prot_Ecto-sp6_S_contig102.864.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig102.864.1
Unique Nameprot_Ecto-sp6_S_contig102.864.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length175
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: D7G978_ECTSI (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G978_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 5.870e-88
Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0
Query:    1 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQET 127
            +PAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQET
Sbjct:    6 VPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQET 132          
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: A0A835YQX6_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX6_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.640e-66
Identity = 101/174 (58.05%), Postives = 128/174 (73.56%), Query Frame = 0
Query:    1 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPG-REDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 173
            MPAYHSK    +    CGCAILPL T +RGPAP+   G +EDI++E L+YFRAN++FRN+ +E +ADRTLIYLTF+ QQCL+E+EK   K+ A+RAL  LA + FAAPG+AGW LGT+FP      E E FK Y +QCREEL  RL +RV+ +  ++SK W  FSKR+FMGKEM
Sbjct:    1 MPAYHSKLQGTSVGDACGCAILPLRTNLRGPAPILPKGDQEDIIDETLFYFRANIMFRNFAVESNADRTLIYLTFYAQQCLREMEKTDDKQAANRALNLLANKTFAAPGEAGWQLGTIFPAPRVRDEAEMFKAYFKQCREELGTRLIERVFADG-TKSKWWQFFSKRRFMGKEM 173          
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: A0A7S1U2P7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2P7_9STRA)

HSP 1 Score: 194 bits (493), Expect = 7.700e-60
Identity = 93/173 (53.76%), Postives = 126/173 (72.83%), Query Frame = 0
Query:    1 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 173
            MPAYHSK  + +A   CGCA+LPL T+ RGPAP++  G EDI++EALYYFRANVLFRNY+I+ +ADRTLIY+T ++   L+E ++     +ASR L   A++NFA PG+AGW LGTLFP      E+E FK Y +Q REE+++RL  ++Y +   ++K W +FSKRKFMG +M
Sbjct:   42 MPAYHSKFAELDADEACGCALLPLRTSKRGPAPVSPDGEEDILDEALYYFRANVLFRNYEIKSAADRTLIYMTLYVTMILRECDRIGSATDASRQLQLSAIRNFAVPGEAGWALGTLFPPPADRNESETFKAYFKQAREEMSERLIAKLYTD-AGKNKWWAMFSKRKFMGIDM 213          
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: A0A7S2RMH4_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMH4_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.920e-58
Identity = 88/173 (50.87%), Postives = 118/173 (68.21%), Query Frame = 0
Query:    1 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 173
            MP YHSK T +  Q  CGCA+LPL T VRGPAP      +D+++E + +FRANVLFRN++I+ SADRTLIYLT ++QQCLKE E+     E  +AL  LA++ FA PG   W +G+++P   S  E E  K Y +QCREEL +R    +++ + S++K W  FSKRKFMGKE+
Sbjct:   11 MPVYHSKFTGQEGQEMCGCALLPLKTRVRGPAPPMPEDEDDVIDETIKFFRANVLFRNFEIKNSADRTLIYLTLYLQQCLKECERAKTVGEGEKALQQLALRQFAIPGDTNWAMGSMYPAPKSTAEGEGCKAYFKQCREELGRRFSQVLFLPDGSKNKWWQAFSKRKFMGKEL 183          
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: A0A7S0Q1V8_9EUKA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q1V8_9EUKA)

HSP 1 Score: 180 bits (456), Expect = 8.980e-55
Identity = 83/171 (48.54%), Postives = 122/171 (71.35%), Query Frame = 0
Query:    4 YHSKQTD-ENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 173
            YHS   D  +A+V CGC+ILP+ TT RGPAP+A  G +DI++E + +F+ANVLF++++++G ADR LIYLT +I QCLK+LE  P K EA + LT +A + FA PG   + LG+ FP   S+QE +  + YM+Q REE+ +RL  +VY ++   SK W++F+KR+FM K++
Sbjct:    7 YHSSLNDIADAEVVCGCSILPIKTTTRGPAPVASEGEDDIIDETIGFFKANVLFKHFEVKGPADRVLIYLTLYITQCLKKLEGAPSKMEALKTLTAMAHETFALPGDPAFPLGSFFPKPASSQEADLARAYMKQLREEMGRRLLTKVYGDSSEPSKFWLVFAKRRFMNKQL 177          
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: A0A0M0JZA5_9EUKA (Actin-related protein 2 3 complex subunit 3 (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JZA5_9EUKA)

HSP 1 Score: 190 bits (483), Expect = 9.960e-55
Identity = 90/169 (53.25%), Postives = 122/169 (72.19%), Query Frame = 0
Query:    4 YHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKE 172
            YHS + DE AQ  CGC+ILP+ TT RGPAPLA  G EDI++EAL +F+ANVLF++++++G  DR +IYLT +I QCL+ LEK P  +E  +ALT +A ++F  PG AG+ LG+ +P   SAQE E  + Y RQ REE  +RL  +VY E+ S SK W++F+K+KFM KE
Sbjct:    3 YHSAKNDEEAQQACGCSILPIVTTTRGPAPLAPEGTEDIIDEALGFFKANVLFKHFEVKGGGDRVMIYLTLYITQCLQRLEKCPSPQEGIKALTAMAGESFKIPGDAGFALGSFYPTPASAQEAELCRSYFRQVREETGRRLITKVYGEDGSPSKFWLVFAKKKFMNKE 171          
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: A0A8J6CIQ6_DIALT (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CIQ6_DIALT)

HSP 1 Score: 179 bits (455), Expect = 1.200e-54
Identity = 84/174 (48.28%), Postives = 122/174 (70.11%), Query Frame = 0
Query:    3 AYHSKQTDENAQ-VCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESR--SKHWMLFSKRKFMGKEM 173
            A+HS+  DE+A  + CGCA+LP+ TT RGPAP    G+EDI++E L++F+ANVLFRN+++ GSADR L+YLT ++ +CLK +E  P K +A RAL N+A+++FA PG A + LG  FP   + QE +  + Y RQ REE  +R+ ++ Y++ E+R  SK W   SKR+FM K +
Sbjct:    2 AFHSQFKDEDAATIACGCAVLPIRTTCRGPAPSLTAGKEDIIDEVLFFFKANVLFRNFEVRGSADRLLVYLTLYVTECLKRVEAAPSKADAVRALNNMALESFAIPGDASFTLGPYFPTPENRQEADFVRSYFRQLREETGRRVVEKCYIDGETRVPSKWWTSLSKRRFMNKAL 175          
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: A0A7S4BNT7_CHRCT (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BNT7_CHRCT)

HSP 1 Score: 178 bits (452), Expect = 3.100e-54
Identity = 82/170 (48.24%), Postives = 121/170 (71.18%), Query Frame = 0
Query:    4 YHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 173
            YHS     +A+  CG AILP+ T VRGPAP A    +D+++E L++F+ANVLFR+++++G+ADR LIYLT +I QCLK+LE  P +  A +ALT++A ++F  PG AG+ LGT FP   ++QE +  + Y++Q REE  +RL D+VY E+   SK W++F+KR+FM K +
Sbjct:    3 YHSSLNGVDAEAACGLAILPIKTAVRGPAPAAPAESDDVIDETLFFFKANVLFRHFELKGNADRVLIYLTLYITQCLKKLEGLPDRVSALKALTSMAHESFLIPGDAGFALGTFFPSPQTSQEADLTRAYLKQLREETGRRLLDKVYGEDGQPSKFWLVFAKRRFMNKSV 172          
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: A0A7S2FM28_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM28_9STRA)

HSP 1 Score: 178 bits (451), Expect = 6.630e-54
Identity = 77/173 (44.51%), Postives = 120/173 (69.36%), Query Frame = 0
Query:    1 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 173
            MPAYHSK  D      CGC +LP+ TTVRG AP  +   EDI++E L +FRAN+ FRN++++G ADRTL+YL+ ++ Q LKEL++   K +A++ L  L +++F  PG+ GW LG +FP  TS  + + F+ Y +QC+ E+ +R+ + +Y+ + +++K W +F+KRKFMGK +
Sbjct:   13 MPAYHSKNNDYQGNEACGCLMLPIKTTVRGTAPPCEADDEDIIDETLKFFRANIFFRNFEVKGGADRTLLYLSLYVAQVLKELDRQNDKTQAAKDLHALEIKSFPVPGEQGWTLGGMFPNPTSPADADAFRAYFKQCKVEIGRRVLEILYLPDGTKNKWWNMFAKRKFMGKTL 185          
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match: R1DRS6_EMIHU (Actin-related protein 2/3 complex subunit 3 n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRS6_EMIHU)

HSP 1 Score: 177 bits (449), Expect = 9.140e-54
Identity = 87/173 (50.29%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    1 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 173
            M  YHS       +V CGCAILPL T++RGPA  A  G EDIV+E L YF+ANVLF++++++G+ADRTLIYLT +  QCLK LE  P + +  +ALT LA + F+APG+  + L + FP G S  E +  + Y++Q REEL +RL  +VY +N   SK W+ FSKRKFM K +
Sbjct:    1 MVVYHSSLNGTETEVACGCAILPLKTSIRGPAESAAEGEEDIVDETLGYFKANVLFKHFEVKGAADRTLIYLTLYTTQCLKRLETCPTQTDGVKALTALAHEAFSAPGEPRFALASFFPAGASPAELDLCRAYLKQAREELGRRLALKVYGDNGPPSKLWIAFSKRKFMNKAL 173          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G978_ECTSI5.870e-8899.21Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A835YQX6_9STRA1.640e-6658.05Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S1U2P7_9STRA7.700e-6053.76Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2RMH4_9STRA1.920e-5850.87Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S0Q1V8_9EUKA8.980e-5548.54Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A0M0JZA5_9EUKA9.960e-5553.25Actin-related protein 2 3 complex subunit 3 (Fragm... [more]
A0A8J6CIQ6_DIALT1.200e-5448.28Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S4BNT7_CHRCT3.100e-5448.24Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S2FM28_9STRA6.630e-5444.51Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
R1DRS6_EMIHU9.140e-5450.29Actin-related protein 2/3 complex subunit 3 n=3 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007204Actin-related protein 2/3 complex subunit 3PFAMPF04062P21-Arccoord: 1..172
e-value: 2.5E-66
score: 223.0
IPR007204Actin-related protein 2/3 complex subunit 3PIRSFPIRSF016315p21-ARCcoord: 1..173
e-value: 1.0E-61
score: 205.2
IPR007204Actin-related protein 2/3 complex subunit 3PANTHERPTHR12391ARP2/3 COMPLEX 21 KD SUBUNITcoord: 1..173
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilyGENE3D1.10.1760.10coord: 1..174
e-value: 8.7E-69
score: 232.8
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilySUPERFAMILY69060Arp2/3 complex 21 kDa subunit ARPC3coord: 2..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:469627..473718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.864.1mRNA_Ecto-sp6_S_contig102.864.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig102 469580..473847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig102.864.1 ID=prot_Ecto-sp6_S_contig102.864.1|Name=mRNA_Ecto-sp6_S_contig102.864.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=175bp
MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYF
RANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLA
MQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVY
VENESRSKHWMLFSKRKFMGKEML*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007204ARPC3
IPR036753ARPC3_sf