prot_Ecto-sp6_S_contig108.1130.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig108.1130.1
Unique Nameprot_Ecto-sp6_S_contig108.1130.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length278
Homology
BLAST of mRNA_Ecto-sp6_S_contig108.1130.1 vs. uniprot
Match: A0A6H5K8D8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D8_9PHAE)

HSP 1 Score: 509 bits (1311), Expect = 1.060e-181
Identity = 260/277 (93.86%), Postives = 267/277 (96.39%), Query Frame = 0
Query:    1 MESAERYLPRPSRPPSLPRATTRRPIKRQRRRIALLAEFAAAPPSFLLQVVVVASAISSALAQLSSDAELSVGSVQDALTCNVTLYDQWYDSPYSGALLEDLVDFWIFPDAELTNGQALEVVSSTCRVMMDTLRLDRAGRNGPVQDKYIYDVMCANECTLSDSIREEAMELSSCTCLELSTQPSNPIYHTEGDWCVENSGRMLCETFGQCGAWNCRISDFMCPRYEYNKQTVPHRGKGDCSGAKRAGGRGSREYATTVIPPLSVAVFVAAAVSRIGL 277
            MESAERYLPRPSR  SLPRATTRRP+KRQRRRI LLAE AAAP SFLLQV+ VASA+SSALAQ SSDAEL+VGSVQDALTCNVTLYDQWYDSPYSGALLEDLVDFWIFPDAELTNGQALEVVSSTCRVMMDTLRLDRAGRNGPVQDKYIYDVMCANECTLSDSIREEAMELSSCTCLELSTQPSNPIYHTEGDWCVENSGRMLCETFGQCG WNCRISDFMCPRYEYNKQTVPHRGKGDCSGA +AGGRGSR+YATTVIPPLSVAVFVAAA SR+GL
Sbjct:    1 MESAERYLPRPSR--SLPRATTRRPLKRQRRRIGLLAESAAAP-SFLLQVLFVASAMSSALAQPSSDAELNVGSVQDALTCNVTLYDQWYDSPYSGALLEDLVDFWIFPDAELTNGQALEVVSSTCRVMMDTLRLDRAGRNGPVQDKYIYDVMCANECTLSDSIREEAMELSSCTCLELSTQPSNPIYHTEGDWCVENSGRMLCETFGQCGVWNCRISDFMCPRYEYNKQTVPHRGKGDCSGATKAGGRGSRKYATTVIPPLSVAVFVAAAASRLGL 274          
BLAST of mRNA_Ecto-sp6_S_contig108.1130.1 vs. uniprot
Match: A0A835Z9M4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M4_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.610e-61
Identity = 88/163 (53.99%), Postives = 116/163 (71.17%), Query Frame = 0
Query:   81 CNVTLYDQWYDSPYSGALLEDLVDFWIFPDAELTNGQALEVVSSTCRVMMDTLRLDRAGRNGPVQDKYIYDVMCANECTLSDSIREEAMELSSCTCLELSTQPSNPIYHTEGDWCVENSGRMLCETFGQCGAWNCRISDFMCPRYEYNKQTVPHRGKGDCSGA 243
            C++ LY  WY+  Y G L ++  +FWIF  AEL+NGQA+E  ++ C++ ++ LRLDRAGR+GPV++ +I+DVMC++EC  SD++R  AM    C CL LSTQ   P Y   GDWC  NSGR+LC TF QCG W CR+ DFMCPR+EYN+  V  RG G+CSGA
Sbjct:   36 CSLDLYQAWYNKAYEGPL-QNTPNFWIFSSAELSNGQAMEKAATKCKLKLEQLRLDRAGRHGPVEEWWIFDVMCSDECVQSDALRRAAMAACGCDCLALSTQAGAPSYRAAGDWCAHNSGRLLCATFYQCGTWACRVGDFMCPRFEYNQYRVAFRGPGNCSGA 197          
BLAST of mRNA_Ecto-sp6_S_contig108.1130.1 vs. uniprot
Match: A0A482SVE4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVE4_9ARCH)

HSP 1 Score: 166 bits (421), Expect = 2.710e-47
Identity = 78/175 (44.57%), Postives = 110/175 (62.86%), Query Frame = 0
Query:   80 TCNVTLYDQWYDSPYSGALLEDLVDFWIF---PDAELTNGQALEVVSSTCRVMMDTLRLDRAGRNGPVQDKYIYDVMCANECTLSDSIREEAMELSSCTCLELSTQPSNPIYHTEGDWCVENSGRMLCETFGQCGAWNCRISDFMCPRYEYNKQTVPHRGKGDCSGAKRAGGRGS 251
            TCN+T Y QW +  Y G L  D   FW++   P   L N  A+ +    C+ M ++L L R+GR GP+  +  Y +MC + C  +D++ E AM ++ C+CLELSTQP +  +  EGDWC +N+ R+LC+  G CG WNCRI DFMCPRYE+NK+ +P++G G C   + A  RGS
Sbjct:   33 TCNLTRYQQWLNERYIGFLASDSA-FWMYQTQPQIVLNNFFAMSLALRGCQRMFESLYLYRSGRMGPINIQDSYKIMCRDYCIENDNLHEIAMNITGCSCLELSTQPGDISFTKEGDWCSQNTARLLCDIVGYCGVWNCRIDDFMCPRYEWNKKIIPYKGPGTC--IRGAAARGS 204          
BLAST of mRNA_Ecto-sp6_S_contig108.1130.1 vs. uniprot
Match: A0A485LNX5_9STRA (Aste57867_23263 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNX5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.970e-23
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 0
Query:  104 DFWIFPDAELTNGQALEVVSSTCRVMMDTLRLDRAGRNGPVQDKYIYDVMCANECTLSDSIREEAMELSSCTCLELSTQPSNPIYHTEGDWCVENSGRMLCETFGQCGAWNCRISDFMCPRYEYNK 229
            D  ++ D    +G+A+ V+SSTC   +  L+   AGR GPV    +  VMC++ C  SD + + AM+ S C C +LST           D+C +NS R+LC   G CG W C++ DFMCPRY++++
Sbjct:   65 DLSVYADYLANDGKAMFVLSSTCEASIQYLKQRLAGRFGPVLQSDMEIVMCSDACVQSDVMHQGAMDRSHCLCSQLSTDS-----FISNDFCRQNSARLLCSILGVCGTWECKMEDFMCPRYDWDR 185          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig108.1130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K8D8_9PHAE1.060e-18193.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9M4_9STRA1.610e-6153.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SVE4_9ARCH2.710e-4744.57Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A485LNX5_9STRA1.970e-2338.89Aste57867_23263 protein n=1 Tax=Aphanomyces stella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..277
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..57
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig108contigEcto-sp6_S_contig108:122336..125617 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig108.1130.1mRNA_Ecto-sp6_S_contig108.1130.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig108 121577..125617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig108.1130.1 ID=prot_Ecto-sp6_S_contig108.1130.1|Name=mRNA_Ecto-sp6_S_contig108.1130.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=278bp
MESAERYLPRPSRPPSLPRATTRRPIKRQRRRIALLAEFAAAPPSFLLQV
VVVASAISSALAQLSSDAELSVGSVQDALTCNVTLYDQWYDSPYSGALLE
DLVDFWIFPDAELTNGQALEVVSSTCRVMMDTLRLDRAGRNGPVQDKYIY
DVMCANECTLSDSIREEAMELSSCTCLELSTQPSNPIYHTEGDWCVENSG
RMLCETFGQCGAWNCRISDFMCPRYEYNKQTVPHRGKGDCSGAKRAGGRG
SREYATTVIPPLSVAVFVAAAVSRIGL*
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