prot_Ecto-sp6_S_contig108.1133.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig108.1133.1
Unique Nameprot_Ecto-sp6_S_contig108.1133.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length352
Homology
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BLAST of mRNA_Ecto-sp6_S_contig108.1133.1 vs. uniprot
Match: A0A6H5K8D7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D7_9PHAE)

HSP 1 Score: 491 bits (1263), Expect = 5.290e-172
Identity = 303/352 (86.08%), Postives = 318/352 (90.34%), Query Frame = 0 
Query:    1 MVLLRCVKPVLGLVVLLLLCCNGSAKKSKRWSYPRPQWPVPGHRMDAEPCRLFVWNVASAARFCECTRHLDSVADQTLWEDSHGQLWLRVRFSSPLLRLFPCQQHSLTRCAKCGHDYRAHVEHTLKRHKDGNYDKFIREHARRVGGRGAQDYRGGSVFSDQKRTSRERVDASVGSLGSLSGNGNKSGASNANGGISSGGIGNGAGWRRRLAVLAEAQRAALLQTSGIAVTSETARSAFKAVHDEKVKAEAAQEKRXXXXXXXXXXXXXXXXXXXXSSR-VREDLDAERYGDGGERLRSRGGVADXXXXXXXXXXXXXXXXXXXXXXXSRRKGETEDEVALRHLRAFDRIEYI 351
            MV LRC +PV+GL+V+LLLCCNGSAKKSKRW+YPRPQWPVPGHRMDA PCR F+W+VASAARFCECTRHL+SVADQTLWEDSHGQLWLRV FSSPLLRLFPCQQHSLTRCAKCGH+YRAHVEHTLKR KDG+YDKFIR+HARRVGGRGAQDYRGGSVFSDQKRTSRERVDASVGSLGS SGNGN S           GGIGNG+GWRRRLAVLAEAQRAALLQTSGIAVTSETARSAFKAVHDEKVKA AAQEKRXXXXXXXXXXXXXXXXXX  +SR VREDLDAERYGDGG       G++D  XXXXXXXXXXXXXXXXXXXXX  RKGETEDEVALRHLRAFDRIEYI
Sbjct:    1 MVRLRCFQPVVGLIVILLLCCNGSAKKSKRWTYPRPQWPVPGHRMDAVPCRWFLWDVASAARFCECTRHLESVADQTLWEDSHGQLWLRVPFSSPLLRLFPCQQHSLTRCAKCGHEYRAHVEHTLKRRKDGDYDKFIRDHARRVGGRGAQDYRGGSVFSDQKRTSRERVDASVGSLGSSSGNGNNSXXXXXXXXXXXGGIGNGSGWRRRLAVLAEAQRAALLQTSGIAVTSETARSAFKAVHDEKVKAGAAQEKRXXXXXXXXXXXXXXXXXXRTTSRRVREDLDAERYGDGG-------GLSDRGXXXXXXXXXXXXXXXXXXXXXXXRKGETEDEVALRHLRAFDRIEYI 345
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig108.1133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8D7_9PHAE5.290e-17286.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 241..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..351
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.861

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig108contigEcto-sp6_S_contig108:137468..142087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig108.1133.1mRNA_Ecto-sp6_S_contig108.1133.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig108 137468..142149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig108.1133.1 ID=prot_Ecto-sp6_S_contig108.1133.1|Name=mRNA_Ecto-sp6_S_contig108.1133.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=352bp
MVLLRCVKPVLGLVVLLLLCCNGSAKKSKRWSYPRPQWPVPGHRMDAEPC
RLFVWNVASAARFCECTRHLDSVADQTLWEDSHGQLWLRVRFSSPLLRLF
PCQQHSLTRCAKCGHDYRAHVEHTLKRHKDGNYDKFIREHARRVGGRGAQ
DYRGGSVFSDQKRTSRERVDASVGSLGSLSGNGNKSGASNANGGISSGGI
GNGAGWRRRLAVLAEAQRAALLQTSGIAVTSETARSAFKAVHDEKVKAEA
AQEKRENKRRRRGDGGGATARRRTSSSRVREDLDAERYGDGGERLRSRGG
VADRGGRARRGGSRGSRGSGGGRGSSSRRKGETEDEVALRHLRAFDRIEY
I*
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