prot_Ecto-sp6_S_contig107.1114.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig107.1114.1
Unique Name	prot_Ecto-sp6_S_contig107.1114.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	127

Homology

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BLAST of mRNA_Ecto-sp6_S_contig107.1114.1 vs. uniprot
Match: D7FQN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN7_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 1.530e-70
Identity = 101/105 (96.19%), Postives = 104/105 (99.05%), Query Frame = 0

Query:   22 QVCHVPCTRVNCSREKRGAWSSGSSRNASDRMAFPTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSKDNTGIGFTVVITSAFSMWLLWAMAWFHQWHPLITPEFP 126
            +VCHVPCTRVNC+REKRGA SSGS+RNASDRMAFPTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSKDNTGIGFTVVITSAFSMWLLWAMAWFHQWHPLITPEFP
Sbjct:   16 KVCHVPCTRVNCTREKRGAGSSGSNRNASDRMAFPTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSKDNTGIGFTVVITSAFSMWLLWAMAWFHQWHPLITPEFP 120

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BLAST of mRNA_Ecto-sp6_S_contig107.1114.1 vs. uniprot
Match: A0A6H5KZQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZQ5_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 9.460e-49
Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0

Query:   53 MAFPTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSKDNTGIGFTVVITSAFSMWLLWAMAWFHQWHPLITPEFP 126
            MAFPTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSK+NTGIGFTVVITSAFSMWLLWAMAWFHQWHPLITPEFP
Sbjct:    1 MAFPTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSKENTGIGFTVVITSAFSMWLLWAMAWFHQWHPLITPEFP 74

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BLAST of mRNA_Ecto-sp6_S_contig107.1114.1 vs. uniprot
Match: A0A835YSN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.020e-20
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 0

Query:   56 PTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSKDNTGIGFTVVITSAFSMWLLWAMAWFHQWHPLITPEFP 126
            P P+L GTL F   CL ++G+ +AG ++G+L+K    IG+ VV+ S+  MWLLW MAW HQWHPL+ P +P
Sbjct:    5 PLPILYGTLVFSAMCLSVMGLCRAGTMTGALTKPEAEIGYVVVVLSSVCMWLLWMMAWLHQWHPLVEPLYP 75

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig107.1114.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig107.1114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FQN7_ECTSI	1.530e-70	96.19	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KZQ5_9PHAE	9.460e-49	98.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YSN8_9STRA	1.020e-20	50.70	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008389	ATPase, V0 complex, subunit e1/e2	PFAM	PF05493	ATP_synt_H	coord: 65..124 e-value: 6.6E-14 score: 52.1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..58
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 115..126
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 92..114
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 59..80
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 81..91
None	No IPR available	TMHMM	TMhelix		coord: 92..114
None	No IPR available	TMHMM	TMhelix		coord: 55..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig107	contig	Ecto-sp6_S_contig107:583162..585529 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig107.1114.1	mRNA_Ecto-sp6_S_contig107.1114.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig107 583162..585529 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig107.1114.1 ID=prot_Ecto-sp6_S_contig107.1114.1|Name=mRNA_Ecto-sp6_S_contig107.1114.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=127bp
MTLRPVCPHLRGHLRKDRKTQQVCHVPCTRVNCSREKRGAWSSGSSRNAS
DRMAFPTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSKDNTGIGFTVVIT
SAFSMWLLWAMAWFHQWHPLITPEFP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008389	ATPase_V0-cplx_e1/e2_su