prot_Ecto-sp6_S_contig103.904.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig103.904.1
Unique Nameprot_Ecto-sp6_S_contig103.904.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length253
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.904.1 vs. uniprot
Match: D7G0U1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U1_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 4.340e-136
Identity = 237/252 (94.05%), Postives = 243/252 (96.43%), Query Frame = 0
Query:    1 MDQDGVFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTYSHRQCVKPDQAITIYKLHDHETNEDYLEFDEEVIFQTACRMCLNIKSCLREGHKLIDWRPTFAGGRVAGSSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGRAPRSARGRSASTSVVDDEMEVVEDYGDGGGSGRKVFPAGGRGRKGRTXXXXXXXXXGVAPQESTATRRGPHKRKSPASSAYPRSASSHQLVQLKVCYC 252
            MDQDG+FLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTYSHRQCVKPDQAITIYKLHDHETNEDYLEFDE++IFQTACRMCLNIKSCLREGHKLIDWRPTFAGGRVAGSSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PGRAPRSARGRSASTSVVDDEMEVVEDYGDGGG+GRKVFPAGGRGR+G  XXXXXXX     PQESTATRRGPHKRKSPASSAYPRSASSHQL+QLKVCYC
Sbjct:    1 MDQDGLFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTYSHRQCVKPDQAITIYKLHDHETNEDYLEFDEKIIFQTACRMCLNIKSCLREGHKLIDWRPTFAGGRVAGSSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PGRAPRSARGRSASTSVVDDEMEVVEDYGDGGGTGRKVFPAGGRGRRGHAXXXXXXX---XXPQESTATRRGPHKRKSPASSAYPRSASSHQLMQLKVCYC 247          
BLAST of mRNA_Ecto-sp6_S_contig103.904.1 vs. uniprot
Match: A0A6H5LER2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LER2_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 5.820e-58
Identity = 99/115 (86.09%), Postives = 103/115 (89.57%), Query Frame = 0
Query:    1 MDQDGVFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTYSHRQCVKPDQAITIYKLHDHETNEDYLEFDEEVIFQTACRMCLNIKSCLREGHKLIDWRPTFA-GGRVAG 114
            MDQDG+FLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELT SHRQCVKPDQAITIYKLHDHETNEDYLEFDEE+IFQTACRMCLNIKSCLR G     +  TF  GG+ AG
Sbjct:    1 MDQDGLFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTNSHRQCVKPDQAITIYKLHDHETNEDYLEFDEEIIFQTACRMCLNIKSCLRLGKV---FSATFGKGGKSAG 112          
BLAST of mRNA_Ecto-sp6_S_contig103.904.1 vs. uniprot
Match: D7G0T9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T9_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.370e-26
Identity = 51/113 (45.13%), Postives = 73/113 (64.60%), Query Frame = 0
Query:    1 MDQDGVFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTYSHRQCVKPDQAITIYKLHDHETNEDYLEFDEEVIFQTACRMCLNIKSCLREGHKLIDWRPTFAGGRVA 113
            MD DG  L++  CN C  NK   + C+ R+HN R++ V+ DEL   HRQCVKPDQ +TI+KL D  T E+ +E+  ++IFQ  C  C+++K+C+  GH+L DW P    GR +
Sbjct:    1 MDVDGTCLVVSPCNNCRINKNGVQACIMRKHNARLTAVKRDELAARHRQCVKPDQTMTIFKLVDRNTGEESVEYSPDMIFQRPCASCIHLKTCILGGHELTDWTPEGGRGRAS 113          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0U1_ECTSI4.340e-13694.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LER2_9PHAE5.820e-5886.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0T9_ECTSI1.370e-2645.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig103contigEcto-sp6_S_contig103:225235..230819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig103.904.1mRNA_Ecto-sp6_S_contig103.904.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig103 225235..230819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig103.904.1 ID=prot_Ecto-sp6_S_contig103.904.1|Name=mRNA_Ecto-sp6_S_contig103.904.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=253bp
MDQDGVFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTYSHRQC
VKPDQAITIYKLHDHETNEDYLEFDEEVIFQTACRMCLNIKSCLREGHKL
IDWRPTFAGGRVAGSSHPPPSPPASPPAPTPPPPPPPPADRGGGARRGGG
GPGRAPRSARGRSASTSVVDDEMEVVEDYGDGGGSGRKVFPAGGRGRKGR
TAAAAAAAAAGVAPQESTATRRGPHKRKSPASSAYPRSASSHQLVQLKVC
YC*
back to top