prot_Ecto-sp6_S_contig104.949.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig104.949.1
Unique Name	prot_Ecto-sp6_S_contig104.949.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	129

Homology

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: D7G6S7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6S7_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 5.960e-95
Identity = 126/128 (98.44%), Postives = 128/128 (100.00%), Query Frame = 0

Query:    1 MAAETKGQEPQDVVMGESGKGPDPGIGQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128
            MAAETKGQEPQDVVMGESGKGP+PGIGQVAPRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS
Sbjct:    1 MAAETKGQEPQDVVMGESGKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S2Y0P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0P1_9STRA)

HSP 1 Score: 222 bits (566), Expect = 4.230e-73
Identity = 103/126 (81.75%), Postives = 111/126 (88.10%), Query Frame = 0

Query:    1 MAAETKGQEPQDVVMGESGKGPDPGIGQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            MAAETKG+   DV M ++ +  +       PRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLS+AFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIE+IPGYGSL
Sbjct:    1 MAAETKGE--TDVEMLDAKESSN------VPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSVAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIEKIPGYGSL 118

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A1E7FMU3_9STRA (Ring-box protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMU3_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.030e-70
Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0

Query:   26 IGQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128
            +G  APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG LAS
Sbjct:   25 VGSAAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLAS 127

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S3K273_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K273_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.030e-70
Identity = 93/98 (94.90%), Postives = 96/98 (97.96%), Query Frame = 0

Query:   31 PRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128
            P+FEIK+WNA+ MWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL S
Sbjct:   62 PKFEIKKWNAICMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLGS 159

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: B7G7T1_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7T1_PHATC)

HSP 1 Score: 213 bits (541), Expect = 4.340e-69
Identity = 98/125 (78.40%), Postives = 106/125 (84.80%), Query Frame = 0

Query:    8 QEPQDVVMGESGKGPD------PGIGQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            ++ +DV M E+ +G D      P     APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:    8 EDSKDVEMEETVEGADSEEVVKPKASGSAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 132

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A4D9CQ35_9STRA (RING-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ35_9STRA)

HSP 1 Score: 211 bits (536), Expect = 3.050e-68
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 0

Query:   27 GQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            G  APRFEIK+WNAV MWSWDICADTCAICRN+LNEPSIEYQANPSPNNENGLSIAFGCC HVFHLDCIQRWLK RSVCPLCNKEWEF+KIERIPGY +L
Sbjct:   39 GAAAPRFEIKKWNAVTMWSWDICADTCAICRNNLNEPSIEYQANPSPNNENGLSIAFGCCSHVFHLDCIQRWLKARSVCPLCNKEWEFSKIERIPGYNAL 138

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A1Z5J6S6_FISSO (RING-box protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6S6_FISSO)

HSP 1 Score: 210 bits (534), Expect = 3.310e-68
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0

Query:   30 APRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   23 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 119

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S3PD50_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD50_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.440e-68
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0

Query:   30 APRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   32 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 128

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S1BRM9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRM9_9STRA)

HSP 1 Score: 210 bits (535), Expect = 5.110e-68
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0

Query:   30 APRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            A RFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEWE+AKIE+IPG+GSL
Sbjct:   47 AKRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGACGHVFHLDCIQRWLKTRSVCPLCNKEWEYAKIEKIPGFGSL 143

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BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S1UML7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UML7_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.650e-67
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0

Query:   30 APRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
            APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   72 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 168

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6S7_ECTSI	5.960e-95	98.44	RING-type domain-containing protein n=2 Tax=Ectoca...	[more]
A0A7S2Y0P1_9STRA	4.230e-73	81.75	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A1E7FMU3_9STRA	1.030e-70	91.26	Ring-box protein n=1 Tax=Fragilariopsis cylindrus ...	[more]
A0A7S3K273_9STRA	1.030e-70	94.90	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
B7G7T1_PHATC	4.340e-69	78.40	Predicted protein n=4 Tax=Phaeodactylum tricornutu...	[more]
A0A4D9CQ35_9STRA	3.050e-68	90.00	RING-type domain-containing protein n=3 Tax=Monodo...	[more]
A0A1Z5J6S6_FISSO	3.310e-68	93.81	RING-box protein 1 n=2 Tax=Fistulifera solaris Tax...	[more]
A0A7S3PD50_9STRA	4.440e-68	93.81	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A7S1BRM9_9STRA	5.110e-68	93.81	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A7S1UML7_9STRA	1.650e-67	93.81	Hypothetical protein n=1 Tax=Grammatophora oceanic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 53..108 e-value: 1.4E-5 score: 34.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 53..109 score: 11.929
IPR024766	Zinc finger, RING-H2-type	PFAM	PF12678	zf-rbx1	coord: 51..109 e-value: 7.9E-21 score: 74.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 26..119 e-value: 2.1E-29 score: 103.6
None	No IPR available	PANTHER	PTHR11210:SF2	E3 UBIQUITIN-PROTEIN LIGASE RBX1	coord: 29..118
None	No IPR available	PANTHER	PTHR11210	RING BOX	coord: 29..118
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 31..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig104	contig	Ecto-sp6_S_contig104:287354..288929 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig104.949.1	mRNA_Ecto-sp6_S_contig104.949.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig104 286469..288929 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig104.949.1 ID=prot_Ecto-sp6_S_contig104.949.1|Name=mRNA_Ecto-sp6_S_contig104.949.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=129bp
MAAETKGQEPQDVVMGESGKGPDPGIGQVAPRFEIKRWNAVAMWSWDICA
DTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLK
TRSVCPLCNKEWEFAKIERIPGYGSLAS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR024766	Znf_RING_H2
IPR013083	Znf_RING/FYVE/PHD