prot_Ecto-sp6_S_contig109.1176.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig109.1176.1
Unique Nameprot_Ecto-sp6_S_contig109.1176.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length203
Homology
BLAST of mRNA_Ecto-sp6_S_contig109.1176.1 vs. uniprot
Match: D8LET1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET1_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 3.990e-94
Identity = 132/148 (89.19%), Postives = 134/148 (90.54%), Query Frame = 0
Query:   59 GSPEQVPADRELQYLCPSTGCNTNLFLKENIHKDRADYCTPPAGTLAPVPAR------GPVCWLCASEFEVGEVVWAYNIPDVERPACYINWCLNEDACIILKKEGVPVNVRLAGEDDVAKRCSDCKRVDPTILDTDQLIAKSTQPCH 200
            GSPEQVPADRELQ+LCP TGCNTNLFLKENIHKDRADYCT PAGTLAPVPAR      G VCWLCASEFEVGEVVWAY  PDVERPACYINWCLNEDACIILK+EG PVNVRLAGEDDVAKRCSDCKR D TILDTDQLIAKSTQPCH
Sbjct:   53 GSPEQVPADRELQHLCPGTGCNTNLFLKENIHKDRADYCTTPAGTLAPVPARLLIKYPGKVCWLCASEFEVGEVVWAYTTPDVERPACYINWCLNEDACIILKEEGAPVNVRLAGEDDVAKRCSDCKRADSTILDTDQLIAKSTQPCH 200          
BLAST of mRNA_Ecto-sp6_S_contig109.1176.1 vs. uniprot
Match: A0A6H5KCU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU2_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 1.930e-74
Identity = 118/153 (77.12%), Postives = 124/153 (81.05%), Query Frame = 0
Query:   60 SPEQVPADRELQYLCPSTGCNTNLFLKENIHKDRADY--CTP-PAGTLA----PVPARGPVCWLCASEFEVGEVVWAYNIPDVERPACYINWCLNEDACIILKKEGVPVNVRLAGEDD---VAKRCSDCKRVDPTILDTDQLIAKSTQPCHFG 202
            SPEQVPADRELQYLCP TGCNTNLFLKENI KDRADY  C    AGT A     +   G VCWLCASEFEVGEVVWA+ IPDVERPAC+INWCLN +ACI+LK +GVPVNVRLAGEDD   V KRC DCKR DPTILDTDQLIAKSTQP H G
Sbjct:   52 SPEQVPADRELQYLCPRTGCNTNLFLKENIRKDRADYPACRNFNAGTCAWTGLLIKYPGKVCWLCASEFEVGEVVWAHTIPDVERPACHINWCLNAEACIVLKGDGVPVNVRLAGEDDANCVGKRCRDCKRADPTILDTDQLIAKSTQPFHVG 204          
BLAST of mRNA_Ecto-sp6_S_contig109.1176.1 vs. uniprot
Match: D8LKW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW7_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 2.330e-43
Identity = 82/121 (67.77%), Postives = 84/121 (69.42%), Query Frame = 0
Query:   63 QVPADRELQYLCPSTGCNTNLFLKENIHKDRADYCTPPA------------GTLAPVPARGPVCWLCASEFEVGEVVWAYNIPDVERPACYINWCLNEDACIILKKEGVPVNVRLAGEDDV 171
            +  ADRE QYLCP TGCNTNL      HKDRADY   PA            G L   P  G VCWLCASEFEVGEVVWAY IPDVERPACYI WCLN DA IILK+EGVPVN RLAGEDDV
Sbjct:   99 RAKADREPQYLCPGTGCNTNL------HKDRADY---PACRTFSVGTCVWTGLLIKYP--GNVCWLCASEFEVGEVVWAYTIPDVERPACYITWCLNGDAGIILKEEGVPVNARLAGEDDV 208          
BLAST of mRNA_Ecto-sp6_S_contig109.1176.1 vs. uniprot
Match: D7FWQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ2_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.830e-19
Identity = 43/54 (79.63%), Postives = 43/54 (79.63%), Query Frame = 0
Query:   59 GSPEQVPADRELQYLCPSTGCNTNLFLKENIHKDRADYCTPPAGTLAPVPARGP 112
            GS EQVPADRE QYLCP TGCNTNLFLKENIHK RADY  P   TLAP PAR P
Sbjct:   83 GSAEQVPADRESQYLCPGTGCNTNLFLKENIHKGRADY--PACRTLAPAPARAP 134          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig109.1176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LET1_ECTSI3.990e-9489.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCU2_9PHAE1.930e-7477.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKW7_ECTSI2.330e-4367.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWQ2_ECTSI1.830e-1979.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig109contigEcto-sp6_S_contig109:493219..495000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig109.1176.1mRNA_Ecto-sp6_S_contig109.1176.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig109 493150..495000 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig109.1176.1 ID=prot_Ecto-sp6_S_contig109.1176.1|Name=mRNA_Ecto-sp6_S_contig109.1176.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=203bp
CLAKAAKPPAPLPTHRSSSTAGSSPPAASPAASTPPPASGAGSSTSAGST
AAAAAAAAGSPEQVPADRELQYLCPSTGCNTNLFLKENIHKDRADYCTPP
AGTLAPVPARGPVCWLCASEFEVGEVVWAYNIPDVERPACYINWCLNEDA
CIILKKEGVPVNVRLAGEDDVAKRCSDCKRVDPTILDTDQLIAKSTQPCH
FG*
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