prot_Ecto-sp6_S_contig102.833.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig102.833.1
Unique Nameprot_Ecto-sp6_S_contig102.833.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length318
Homology
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BLAST of mRNA_Ecto-sp6_S_contig102.833.1 vs. uniprot
Match: D7FZ82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ82_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 7.440e-104
Identity = 223/317 (70.35%), Postives = 241/317 (76.03%), Query Frame = 0 
Query:    1 MTTCSNTDSFRLEADIDYIYDDYGEVESPDGCYEEPVYDPVESGEAASEFYSNGIRSDYEYFFKMYVYQDAELAEVWGIATYVEGITNTRCIDYYLNEYTTLHPTEVIYWACEDDDGGFSYKTLSATISTVCGCDTPAPTAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAAASAPAXXXXXXXXXXXXXXXXXXDGLTLAPRTLTYTFSPTRAPEVASSPPPVSTTSDEAAPAGEVAXXXXXXXXXXXXXXLAALFKTGRLKIKRTGKQRKPSHDDVASGSGSTGSTPPAASXXXXXXXXXXXXXXXEAIE 317
            MT+CS TDSFRLEADIDY+++DYGEV SPDGCY+E +  PVESGEA S FYS+G  SDYEYFF+ Y + D E   VW IATY++   NTRCIDY LN+YTTLHPTEV+YWACEDDDGG  Y   SATIST+CGC+TPAPTAAPTXXXXXXXXXXXXXXXXX                                       +GL    RTL  T SPTRAPEV S+PPPVSTTSDEAAPAGEVA XXXXXXXXXXXXXLAALFKTGRLKIKRTGKQRKPSHDDVASGSGS G+TPPAAS XXXXXXXXXXXXXXEAIE
Sbjct:    1 MTSCSYTDSFRLEADIDYVFEDYGEVSSPDGCYQESINSPVESGEAVSAFYSDGGLSDYEYFFRTYEFDDDE---VWVIATYLDDTFNTRCIDYDLNDYTTLHPTEVLYWACEDDDGG--YTDFSATISTICGCNTPAPTAAPTXXXXXXXXXXXXXXXXXGPTP-----------------------------------NGLXXXXRTLMDTSSPTRAPEVVSTPPPVSTTSDEAAPAGEVAGXXXXXXXXXXXXXLAALFKTGRLKIKRTGKQRKPSHDDVASGSGSMGNTPPAASEXXXXXXXXXXXXXXEAIE 277
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ82_ECTSI7.440e-10470.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 263..317
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..262
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..241
NoneNo IPR availableTMHMMTMhelixcoord: 240..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:85450..87945 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.833.1mRNA_Ecto-sp6_S_contig102.833.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig102 85450..87945 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig102.833.1 ID=prot_Ecto-sp6_S_contig102.833.1|Name=mRNA_Ecto-sp6_S_contig102.833.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=318bp
MTTCSNTDSFRLEADIDYIYDDYGEVESPDGCYEEPVYDPVESGEAASEF
YSNGIRSDYEYFFKMYVYQDAELAEVWGIATYVEGITNTRCIDYYLNEYT
TLHPTEVIYWACEDDDGGFSYKTLSATISTVCGCDTPAPTAAPTTPPPTP
GPATPDPSAARATPDPTAAPTTPLPAAASAPAPSAVSSTPAPAAAPGPTP
DGLTLAPRTLTYTFSPTRAPEVASSPPPVSTTSDEAAPAGEVAGGVVAGV
VVVVAVVLAALFKTGRLKIKRTGKQRKPSHDDVASGSGSTGSTPPAASEP
PVHHQYPVAYQYPEAIE*
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