prot_Ecto-sp6_S_contig103.897.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig103.897.1
Unique Nameprot_Ecto-sp6_S_contig103.897.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length150
Homology
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BLAST of mRNA_Ecto-sp6_S_contig103.897.1 vs. uniprot
Match: A0A6H5JZC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC0_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 1.880e-69
Identity = 123/134 (91.79%), Postives = 124/134 (92.54%), Query Frame = 0 
Query:    1 KRPRRKSGLRPGRGWEIGAAGGGGFRLEESGGYDLCLPVGVVEANPGRRRVRLSADVRGYLCPRDEGRLLRSGLVTSSIKIGAERHSVEAITGDGTVLVLDRKYRGPAVAAGPGPEDAARMAAASGSLPRQDAA 134
            KRP R SGLRPGRGWEIGAAGGGGFRLEESGGYDLCLPVGVVEA PGRRRVRLSADVRGYLCPRDEGRLLRSGLVTSSIKIGAERHSVEAITGDGTVLVLDRKYRGPAVA  PGP DAARM AAS SLPR + A
Sbjct:  849 KRPTRISGLRPGRGWEIGAAGGGGFRLEESGGYDLCLPVGVVEATPGRRRVRLSADVRGYLCPRDEGRLLRSGLVTSSIKIGAERHSVEAITGDGTVLVLDRKYRGPAVATEPGPGDAARMTAASASLPRHNGA 982
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BLAST of mRNA_Ecto-sp6_S_contig103.897.1 vs. uniprot
Match: D7FXV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV0_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.700e-21
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 0 
Query:    1 KRPRRKSGLRPGRGWEIGAAGGGGFRLEESGGYDLCLPVGVVEANPGRRR 50
            KRPRRKSGLRPGRGWEIGAAGGGGF LEES GYDLCLPVGVVEANPGRRR
Sbjct:  645 KRPRRKSGLRPGRGWEIGAAGGGGFLLEESEGYDLCLPVGVVEANPGRRR 694
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZC0_9PHAE1.880e-6991.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXV0_ECTSI1.700e-2196.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig103contigEcto-sp6_S_contig103:182726..183175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig103.897.1mRNA_Ecto-sp6_S_contig103.897.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig103 182726..183175 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig103.897.1 ID=prot_Ecto-sp6_S_contig103.897.1|Name=mRNA_Ecto-sp6_S_contig103.897.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=150bp
KRPRRKSGLRPGRGWEIGAAGGGGFRLEESGGYDLCLPVGVVEANPGRRR
VRLSADVRGYLCPRDEGRLLRSGLVTSSIKIGAERHSVEAITGDGTVLVL
DRKYRGPAVAAGPGPEDAARMAAASGSLPRQDAAPAAAASSSAASSPDGG
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