prot_Ecto-sp6_S_contig101.817.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig101.817.1
Unique Nameprot_Ecto-sp6_S_contig101.817.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length534
Homology
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BLAST of mRNA_Ecto-sp6_S_contig101.817.1 vs. uniprot
Match: A0A6H5JP88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP88_9PHAE)

HSP 1 Score: 673 bits (1737), Expect = 5.280e-238
Identity = 411/521 (78.89%), Postives = 422/521 (81.00%), Query Frame = 0 
Query:    1 MSPPYRLPQWPPRSSAPQDPQHFKPRGGGNYYDNGSDPSHQLDDD-ATNLVTGGRDSRQQQQQCRPADDLPDESFLGVPIFRGDVVLEAEEDGGGTCSNLELSLLDDDHAAAASTTMPGGERVSPRWNSGNRAEQRATTTEPVASARQAISSSTPLRVRFAPDVGDEGTALRAAAEASPSPPPPLAARADRRGEENEDVSASGSSCFVRHRNGMHTAWRRKAAVPDNPRQPLQATVAAAPAEPPNXXXXXXXXXXXXXXKRDPVAPIRRKGVMSADQLIAQSMSSTQQQQQPVRLFLRRSRPPVSPEPAGKENVRAVAVLRETKGSIVGARRVNGSQQAFPLPWGGTHSPVTGVQLNRARPDGGGWGGREALLEVLXXXXXXRARPRSAQHVARSPPLTTRTSPGISTRXXXXXXXXXXXXXXXXXPSTPVAASA----APLSSVAIRENLARVARTSKVGTKADPVHLYRQRQELEQARTKKAAAVARSRRKPTNREGRLAGGCSAWGTGTAGGWVGVNS 516
            MSPPYRLPQWPP+SSAPQDPQHF P   G+YYDNGSDPS QLDDD  T LV  GRDS +QQ QCRPADDL DESFLGVPIFRGDVV + EEDGGG  SNLELS LDDDHAAAASTTMPGGER SP WNSGNRAEQRATTTEPV S   A+SSSTP+RVRFAPDVGD GTAL  AAEASPS     AARADRRG+ENE V ASGSSCFVRHRNGMHTAWRRKA VPDNPRQPLQ TVAAA AEPPN    XXXXXXXXXX                                PVRLFLRRSR PVSPEPAGKENVR  AVL+ETKGS+ GARR NGSQQAFPLPWGGTHSPVTG+QLNRARPDGGGWGGREALLEVL XXXXXRARPRSAQHVARSPPLTTR SP ISTRXXXXXXXXXXXXXXXXX             APLSSVAIRENLARVARTSKVGTKADPVHLYRQRQELEQARTKKAA VARSRRKPT+REGR  GG S WGTGTAGGWVGVNS
Sbjct:    1 MSPPYRLPQWPPQSSAPQDPQHFNPPRRGDYYDNGSDPSRQLDDDDVTTLVADGRDSWKQQ-QCRPADDLADESFLGVPIFRGDVVRDTEEDGGG--SNLELSFLDDDHAAAASTTMPGGERASPTWNSGNRAEQRATTTEPVVSVGPAVSSSTPMRVRFAPDVGDGGTALLEAAEASPSXXXXXAARADRRGDENEHVFASGSSCFVRHRNGMHTAWRRKAVVPDNPRQPLQVTVAAARAEPPNGVIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVRLFLRRSRLPVSPEPAGKENVRPAAVLKETKGSVAGARRANGSQQAFPLPWGGTHSPVTGMQLNRARPDGGGWGGREALLEVLTXXXXXRARPRSAQHVARSPPLTTRISPSISTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSSVAIRENLARVARTSKVGTKADPVHLYRQRQELEQARTKKAAGVARSRRKPTSREGRPTGGISVWGTGTAGGWVGVNS 518
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JP88_9PHAE5.280e-23878.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 533..533

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig101contigEcto-sp6_S_contig101:522175..523776 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig101.817.1mRNA_Ecto-sp6_S_contig101.817.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig101 522175..523776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig101.817.1 ID=prot_Ecto-sp6_S_contig101.817.1|Name=mRNA_Ecto-sp6_S_contig101.817.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=534bp
MSPPYRLPQWPPRSSAPQDPQHFKPRGGGNYYDNGSDPSHQLDDDATNLV
TGGRDSRQQQQQCRPADDLPDESFLGVPIFRGDVVLEAEEDGGGTCSNLE
LSLLDDDHAAAASTTMPGGERVSPRWNSGNRAEQRATTTEPVASARQAIS
SSTPLRVRFAPDVGDEGTALRAAAEASPSPPPPLAARADRRGEENEDVSA
SGSSCFVRHRNGMHTAWRRKAAVPDNPRQPLQATVAAAPAEPPNGAVGGN
NNSNNNTSKRDPVAPIRRKGVMSADQLIAQSMSSTQQQQQPVRLFLRRSR
PPVSPEPAGKENVRAVAVLRETKGSIVGARRVNGSQQAFPLPWGGTHSPV
TGVQLNRARPDGGGWGGREALLEVLTTPPPPRARPRSAQHVARSPPLTTR
TSPGISTRRAVVVVDDNTPPPRRRTPSTPVAASAAPLSSVAIRENLARVA
RTSKVGTKADPVHLYRQRQELEQARTKKAAAVARSRRKPTNREGRLAGGC
SAWGTGTAGGWVGVNSGGGRVGGGGGSGRVGLR*
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