prot_Ecto-sp6_S_contig100.761.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig100.761.1
Unique Name	prot_Ecto-sp6_S_contig100.761.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	261

Homology

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A6H5LDQ8_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDQ8_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 3.600e-142
Identity = 210/219 (95.89%), Postives = 212/219 (96.80%), Query Frame = 0

Query:    6 GYEQRHPGDGTMEEPATDSQAQVSRGDRDPEKGPESADGNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 224
            GYEQRHPGDGTMEEPATD QAQVSRGD D EKGPESAD N+QVD RQPLNYKPLSHRKLKDYNEGLAKRGVVYLSR+PPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKK GGNSGKRY EGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER
Sbjct:   35 GYEQRHPGDGTMEEPATDPQAQVSRGDLDSEKGPESADDNDQVDTRQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKGGGNSGKRYAEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 253

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: D7FRL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL0_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 9.440e-80
Identity = 125/137 (91.24%), Postives = 128/137 (93.43%), Query Frame = 0

Query:   17 MEEPATDSQAQVSRGDRDPEKGPESADGNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLI 153
            MEEPATD QAQVSRGDRDPEKGPESAD NEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSR+PPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIAR  + S    L+
Sbjct:    1 MEEPATDPQAQVSRGDRDPEKGPESADDNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARGQSFSSAEKLL 137

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A2D4BVT2_PYTIN (Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVT2_PYTIN)

HSP 1 Score: 224 bits (570), Expect = 1.030e-69
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = 0

Query:   59 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 224
            LS +KL++Y E  AKRGVVY+SR+PPFMKP K+KHL+ Q+G + RVYLV ED+A ++ R  AGGN   +YTEGW+EFEDKK+A++ A  LN   IGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KMEER
Sbjct:   30 LSTKKLEEYRERAAKRGVVYISRVPPFMKPEKLKHLLGQYGAINRVYLVPEDKAQQKRRVAAGGNRKTKYTEGWIEFEDKKVAKSVAAMLNTKQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIREQKLRMEIAQAKKENDAYLERVEQSKQFQKMEER 195

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A5D6Y296_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y296_9STRA)

HSP 1 Score: 214 bits (546), Expect = 3.300e-66
Identity = 105/166 (63.25%), Postives = 126/166 (75.90%), Query Frame = 0

Query:   59 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 224
            LS  KL+ + +   KRGVVYLSR+PPFMKP KVKHL+ Q G + R+YLV ED+ N + R  AGGN  + YTEGW+EFEDKK+AR  A  LN   IGGRKR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLRLE  QAK+EN  Y++ VE  + F KMEER
Sbjct:   22 LSREKLEAFKKRADKRGVVYLSRVPPFMKPEKVKHLLGQFGDINRIYLVPEDKTNHKKRVAAGGNRKQSYTEGWIEFEDKKVARQVAAVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRLEIAQAKKENEAYLDKVEQSKQFEKMEER 187

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A8K1FEZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ1_PYTOL)

HSP 1 Score: 213 bits (543), Expect = 1.210e-65
Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = 0

Query:   59 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 224
            LS  KL +Y E +AKRGVVY+SR+PP+MKP K+KHL+ ++G + R+YLV ED+  ++ R  AGGN   +YTEGWVEFE+KK+A+  A  LN   IGGRKR+YYHDD+WNLKYL+ FKW+HLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KMEER
Sbjct:   30 LSKAKLDEYRERVAKRGVVYISRVPPYMKPEKLKHLLSKYGDINRIYLVPEDKVQQKKRVAAGGNRKTKYTEGWVEFENKKVAKTVATMLNTKQIGGRKRDYYHDDIWNLKYLKGFKWEHLTEKIAYENRIRDQKLRMEIAQAKKENDAYLERVEQSKQFTKMEER 195

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: K3WDP5_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDP5_GLOUD)

HSP 1 Score: 213 bits (543), Expect = 1.810e-65
Identity = 104/178 (58.43%), Postives = 133/178 (74.72%), Query Frame = 0

Query:   49 DARQPLNYKPL--SHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 224
            DA++P     L  S  K++ + +   KRGVVY+SR+PPFMKP KVKHL+ Q+G + R+YLV ED+ + + R  AGGN  + YTEGW+EFEDKK+A+  A+ LN   IGGRKR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KMEER
Sbjct:   24 DAKKPAKRSKLDLSREKMEQFKKKAEKRGVVYISRVPPFMKPEKVKHLLGQYGDINRIYLVPEDKTHHKKRVAAGGNRKQSYTEGWIEFEDKKVAKQVAKVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLEKVEQSKKFEKMEER 201

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A7S1TZ85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ85_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.520e-64
Identity = 99/168 (58.93%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   57 KPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 224
            K L    L +YN  +A+RGV+YLSRIPPFMKP KV+HL+  HG VTRV+L  ED++NR+AR+++GG+  KRY EGWVEF +KK+A+  A SLNNT IGG +R+YYH+D+WN+KYL+ FKWDHLTEK+AYERRVR  ++R E +QA+RENA  ++L + G++   ME R
Sbjct:   35 KTLDAAALAEYNAKMARRGVLYLSRIPPFMKPQKVRHLLAVHGEVTRVFLAAEDRSNRKARRRSGGSKAKRYDEGWVEFAEKKVAKRVALSLNNTKIGGSRRSYYHEDIWNIKYLKGFKWDHLTEKLAYERRVREHRMRAEMLQARRENAMLLDLADQGKALRAMEGR 202

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: H3HB09_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB09_PHYRM)

HSP 1 Score: 209 bits (533), Expect = 3.670e-64
Identity = 97/166 (58.43%), Postives = 130/166 (78.31%), Query Frame = 0

Query:   59 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 224
            LS  K++ + E   +RGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED++  + R  AGGN  ++YTEGW+EFEDKK+A+  A+ LN TLIGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E V+  + F KM+ R
Sbjct:   21 LSREKMEQFKEMAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKSLHKKRVSAGGNRRQKYTEGWLEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMDAR 186

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A3R7J166_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J166_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.450e-64
Identity = 100/183 (54.64%), Postives = 133/183 (72.68%), Query Frame = 0

Query:   45 NEQVDARQPLNYKPL---SHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 224
            N +  + +P  +KPL   S  K++ + +   KRGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED+   + R  AGGN    YTEGW+EFEDKKIA+  A+ LN T IGGRKR+YYHDDMWN KYL+ FKWDHLTEK+AYE R+R QKLR+E  Q+K+EN  Y+E V+  + F KME R
Sbjct:    3 NMEASSSKPATHKPLEGLSREKMEQFKQKAEKRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRTNYTEGWIEFEDKKIAKRVAKMLNTTQIGGRKRDYYHDDMWNFKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQSKKENEAYLERVDQSKQFEKMEAR 185

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: D0MVG4_PHYIT (Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVG4_PHYIT)

HSP 1 Score: 209 bits (531), Expect = 6.910e-64
Identity = 97/166 (58.43%), Postives = 129/166 (77.71%), Query Frame = 0

Query:   59 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 224
            LS  K++ + E   +RGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED+A  + R  +GGN  ++YTEGW+EFE+KK+A+  A+ LN T IGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KME R
Sbjct:   21 LSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFENKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEAR 186

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LDQ8_9PHAE	3.600e-142	95.89	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FRL0_ECTSI	9.440e-80	91.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A2D4BVT2_PYTIN	1.030e-69	64.46	Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium i...	[more]
A0A5D6Y296_9STRA	3.300e-66	63.25	RRM domain-containing protein n=1 Tax=Pythium bras...	[more]
A0A8K1FEZ1_PYTOL	1.210e-65	60.84	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3WDP5_GLOUD	1.810e-65	58.43	RRM domain-containing protein n=1 Tax=Globisporang...	[more]
A0A7S1TZ85_9STRA	2.520e-64	58.93	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
H3HB09_PHYRM	3.670e-64	58.43	RRM domain-containing protein n=1 Tax=Phytophthora...	[more]
A0A3R7J166_9STRA	4.450e-64	54.64	RRM domain-containing protein n=2 Tax=Phytophthora...	[more]
D0MVG4_PHYIT	6.910e-64	58.43	Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophth...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 182..202
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 7..160 e-value: 5.1E-9 score: 38.2
IPR039119	ABT1/Esf2	PANTHER	PTHR12311	FAMILY NOT NAMED	coord: 8..232
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 75..157 score: 8.979
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 69..157

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig100	contig	Ecto-sp6_S_contig100:579672..587034 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig100.761.1	mRNA_Ecto-sp6_S_contig100.761.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig100 579672..587036 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig100.761.1 ID=prot_Ecto-sp6_S_contig100.761.1|Name=mRNA_Ecto-sp6_S_contig100.761.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=261bp
PRESGGYEQRHPGDGTMEEPATDSQAQVSRGDRDPEKGPESADGNEQVDA
RQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGV
VTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNN
TLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQ
AKRENARYVELVESGRSFAKMEERKRKRRQDGGDDNNAASVAPTIGGGSP
AAAAAAAATKS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR039119	ABT1/Esf2
IPR000504	RRM_dom
IPR035979	RBD_domain_sf