prot_Ecto-sp6_S_contig106.1026.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig106.1026.1
Unique Nameprot_Ecto-sp6_S_contig106.1026.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length565
Homology
BLAST of mRNA_Ecto-sp6_S_contig106.1026.1 vs. uniprot
Match: D7G4A4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A4_ECTSI)

HSP 1 Score: 995 bits (2573), Expect = 0.000e+0
Identity = 538/567 (94.89%), Postives = 546/567 (96.30%), Query Frame = 0
Query:    1 MPAASDVENAGDYFEVKQGSSELRKLAFTVEDASYSCPDGPSSSLGETGRTSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISVSISVRGKRRRDFVEVKRGVGLAHGTRTDVKVGHLPCVYVRVECRRRKTGSGGVSLYELVPVGVPARCVGLFMGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAALERLILPPSFLRPAGGAMNPYDPDPVRKGPASTGAGVAHALLHTHRLLSPTPSPRLVPGGEGLRGPHFPPFPXXXXXXXXXXXATSGVYFFRGGRKDELPIDVGRRQGRGGVVSFDQGYSPASHPYPPRGEENXXXXXXXXXXAGVGRRGGVPLPYQGMTARASHHPFRNLTHGPVASAAGVAGTPADRNADPGRENETEGRLAAPRLEQQPEPRHSYSSSGNGGGHFFGARTGAGDRRPSGGSVAFARPFPGHRWGVEGRDEGGAGVDSSGNPDGLRRQKSIGNEERRKDSFGPDFGYDEARTGERNSSPYPLGSHSEXXXXXXXX---GDSLSDYAGYLRGNHSRDNAGVSSGGSERGGVQSGPHRHAAVA 564
            MPAASDVENAGDYFEVKQGSSELRKLAFTVEDASYSCPDGPSSSLGETGRTSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEIS+SISVRGKRRRDFVEVKRGVGLAHGTRTDVKVGHLPCVYVRVECRRRKTGSGGVSLYELVPVG+PARCVGLFMGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAALERLILPPSFLRPAGGA+NPYDPDPVRKGPASTGAGVAHALLHTHRLLSPTPSPRL PGGEGLRGPHF    XXXXXXXXXXXATSGV+FFRG RKDELPIDVGRRQGRG VVSF+Q YSPASHPYPPRGEE+XXXXXXXXX AGVGRR GVPLPYQGMTARASHHPFR+LTHGPVA+AAGVAGTPADRNADPGREN TEGRLAAPRLEQQP PRHSYSSSGNGGGHFFGARTGAGDRRPSGGSVA ARPFP HRWGVEGRDEGGAGVDSSGN DGLRRQKSIGNEERRKDSFGP FGYDEARTG RNSSPYPLGSHSEXXXXXXXX   GDSLSDYAGYLRGNHSRDNA VSSGGSERGGVQSGPHRHAAVA
Sbjct:    1 MPAASDVENAGDYFEVKQGSSELRKLAFTVEDASYSCPDGPSSSLGETGRTSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISISISVRGKRRRDFVEVKRGVGLAHGTRTDVKVGHLPCVYVRVECRRRKTGSGGVSLYELVPVGIPARCVGLFMGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAALERLILPPSFLRPAGGAVNPYDPDPVRKGPASTGAGVAHALLHTHRLLSPTPSPRLAPGGEGLRGPHFXXXXXXXXXXXXXXXATSGVHFFRGERKDELPIDVGRRQGRGAVVSFEQDYSPASHPYPPRGEEDXXXXXXXXX-AGVGRRVGVPLPYQGMTARASHHPFRHLTHGPVANAAGVAGTPADRNADPGRENATEGRLAAPRLEQQPMPRHSYSSSGNGGGHFFGARTGAGDRRPSGGSVASARPFPVHRWGVEGRDEGGAGVDSSGNLDGLRRQKSIGNEERRKDSFGPGFGYDEARTGGRNSSPYPLGSHSEXXXXXXXXXXXGDSLSDYAGYLRGNHSRDNARVSSGGSERGGVQSGPHRHAAVA 566          
BLAST of mRNA_Ecto-sp6_S_contig106.1026.1 vs. uniprot
Match: A0A6H5JC74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC74_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 6.080e-63
Identity = 111/125 (88.80%), Postives = 114/125 (91.20%), Query Frame = 0
Query:  338 AGVGRRGGVPLPYQGMTARASHHPFRNLTHGPVASAAGVAGTPADRNADPGRENETEGRLAAPRLEQQPEPRHSYSSSGNGGGHFFGARTGAGDRRPSGGSVAFARPFPGHRWGVEGRDEGGAGV 462
            AGVGRRGGVPLPYQGMTA ASHHPFRNLTHGPVA+AAGVAGTPADRNADPGRENETEGRLAAP LEQQPEPRHSYSSSG+GG HFF ARTG GDRRPSGGS A ARPF  HR GVEGR+EGGAG 
Sbjct:   26 AGVGRRGGVPLPYQGMTAWASHHPFRNLTHGPVANAAGVAGTPADRNADPGRENETEGRLAAPPLEQQPEPRHSYSSSGDGGVHFFRARTGGGDRRPSGGSNASARPFLVHRRGVEGREEGGAGA 150          
BLAST of mRNA_Ecto-sp6_S_contig106.1026.1 vs. uniprot
Match: D7G4C0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4C0_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.440e-14
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0
Query:  161 MGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAALE 196
            MGPCMEDLTYKSTERLLF PSLRTSHAPVCHRAALE
Sbjct:    1 MGPCMEDLTYKSTERLLFDPSLRTSHAPVCHRAALE 36          
BLAST of mRNA_Ecto-sp6_S_contig106.1026.1 vs. uniprot
Match: K3XB97_GLOUD (XRCC1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB97_GLOUD)

HSP 1 Score: 82.4 bits (202), Expect = 1.000e-13
Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 0
Query:   16 VKQGSSELRKLAFTVEDASYSCPDGPSSSLGETGRTSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISVSISVRGKRRRDFVEVKRGVGLAHGTRTDVKVGHLPCVYVRVECRRRKTGSGGVSLYELVPVGVPARCVGLFMGPCMEDLTYKSTERLLFGPSLRTS 185
            VK     +  + F V  AS       +++L E    + W+  A     V+L L  K LLS +R+ N+++  + VS++V   R R +V VKR   + H     +K+G +PC ++R+E  R    S  ++++ ++P+GVP   +    GP + +L   +TE LLFG SLR S
Sbjct:   78 VKTEDFGVGPVEFHVRHASGMASSCTTANLLEYSTKTWWQSYARTKETVVLALTSKTLLSEIRILNKNACAVDVSVAVEN-RPRSYVSVKRMQMMPHAREVSIKIGFIPCQFIRLEFMRHSHAS--IAVHGILPLGVPCHEIEDGSGPSLCNLLNHATENLLFGSSLRAS 244          
BLAST of mRNA_Ecto-sp6_S_contig106.1026.1 vs. uniprot
Match: A0A5D6YRF0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YRF0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.460e-12
Identity = 52/160 (32.50%), Postives = 87/160 (54.37%), Query Frame = 0
Query:   26 LAFTVEDASYSCPDGPSSSLGETGRTSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISVSISVRGKRRRDFVEVKRGVGLAHGTRTDVKVGHLPCVYVRVECRRRKTGSGGVSLYELVPVGVPARCVGLFMGPCMEDLTYKSTERLLFGPSLRTS 185
            + F V  AS +      ++L +    SCW+  +     V+L L +K+LLS +R+ N+++  + VS++V   R R +V VKR   +AH     VK+G +PC +VR+E  R    S  ++++ ++ +GV    +    GP + +L   +TE LLFG SL  S
Sbjct:   67 IGFRVRRASGAAGGFQPANLQQYSARSCWQSFSRAKESVVLELDDKSLLSEIRILNKNACAVDVSLAVED-RPRSYVTVKRMQTMAHSREVGVKIGFIPCRFVRLEFSRHSHAS--IAVHGVMLLGVRCSEIEDGSGPSLCNLLSHATENLLFGSSLHAS 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4A4_ECTSI0.000e+094.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JC74_9PHAE6.080e-6388.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4C0_ECTSI1.440e-1497.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3XB97_GLOUD1.000e-1331.76XRCC1_N domain-containing protein n=1 Tax=Globispo... [more]
A0A5D6YRF0_9STRA1.460e-1232.50Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig106contigEcto-sp6_S_contig106:47981..52750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig106.1026.1mRNA_Ecto-sp6_S_contig106.1026.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig106 47981..52750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig106.1026.1 ID=prot_Ecto-sp6_S_contig106.1026.1|Name=mRNA_Ecto-sp6_S_contig106.1026.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=565bp
MPAASDVENAGDYFEVKQGSSELRKLAFTVEDASYSCPDGPSSSLGETGR
TSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISVSISVRGKRRRD
FVEVKRGVGLAHGTRTDVKVGHLPCVYVRVECRRRKTGSGGVSLYELVPV
GVPARCVGLFMGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAALERLIL
PPSFLRPAGGAMNPYDPDPVRKGPASTGAGVAHALLHTHRLLSPTPSPRL
VPGGEGLRGPHFPPFPDAATAAAAAAGATSGVYFFRGGRKDELPIDVGRR
QGRGGVVSFDQGYSPASHPYPPRGEENSGGGGGGSSSAGVGRRGGVPLPY
QGMTARASHHPFRNLTHGPVASAAGVAGTPADRNADPGRENETEGRLAAP
RLEQQPEPRHSYSSSGNGGGHFFGARTGAGDRRPSGGSVAFARPFPGHRW
GVEGRDEGGAGVDSSGNPDGLRRQKSIGNEERRKDSFGPDFGYDEARTGE
RNSSPYPLGSHSEEEEEEEEEGDSLSDYAGYLRGNHSRDNAGVSSGGSER
GGVQSGPHRHAAVA*
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