prot_Ecto-sp6_S_contig110.1459.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig110.1459.1
Unique Nameprot_Ecto-sp6_S_contig110.1459.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length130
Homology
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 5.340e-55
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   27 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116          
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.140e-52
Identity = 84/90 (93.33%), Postives = 88/90 (97.78%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   28 ESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117          
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 166 bits (421), Expect = 5.360e-51
Identity = 81/90 (90.00%), Postives = 89/90 (98.89%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   29 ESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118          
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: A0A8J5MIZ0_9STRA (Histone domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MIZ0_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.150e-50
Identity = 80/90 (88.89%), Postives = 89/90 (98.89%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESYS+YIYKVL+QVHPDTGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   32 ESYSTYIYKVLRQVHPDTGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSA 121          
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 165 bits (418), Expect = 1.580e-50
Identity = 80/90 (88.89%), Postives = 89/90 (98.89%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   31 ESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 120          
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.860e-50
Identity = 84/90 (93.33%), Postives = 88/90 (97.78%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  161 ESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250          
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: M4B6M3_HYAAE (Histone H2B n=49 Tax=Oomycota TaxID=4762 RepID=M4B6M3_HYAAE)

HSP 1 Score: 164 bits (415), Expect = 4.120e-50
Identity = 79/90 (87.78%), Postives = 89/90 (98.89%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESYS+YIYKVL+QVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   28 ESYSTYIYKVLRQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSA 117          
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 164 bits (416), Expect = 4.510e-50
Identity = 80/90 (88.89%), Postives = 89/90 (98.89%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   41 ESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130          
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 164 bits (415), Expect = 4.680e-50
Identity = 80/90 (88.89%), Postives = 88/90 (97.78%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   32 ESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121          
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Match: A0A7S2P1D6_9STRA (Histone H2B n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P1D6_9STRA)

HSP 1 Score: 165 bits (417), Expect = 6.350e-50
Identity = 80/90 (88.89%), Postives = 88/90 (97.78%), Query Frame = 0
Query:   40 ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 129
            ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   64 ESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 153          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI8_ECTSI5.340e-55100.00Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A836CJ22_9STRA3.140e-5293.33Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A485K2U0_9STRA5.360e-5190.00Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep... [more]
A0A8J5MIZ0_9STRA1.150e-5088.89Histone domain-containing protein n=1 Tax=Phytopht... [more]
B8BX20_THAPS1.580e-5088.89Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A836CJT3_9STRA1.860e-5093.33Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R... [more]
M4B6M3_HYAAE4.120e-5087.78Histone H2B n=49 Tax=Oomycota TaxID=4762 RepID=M4B... [more]
A0A6U0X3U9_9STRA4.510e-5088.89Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R... [more]
A0A6U6DWX5_9STRA4.680e-5088.89Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ... [more]
A0A7S2P1D6_9STRA6.350e-5088.89Histone H2B n=2 Tax=Skeletonema marinoi TaxID=2675... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 100..113
score: 90.61
coord: 113..126
score: 92.65
coord: 42..60
score: 84.56
coord: 83..100
score: 56.83
coord: 61..81
score: 67.66
IPR000558Histone H2BSMARTSM00427h2b3coord: 32..128
e-value: 1.1E-69
score: 247.5
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 16..129
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 97..119
IPR009072Histone-foldGENE3D1.10.20.10coord: 8..129
e-value: 3.2E-57
score: 194.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 16..129
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 13..105
e-value: 2.2E-18
score: 66.9
NoneNo IPR availablePANTHERPTHR23428:SF196HISTONE H2B TYPE 1-Ncoord: 16..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig110contigEcto-sp6_S_contig110:68087..68476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig110.1459.1mRNA_Ecto-sp6_S_contig110.1459.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig110 68087..68476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig110.1459.1 ID=prot_Ecto-sp6_S_contig110.1459.1|Name=mRNA_Ecto-sp6_S_contig110.1459.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=130bp
PLVPLSHNTFINTMAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVL
KQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQ
TAVRLMLPGELAKHAVSEGTKAVTKFTSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3