTGAGTGTAATTTTAGAGAATCGAGGATTTGAGAACGTCCTATCCG GGGTTGAAAGCGTGCTAACGTCTTGGCATGCCTACGTACCCCCACTGACA ATGAAACGATTCCGGCTCACCTTTGTCCTCAGTCCTCAGTCCTAGCGCTA TTCCAAGCAAGCTCCGCCAACACTGCAGTCAACAGGCTGATGATGAAACA CTCTCTCCGCTATCGAAGAAATGGCAAAGTCTTGCCGGTGGATCGAAGAT TGATTCGGTGTCTCTTTGAAAGAAAATTAAATACGTCCTACTCAAGTGTG ATATGTATGCACCACGGAACAGCTATTGTCTGTCCCTTTTTTCAATTGCC CTCGTCGTATTCAACCCAGCAATCCCGAGAGGAATCCCGAACACAAGCGG CAGTGCAGCAGCAGCAGCAACAGCAGCACGCTACGGCATCGGCGGCGACT GTTGTCGGTGGAGTGGGGGGCACCGTGGGTGCGACAATCGTCGCCGCCGG GGGGACTATCCCTATTTCCGATGGTGGGAGCATGCCGTTGTCTTTTGCTT GAACCCAAGCCGCATGCGTCTGTTGGGCTGTTGGTTTGTACTTGGAGCGT TGACCTCGCTCAAAGGCCGATGGAGGAAATAGTTCCGGTATCTGCGGGGC AACGAACGAAGTGACCGTTTTTGTCCGCCGGATCTCCCGGGGGGCACGCA AATCGGAGGAAGTCTGAAATGATGTGTGTATGGGTGTTTGTTCAGTTTTG GCATCGACCGCTCTAACCATCTGACCAATGAAAACATACCCCGGTGTCGG TGTCGGTGCGGCTACAAACGTAAAACGCTTTTAAAGAAGTGTGCGTGTGC GTGCCTCGTGATTATTGGCATCGATCGCGCCAACCGGGTGACCTACGCGA TTACGTCAATCTCAGTACGGCTAAAAGCGGGGAACGCTTCTAATGGCCAT GCCCTGGGGCCCCGTGAGGGGATATCACGGGGAAGGGTAGGTCATTCTCC GGATTGAATACTTGTACGGGAACGGCAGTGCTGTAGAACGTATGAATATT TTCGTACAGTAGTGTAGCATCGACCAAGCAGTGTGTGTCTGTGTGTGTGT GTTGCTTGCTAATTGTTGCCGTGTGTCGTGCGCCATGAACAGACCAGCTG CCGTACGACGGGGACTGCGCCGCAGGAGACGAGAGGCTGATGTCATGGAG GCAGACCCCCTATGTGAGAGAGAGATTCGCCGGGGCCCCCGCTGTTGTGT TTGTTGTTGTTGCCTTTGAATTCAAAATAATTCCGATATCAGGGCAGTAC CTTCTTGCATCCATACTGGTTCCATCTGACGCGGGAGCATTCGGCGGTGA CAGTCTAACTGCTAACCCCCCAAAAAAGTGTTGTTTCATCCTGTGTAGTT GGTCGTGTCGCTAACCCTACTACTACTAGTAATCCTATGGTACGTGGTAT GGTACCTTTTCGGTTCGAATCTCTCTCGGGAGTGAACTGTTTGCTATTCT GTGTTCGAAAGCACCAAAGAAGGGACTGGGCAAATCCTTTCTAGTGTTAA TAGCACCGCAAGCGTATGATAGGACGATACGAAAAAGGTCCCTTCTGCTA CAACCTCCACCCACCCTGTTTGCCCCCAAGTGACATGCGTGCATACGTCA ATAAAATTCCGAACGGTGTCGGCAGAGACTGGTGCCAGAGTAGATGGAAC GAACACACACAGACAGACGGCACGATGACAAGGCAAGACAAATCAAATAG GGCATGAAAATATCCAGGAGAATCAGCAGGCATTGGTGCTGCACACAACC GCTACCAGTGTCAAGAAGGAACACCGCCCCAACACCCTTACGTTCACGGA AGCAAGTATCCCCCCACCCCTTCCACTCTTGCTCTGTTGTGCCTGCAGAT GGCGTTTATTGAGTGCCAGGTGGCCGTGCTGGTGGTGCTCGTGTCGATGA TCCTGGTCTGCTGGCGGCGGCACGGCAGGATGATCTCCGTCCTCTACGCG CCGCCCGCGGACGTGGCCACTCCGTGCCAGGGCGCGTTCACGCAATGAGC TTTTTTTCCCACTTGCTGGCATTTTTCCCCAGTAGCTTTCGGGAGGATTT TAGTGTTGGTTTTAGTATAGGAGTTATAGGGTTAATGTTACGCGCGAGGA CATCAAGCTTGGTTTCGTTAGGTGTTGCGGGTTAGGGTTGGGGTGTTTGG GTACGAAGCCCCCCTCTCTCTGTTTCATAGGTTTGGCGTTAGTATCCTCG CCGAGAAGAAGGTGATCCTAGTCCCCGCTGGCAGTGTGACGACTCGCCTC CTCCCCA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig110:180293..186149-

>mRNA_Ecto-sp6_S_contig110.1472.1 ID=mRNA_Ecto-sp6_S_contig110.1472.1|Name=mRNA_Ecto-sp6_S_contig110.1472.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1284bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:180293..186149- (Ectocarpus species6 EcLAC_371)
ATGAGGTTCAAAAAGACCAGTGCGAAGGCTGGGGCAGCAGCAACGGTGGA
TGGAAACCAAGCGCTGGACCCTAAGCTGCAGAAGAGGGCGGAACAGGCCC
CCGCTTCCTACGAACTAAACAACGACGATGCAGCATTGCCAGCAGGTAGC
AAACCTGCCGCCGCAGACGCATCCTCCTCCGCACGGCTTGCAGCAGCAGC
GGCAAGTGGCGATAATAAGGGCGCCAAGCGAGAAGGGGAGGTTGTGGAGG
GGTACTCAGAGGCGGAAAGAGGAAGTGCCGGGACCGCTGGCGGTCGACCA
ATCGCAGAGGGCAGGGTAGCAAGGGAAGAAACGCGAGAGGGAGGAGCGGA
GGGTAACACGGAGCCCCCGCTGTCGCCCCCCGGAAGGGGTGAACAAGGAG
AACGAGTTGCATCTCGAGCGGCGGCGGCGGCGGCGGCGATGGCGAGGGGG
GAGGAGGGTCGAGGTGAGCCTCCAGAACGCAAGGCCAGAAGAAGAAAAGA
AGCGGGCGATGATGCTCTGGAGGGCCCTCCAGTTGCCGCAGGCAGAGTTT
CGGAAGGGGCGACCTCTGCCGGTGGGGATGGACGAGGTTCGGCGGCTGCG
ATCGCGGGAGACGGCCATGCTGCTACCGTTGCCGCCGGTGGCGGTGATGA
AGGGGCCGGCGGCGATGCTGACGGCAGGACTAGCGGCCCCGTGGACTCGC
AGCAAGCGGTCGGAGCAGCGGCGCAGAGTGACGGTAAAGCAGGACAAACC
AACACGGCTCCGCCGGCGGCGGCAATACCGTCCAAGCCCGCAAGGACACT
GGCAGACGTGGCCGCATTTGTGGAGGCAGACAGCATCGCGGCGGAGAAGG
CCTACGCCGATGCTCTCACCGCCACTGCCACCGCAGCACAAAGTCAAGAA
TCCAGCTCGCAATCCCGAGAGGAATCCCGAACACAAGCGGCAGTGCAGCA
GCAGCAGCAACAGCAGCACGCTACGGCATCGGCGGCGACTGTTGTCGGTG
GAGTGGGGGGCACCGTGGGTGCGACAATCGTCGCCGCCGGGGGGACTATC
CCTATTTCCGATGACCAGCTGCCGTACGACGGGGACTGCGCCGCAGGAGA
CGAGAGGCTGATGTCATGGAGGCAGACCCCCTATATGGCGTTTATTGAGT
GCCAGGTGGCCGTGCTGGTGGTGCTCGTGTCGATGATCCTGGTCTGCTGG
CGGCGGCACGGCAGGATGATCTCCGTCCTCTACGCGCCGCCCGCGGACGT
GGCCACTCCGTGCCAGGGCGCGTTCACGCAATGA
back to top