prot_Ecto-sp6_S_contig11.1259.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig11.1259.1
Unique Nameprot_Ecto-sp6_S_contig11.1259.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length149
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: D8LAV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAV8_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 9.010e-102
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0
Query:    1 MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
            MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDM+AFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF
Sbjct:    1 MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148          
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A5D6Y004_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y004_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.370e-33
Identity = 62/114 (54.39%), Postives = 77/114 (67.54%), Query Frame = 0
Query:   36 VDLESLQLAYPPRTTPEFVLKNGWCPPP-ESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
            V+LE   L Y P   PE V  NGW PPP E  P LPF V RT  G  +PVYRDI+NGRTR +TI+++  GD E   ++LSKVC G +V AR G L + GDHA ++K+WL+GLGF
Sbjct:   42 VELEVPPLKYEPTYEPERVSFNGWSPPPAEPLPGLPFHVKRTAVGLQLPVYRDIRNGRTRVLTILRRYHGDEEELRTELSKVCLGKEVVARPGRLEVVGDHARDIKKWLTGLGF 155          
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: D0NCG0_PHYIT (Uncharacterized protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=D0NCG0_PHYIT)

HSP 1 Score: 112 bits (281), Expect = 5.570e-29
Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 0
Query:   43 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
            L Y P   PE V  NGW P PE+    LPF V RT  G  +PVYRD +NGRTR +TI+++  GD +    ++SKVCQG +V  R G L + GDHA+++++WL GLGF
Sbjct:   48 LKYEPTYVPEKVSFNGWSPAPEAPLSGLPFHVKRTATGMQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 154          
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A6A3EWI4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EWI4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.880e-29
Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 0
Query:   43 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
            L + P   PE V  NGW P PE+  P LPF V RT  G  +PVYRD +NGRTR +TI+++  GD      ++SKVCQG +V  R G L + GDHA+++++WL GLGF
Sbjct:   48 LKFEPSYVPEKVSFNGWSPAPEAPLPGLPFHVKRTAVGMQLPVYRDFRNGRTRVLTILRRYKGDELELRDEMSKVCQGKEVVVRPGRLEVVGDHASDIRKWLVGLGF 154          
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A0W8C9Q0_PHYNI (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9Q0_PHYNI)

HSP 1 Score: 115 bits (287), Expect = 1.400e-28
Identity = 54/107 (50.47%), Postives = 71/107 (66.36%), Query Frame = 0
Query:   43 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
            L Y P   PE V  NGW P PE+  P LPF V RT  G  +PVYRD +NGRTR +TI+++  GD +    ++SKVCQG +V  R G L + GDHA+++++WL GLGF
Sbjct:  168 LKYEPTYVPEKVSFNGWSPAPEAPLPGLPFHVKRTAVGLQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 274          
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A8K1FRY2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRY2_PYTOL)

HSP 1 Score: 111 bits (277), Expect = 2.230e-28
Identity = 55/113 (48.67%), Postives = 71/113 (62.83%), Query Frame = 0
Query:   37 DLESLQLAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
            ++E   L Y P   PE V  NGW P PE   P+LPF V RT  G  +PVYRD +NGRTR +TI+++  GD     +++SK+C G  V  R G L + GDHA+ VK+WL GLGF
Sbjct:   42 EVEVPPLKYEPTYVPEKVSFNGWSPAPEQPLPNLPFFVKRTAVGLQLPVYRDYRNGRTRVLTILRRFNGDEGELQAEMSKICGGKDVVLRPGRLEVTGDHASEVKKWLVGLGF 154          
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: W7U6S8_9STRA (Ribosomal protein L49/IMG2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6S8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 9.460e-27
Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 0
Query:   43 LAYPPRTTPEFVLKNGWCPPPES------KPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGG-ELRIEGDHATNVKRWLSGLGF 148
            L YPP   P  VL NGW  PP+       K  LPFQV RT KG ++PVY D++ GRT+ +T+V+K +GD+E    ++SKVC   +V  R G  L ++G +   +++WL+GLGF
Sbjct:   52 LKYPPTYQPSRVLPNGWSAPPDPATVGLPKTSLPFQVERTDKGRWLPVYTDVRKGRTQLITLVRKVSGDLEEMRGEMSKVCANQEVRIRTGPRLEVKGRYTAQLRQWLAGLGF 164          
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A484E697_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E697_BRELC)

HSP 1 Score: 107 bits (266), Expect = 1.020e-26
Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 0
Query:   43 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
            L Y P   PE V  NGW P PE+    LPF V RT  G  +PVYRD +NGRTR +TI+++  GD      ++SK+C+G +V  R G + + GDH ++V++WL GLGF
Sbjct:   48 LKYEPTYVPEKVSFNGWSPAPEAPLTGLPFHVKRTATGLQLPVYRDYRNGRTRVLTILRRYRGDEHELRDEMSKICEGKEVVIRPGRMEVVGDHFSDVRKWLVGLGF 154          
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A7S3XRT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRT8_HETAK)

HSP 1 Score: 103 bits (256), Expect = 4.280e-25
Identity = 57/143 (39.86%), Postives = 77/143 (53.85%), Query Frame = 0
Query:   24 RNEARRILESGPVDLESLQLAYPPRTTPEFV-----------------LKNGWCPPPESKPD-LPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
            RN+ +R+ +  PV L      +  +  PE V                 L NGW PPP + PD  PF V RT KG ++PVY DI+NGRT+T TIV++  GD E    DLS +  G +  AR G + + G+H   V+ WL+GLGF
Sbjct:   23 RNQVKRLFKKNPVALRHRTKYFGKQVPPEKVAEIPTELQFKPSQEPKALPNGWTPPPATVPDGYPFTVTRTLKGKWLPVYTDIRNGRTKTFTIVRRIEGDPEPLRRDLSALT-GARAVARAGRVEVPGNHVPRVRAWLAGLGF 164          
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Match: A0A5A8CPU9_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPU9_CAFRO)

HSP 1 Score: 97.4 bits (241), Expect = 2.690e-23
Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 0
Query:   57 NGWCPPPESKPD-LPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
            +GW P   + P+ LPF V R G  G +PVYRDI++GRT+  T+V+K  GD EA   +L K+C+G  V  R G + ++GDH  +V R+LSGLG 
Sbjct:   33 HGWAPATGAVPETLPFAVDRAGPAGSLPVYRDIRHGRTKIYTVVRKIRGDTEAMAQELHKLCRGAPVTQRPGRIEVDGDHKLDVVRYLSGLGL 125          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAV8_ECTSI9.010e-10299.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5D6Y004_9STRA2.370e-3354.39Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
D0NCG0_PHYIT5.570e-2949.53Uncharacterized protein n=8 Tax=Peronosporaceae Ta... [more]
A0A6A3EWI4_9STRA7.880e-2949.53Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A0W8C9Q0_PHYNI1.400e-2850.47Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A8K1FRY2_PYTOL2.230e-2848.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W7U6S8_9STRA9.460e-2744.25Ribosomal protein L49/IMG2 n=2 Tax=Monodopsidaceae... [more]
A0A484E697_BRELC1.020e-2646.73Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S3XRT8_HETAK4.280e-2539.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5A8CPU9_CAFRO2.690e-2347.31Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007740Ribosomal protein L49/IMG2PFAMPF05046Img2coord: 69..148
e-value: 2.1E-21
score: 76.0
IPR007740Ribosomal protein L49/IMG2PANTHERPTHR13477MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49coord: 18..148
NoneNo IPR availableGENE3D3.30.780.10coord: 36..148
e-value: 3.6E-22
score: 80.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig11contigEcto-sp6_S_contig11:850629..853230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig11.1259.1mRNA_Ecto-sp6_S_contig11.1259.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig11 850629..853230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig11.1259.1 ID=prot_Ecto-sp6_S_contig11.1259.1|Name=mRNA_Ecto-sp6_S_contig11.1259.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=149bp
MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTT
PEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVK
KATGDMEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007740Ribosomal_L49/IMG2