prot_Ecto-sp6_S_contig106.1030.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig106.1030.1
Unique Nameprot_Ecto-sp6_S_contig106.1030.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length332
Homology
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BLAST of mRNA_Ecto-sp6_S_contig106.1030.1 vs. uniprot
Match: D7G4A8_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A8_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 1.030e-146
Identity = 311/318 (97.80%), Postives = 312/318 (98.11%), Query Frame = 0 
Query:    1 MAQDHEMLQLLLRSGAMWASSLNIPWFLAGAGVGVPAAVGTVTTGNSKLLSLATTLGGVLGGVAADRLSTTISESLAGNDVGGXXXXGCEFTCYDLLTKGVGPACLLLVVLSRSIRSEPSVAVKPAAAVALAALLLEPLFSAYVLGXXXXXXXXXXXXXXXXTA--TRSGLARLLLLRDVPHRVLGQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXLVARARWLTAGAQLVLWAAVVLAYANVSLRLSRGPPGKTVGGYMSALRSLAAKKRGTGGWVRIDQWGTGXXXXXXXXXXXXXXXX-ARANGLLGSLYETLMG 315
            MAQDHEMLQLLLRSGAMWASSLNIPWFLAGAGVGVPAAVGTVTTGNSKLLSLATTLGGVLGGVAADRLSTTISESLAGNDVG XXXXGCEFTCYD+LTKGVGPACLLLVVLSRSIRSEPSVAVKPAAAVALAALLLEPLFSAYVLGXXXXXXXXXXXXXXXX    TRSGLARLLLLRDVPHRVLGQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXLVARARWLTAGAQLVLWAAVVLAYANVSLRLSRGPPGKTVGGYMSALRSLAAKKRGTGGWVRIDQWGTGXXXXXXXXXXXXXXXX ARANGLLGSLYETLMG
Sbjct:    1 MAQDHEMLQLLLRSGAMWASSLNIPWFLAGAGVGVPAAVGTVTTGNSKLLSLATTLGGVLGGVAADRLSTTISESLAGNDVGXXXXXGCEFTCYDVLTKGVGPACLLLVVLSRSIRSEPSVAVKPAAAVALAALLLEPLFSAYVLGXXXXXXXXXXXXXXXXXXXXTRSGLARLLLLRDVPHRVLGQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXLVARARWLTAGAQLVLWAAVVLAYANVSLRLSRGPPGKTVGGYMSALRSLAAKKRGTGGWVRIDQWGTGXXXXXXXXXXXXXXXXXARANGLLGSLYETLMG 318
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4A8_ECTSI1.030e-14697.80C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 216..220
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..154
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 242..331
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig106contigEcto-sp6_S_contig106:88792..91667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig106.1030.1mRNA_Ecto-sp6_S_contig106.1030.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig106 88792..92777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig106.1030.1 ID=prot_Ecto-sp6_S_contig106.1030.1|Name=mRNA_Ecto-sp6_S_contig106.1030.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=332bp
MAQDHEMLQLLLRSGAMWASSLNIPWFLAGAGVGVPAAVGTVTTGNSKLL
SLATTLGGVLGGVAADRLSTTISESLAGNDVGGGGGGGCEFTCYDLLTKG
VGPACLLLVVLSRSIRSEPSVAVKPAAAVALAALLLEPLFSAYVLGGGGA
SNSTVAPAAAAATATRSGLARLLLLRDVPHRVLGQVGGGGGRRRSAAAAA
TAASASAAASAAAALVARARWLTAGAQLVLWAAVVLAYANVSLRLSRGPP
GKTVGGYMSALRSLAAKKRGTGGWVRIDQWGTGGGGGGGGCDGSAGGGGA
RANGLLGSLYETLMGGGGWGRRPHLPRGYGA*
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