prot_Ecto-sp6_S_contig106.1042.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig106.1042.1
Unique Nameprot_Ecto-sp6_S_contig106.1042.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length237
Homology
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BLAST of mRNA_Ecto-sp6_S_contig106.1042.1 vs. uniprot
Match: D7G4B9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B9_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 9.400e-28
Identity = 90/142 (63.38%), Postives = 95/142 (66.90%), Query Frame = 0 
Query:   96 MAAMRGGRGGIEDELVGAAMQISTLGKENKRVKRELASAVSENARRPKTHEDSRKKLELAHSKEIEDMTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPANRRRVTAIGVRPISPV 237
            MAAMRGGRGGIED+L+GA  +IS L KENK VKR+LASAVSENAR  KTHEDSRKKLELAH+KEIEDMTKA                                     XXXXXXXXXXXXXXXX  NRRRVTAIGVR ISPV
Sbjct:    1 MAAMRGGRGGIEDDLIGAVKEISKLSKENKTVKRDLASAVSENARLVKTHEDSRKKLELAHAKEIEDMTKAIEDAKKNEREAIETAEKTFAELKNCTIEKEKIKTELGXXXXXXXXXXXXXXXXXXNRRRVTAIGVRQISPV 142
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BLAST of mRNA_Ecto-sp6_S_contig106.1042.1 vs. uniprot
Match: A0A6H5KZ20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ20_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.410e-22
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 0 
Query:   96 MAAMRGGRGGIEDELVGAAMQISTLGKENKRVKRELASAVSENARRPKT----HEDSRKKLELAHSKEIEDMTK 165
            MAAMRGGRGGIEDELVGA MQ+STLGKENK VKRELASA+SENAR  K     HE+ R+KLELAH+KEIED+ K
Sbjct:    1 MAAMRGGRGGIEDELVGAVMQMSTLGKENKTVKRELASALSENARLTKASAWAHEECREKLELAHAKEIEDLKK 74
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4B9_ECTSI9.400e-2863.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ20_9PHAE2.410e-2277.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig106contigEcto-sp6_S_contig106:184337..188635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig106.1042.1mRNA_Ecto-sp6_S_contig106.1042.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig106 184337..188635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig106.1042.1 ID=prot_Ecto-sp6_S_contig106.1042.1|Name=mRNA_Ecto-sp6_S_contig106.1042.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=237bp
VLGLVLLYTAHSRPLSSRVSSLPTLSPFHTPEEVRKLVSYGDNLRRRVCI
SRGQTEQEANFTALTAAKELLREGTAHTFVPSKKETKGSECGWSIMAAMR
GGRGGIEDELVGAAMQISTLGKENKRVKRELASAVSENARRPKTHEDSRK
KLELAHSKEIEDMTKAIEDAKKNEQEAIETAEKTFAELKNCTIEKEKIKT
ELGEARAALAEAAAVTARAPANRRRVTAIGVRPISPV
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