prot_Ecto-sp6_S_contig106.1038.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig106.1038.1
Unique Nameprot_Ecto-sp6_S_contig106.1038.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length59
Homology
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BLAST of mRNA_Ecto-sp6_S_contig106.1038.1 vs. uniprot
Match: D7G4B5_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B5_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 1.190e-27
Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 0 
Query:    2 GKVKEEMWTDVIRGAETREGEPAMGGSPLGESFPLDGCTRKPTHGVKGKKAEFCVS 57
            G VKEEMWTD IRGAETR+GE A+GGSPLGES PLDGCTRKPTHGVKGKKA FCVS
Sbjct:   16 GNVKEEMWTDGIRGAETRKGEQALGGSPLGESCPLDGCTRKPTHGVKGKKAVFCVS 71
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BLAST of mRNA_Ecto-sp6_S_contig106.1038.1 vs. uniprot
Match: D7G4X8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X8_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 1.780e-12
Identity = 39/57 (68.42%), Postives = 41/57 (71.93%), Query Frame = 0 
Query:    2 GKVKEEMWTDVIRGAET-REGEPAMGGSPLG-ESFPLDGCTRKPTHGVKGKKAEFCV 56
            G VKEEMW+D IR AE  REGE AM  S +G  S  L GCTRKPTHGV GKKAEFC 
Sbjct:   16 GVVKEEMWSDDIREAEDEREGELAMSDSHVGGSSCTLYGCTRKPTHGVAGKKAEFCA 72
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4B5_ECTSI1.190e-2787.50EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G4X8_ECTSI1.780e-1268.42EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig106contigEcto-sp6_S_contig106:163753..163929 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig106.1038.1mRNA_Ecto-sp6_S_contig106.1038.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig106 163534..163972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig106.1038.1 ID=prot_Ecto-sp6_S_contig106.1038.1|Name=mRNA_Ecto-sp6_S_contig106.1038.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=59bp
MGKVKEEMWTDVIRGAETREGEPAMGGSPLGESFPLDGCTRKPTHGVKGK
KAEFCVSM*
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