mRNA_Ecto-sp6_S_contig104.949.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: D7G6S7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6S7_ECTSI) HSP 1 Score: 278 bits (710), Expect = 2.890e-90 Identity = 126/128 (98.44%), Postives = 128/128 (100.00%), Query Frame = 1
Query: 1 MAAETKGQEPQDVVMGESGKGPDPGIGQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 384
MAAETKGQEPQDVVMGESGKGP+PGIGQVAPRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS
Sbjct: 1 MAAETKGQEPQDVVMGESGKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 128
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S2Y0P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0P1_9STRA) HSP 1 Score: 222 bits (566), Expect = 1.120e-68 Identity = 103/126 (81.75%), Postives = 111/126 (88.10%), Query Frame = 1
Query: 1 MAAETKGQEPQDVVMGESGKGPDPGIGQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 378
MAAETKG+ DV M ++ + + PRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLS+AFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIE+IPGYGSL
Sbjct: 1 MAAETKGE--TDVEMLDAKESSN------VPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSVAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIEKIPGYGSL 118
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A1E7FMU3_9STRA (Ring-box protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMU3_9STRA) HSP 1 Score: 216 bits (551), Expect = 2.520e-66 Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 1
Query: 76 IGQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 384
+G APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG LAS
Sbjct: 25 VGSAAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQLAS 127
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S3K273_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K273_9STRA) HSP 1 Score: 218 bits (554), Expect = 2.570e-66 Identity = 93/98 (94.90%), Postives = 96/98 (97.96%), Query Frame = 1
Query: 91 PRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLAS 384
P+FEIK+WNA+ MWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL S
Sbjct: 62 PKFEIKKWNAICMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSLGS 159
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: B7G7T1_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7T1_PHATC) HSP 1 Score: 213 bits (541), Expect = 1.000e-64 Identity = 98/125 (78.40%), Postives = 106/125 (84.80%), Query Frame = 1
Query: 22 QEPQDVVMGESGKGPD------PGIGQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 378
++ +DV M E+ +G D P APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct: 8 EDSKDVEMEETVEGADSEEVVKPKASGSAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 132
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A4D9CQ35_9STRA (RING-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ35_9STRA) HSP 1 Score: 211 bits (536), Expect = 6.860e-64 Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 1
Query: 79 GQVAPRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 378
G APRFEIK+WNAV MWSWDICADTCAICRN+LNEPSIEYQANPSPNNENGLSIAFGCC HVFHLDCIQRWLK RSVCPLCNKEWEF+KIERIPGY +L
Sbjct: 39 GAAAPRFEIKKWNAVTMWSWDICADTCAICRNNLNEPSIEYQANPSPNNENGLSIAFGCCSHVFHLDCIQRWLKARSVCPLCNKEWEFSKIERIPGYNAL 138
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A1Z5J6S6_FISSO (RING-box protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6S6_FISSO) HSP 1 Score: 210 bits (534), Expect = 7.340e-64 Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 1
Query: 88 APRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 378
APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct: 23 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 119
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S3PD50_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD50_9STRA) HSP 1 Score: 210 bits (534), Expect = 9.850e-64 Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 1
Query: 88 APRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 378
APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct: 32 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 128
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S1BRM9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRM9_9STRA) HSP 1 Score: 210 bits (535), Expect = 1.140e-63 Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 1
Query: 88 APRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 378
A RFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEWE+AKIE+IPG+GSL
Sbjct: 47 AKRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGACGHVFHLDCIQRWLKTRSVCPLCNKEWEYAKIEKIPGFGSL 143
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Match: A0A7S1UML7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UML7_9STRA) HSP 1 Score: 210 bits (534), Expect = 3.660e-63 Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 1
Query: 88 APRFEIKRWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 378
APRFEIK+WNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct: 72 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 168 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig104.949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig104.949.1 >prot_Ecto-sp6_S_contig104.949.1 ID=prot_Ecto-sp6_S_contig104.949.1|Name=mRNA_Ecto-sp6_S_contig104.949.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=129bp MAAETKGQEPQDVVMGESGKGPDPGIGQVAPRFEIKRWNAVAMWSWDICAback to top mRNA from alignment at Ecto-sp6_S_contig104:286469..288929- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig104.949.1 ID=mRNA_Ecto-sp6_S_contig104.949.1|Name=mRNA_Ecto-sp6_S_contig104.949.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2461bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:286469..288929- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig104:286469..288929- >mRNA_Ecto-sp6_S_contig104.949.1 ID=mRNA_Ecto-sp6_S_contig104.949.1|Name=mRNA_Ecto-sp6_S_contig104.949.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=387bp|location=Sequence derived from alignment at Ecto-sp6_S_contig104:286469..288929- (Ectocarpus species6 EcLAC_371)back to top |