prot_Ecto-sp6_S_contig104.962.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig104.962.1
Unique Nameprot_Ecto-sp6_S_contig104.962.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length108
Homology
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BLAST of mRNA_Ecto-sp6_S_contig104.962.1 vs. uniprot
Match: D7FIS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS8_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 5.090e-64
Identity = 102/108 (94.44%), Postives = 102/108 (94.44%), Query Frame = 0 
Query:    1 MHTSREGACGVVHGDGRSDTSVGRGRVHGKGSRPIESTTGAGSLAPGRRAPPTSSGEWSKKGSTVKRGQAPAGDGGARPRNTQLRLEGEDGGDVAGHQQGPAAAAVPD 108
            MHTSREGACGVVHGDGRSDTSVGRGRVHGKGSRPIES  GAGSLAPGRRAPPT SGEWSK GST KRGQAPAGDGGARPRNTQLRLE EDGGDVAGHQQGPAAAAVPD
Sbjct:    1 MHTSREGACGVVHGDGRSDTSVGRGRVHGKGSRPIESNPGAGSLAPGRRAPPTRSGEWSKTGSTDKRGQAPAGDGGARPRNTQLRLEEEDGGDVAGHQQGPAAAAVPD 108
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BLAST of mRNA_Ecto-sp6_S_contig104.962.1 vs. uniprot
Match: D7G1L5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L5_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 4.460e-19
Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0 
Query:    1 MHTSREGACGVVHGDGRSDTSVGRGRVHGKGSRPIESTTGAGSLA 45
            MHTSREGACGVVHGDGRSDTSVGRGRVHGKGSRPIEST   G +A
Sbjct:    1 MHTSREGACGVVHGDGRSDTSVGRGRVHGKGSRPIESTNNWGGVA 45
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIS8_ECTSI5.090e-6494.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1L5_ECTSI4.460e-1988.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig104contigEcto-sp6_S_contig104:462194..462517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig104.962.1mRNA_Ecto-sp6_S_contig104.962.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig104 462194..462517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig104.962.1 ID=prot_Ecto-sp6_S_contig104.962.1|Name=mRNA_Ecto-sp6_S_contig104.962.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=108bp
MHTSREGACGVVHGDGRSDTSVGRGRVHGKGSRPIESTTGAGSLAPGRRA
PPTSSGEWSKKGSTVKRGQAPAGDGGARPRNTQLRLEGEDGGDVAGHQQG
PAAAAVPD
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