prot_Ecto-sp6_S_contig105.1015.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig105.1015.1
Unique Nameprot_Ecto-sp6_S_contig105.1015.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length82
Homology
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BLAST of mRNA_Ecto-sp6_S_contig105.1015.1 vs. uniprot
Match: A0A6H5L1Q6_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Q6_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 7.010e-13
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0 
Query:   35 ITLIKREESSVDTPGAHGRRRTIGLVLRDTGRATRMCAVPTAVQHLLR 82
            I +I++       PGAHGRRRTIGLVLRDTGRATRMCA+PTA QH+LR
Sbjct:  503 IEVIRQFHDGDAGPGAHGRRRTIGLVLRDTGRATRMCAIPTAAQHILR 550
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig105.1015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1Q6_9PHAE7.010e-1370.83Reverse transcriptase domain-containing protein (F... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig105contigEcto-sp6_S_contig105:508865..509980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig105.1015.1mRNA_Ecto-sp6_S_contig105.1015.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig105 508865..509980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig105.1015.1 ID=prot_Ecto-sp6_S_contig105.1015.1|Name=mRNA_Ecto-sp6_S_contig105.1015.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=82bp
MGSMSRFRISSTRGTVGPLLPVINDDRINSCLTCITLIKREESSVDTPGA
HGRRRTIGLVLRDTGRATRMCAVPTAVQHLLR
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