prot_Ecto-sp6_S_contig109.1171.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig109.1171.1
Unique Name	prot_Ecto-sp6_S_contig109.1171.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	266

Homology

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BLAST of mRNA_Ecto-sp6_S_contig109.1171.1 vs. uniprot
Match: D7G0S0_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S0_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 8.270e-60
Identity = 187/238 (78.57%), Postives = 188/238 (78.99%), Query Frame = 0

Query:   28 GGVTRFSRSKXXXXXXXXXXXXXXXQADEPNVDDDVEADLSSVRNVSAGSDPSARASKIVVSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSRRTSGTFGEITPSRPAAASGFGSXXXXXXXXXXXXXXXXXREITITSAMTPAEAMAHVMVVLGGAAAGPIFIYMLQKHMEEHVIERCVKVALTVRSLVIAVVEYNVVLMLLKY 265
            GGVTRFSRSKXXXXXXXXXXXXXXX  +EPNVDDDVEADLSSVRNVSAGSDPSARASK V                                         XXXXXXXXXXXXXXXXXXXXX TSRRTSGTFGEITPSRPAAASGFG XXXXXXXXXXXXXXXX REITITSAMTPAEAMA VMVVLGGAAAGPIFIYMLQKHMEEHV ER VKVALTVRSLVIAVVEYNVVLMLLKY
Sbjct:   19 GGVTRFSRSKXXXXXXXXXXXXXXXXXEEPNVDDDVEADLSSVRNVSAGSDPSARASKSV------GRQSTGAAPQGSSSQTVPAPSTRRKSAPPVTGAGSXXXXXXXXXXXXXXXXXXXXXXTSRRTSGTFGEITPSRPAAASGFGXXXXXXXXXXXXXXXXXDREITITSAMTPAEAMARVMVVLGGAAAGPIFIYMLQKHMEEHV-ERFVKVALTVRSLVIAVVEYNVVLMLLKY 249

[Close]

BLAST of mRNA_Ecto-sp6_S_contig109.1171.1 vs. uniprot
Match: D7FJ81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ81_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.400e-31
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0

Query:    1 MASRGSGSSTRRAIPDAIEAGWIARTGGGVTRFSRSKXXXXXXXXXXXXXXXQADEPNVDDDVEADLSSVRNVSAGSDPSARASKIVVSGG 91
            MASRGSGSSTRRA P+AIEAGWIARTGGGVTRFSRSKXXXXXXXXXXXXXXXQA+EP VDDDVEADLSSVRNVSAGSDPSARASK VVSGG
Sbjct:    1 MASRGSGSSTRRATPNAIEAGWIARTGGGVTRFSRSKXXXXXXXXXXXXXXXQAEEPFVDDDVEADLSSVRNVSAGSDPSARASKSVVSGG 91

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig109.1171.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig109.1171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G0S0_ECTSI	8.270e-60	78.57	Uncharacterized protein n=3 Tax=Ectocarpus silicul...	[more]
D7FJ81_ECTSI	1.400e-31	94.51	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 264..265
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 206..227
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..205
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 239..263
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 228..238
None	No IPR available	TMHMM	TMhelix		coord: 205..227
None	No IPR available	TMHMM	TMhelix		coord: 240..262

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig109	contig	Ecto-sp6_S_contig109:155369..157990 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig109.1171.1	mRNA_Ecto-sp6_S_contig109.1171.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig109 155369..157990 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig109.1171.1 ID=prot_Ecto-sp6_S_contig109.1171.1|Name=mRNA_Ecto-sp6_S_contig109.1171.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=266bp
MASRGSGSSTRRAIPDAIEAGWIARTGGGVTRFSRSKSKGKGKKHASPPP
QAQADEPNVDDDVEADLSSVRNVSAGSDPSARASKIVVSGGGAGRQSTGA
APQGSSSQPVPAPSTRRQSAPPVTGAGSGSGGGSSSAAPAASSAATSSQS
TSRRTSGTFGEITPSRPAAASGFGSGAAPVAADAASGSGSSAREITITSA
MTPAEAMAHVMVVLGGAAAGPIFIYMLQKHMEEHVIERCVKVALTVRSLV
IAVVEYNVVLMLLKY*