prot_Ecto-sp6_S_contig100.759.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig100.759.1
Unique Name	prot_Ecto-sp6_S_contig100.759.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	216

Homology

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BLAST of mRNA_Ecto-sp6_S_contig100.759.1 vs. uniprot
Match: D7FRL3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRL3_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 8.210e-112
Identity = 190/193 (98.45%), Postives = 191/193 (98.96%), Query Frame = 0

Query:   24 MFPDEYGNFNVPNGASLSKKVLLERVKRLKSELALLKDIKEDGDARLKAQELDFARRNKEIQAQKEENERQLQMNDKALSDAALGVRTRDRQIINLGDKICRGRMAMQQLQKDKHQVVDRAKREAREEMNAERQXXXXXXXXX-QPSQGMQIKSIGHGSGGAGPHFTRASTGGGMGANPVRVFKAPGGGRAGK 215
            MFPDEYGNFNVPNGASLSKKVLLERVKRLKSELALLK+IKEDGDARLKAQELDFARRNKEIQAQKEENERQLQMNDKALSDAALGVRTRDRQIINLG KICRGRMAMQQLQKDKHQVVDRAKREAREEMNAERQXXXXXXXXX QPSQGMQIKSIGHGSGGAGPHFTRASTGGGMGANPVRVFKAPGGGRAGK
Sbjct:    1 MFPDEYGNFNVPNGASLSKKVLLERVKRLKSELALLKEIKEDGDARLKAQELDFARRNKEIQAQKEENERQLQMNDKALSDAALGVRTRDRQIINLGGKICRGRMAMQQLQKDKHQVVDRAKREAREEMNAERQXXXXXXXXXXQPSQGMQIKSIGHGSGGAGPHFTRASTGGGMGANPVRVFKAPGGGRAGK 193

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig100.759.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig100.759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1

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POSITION

0


Match Name	E-value	Identity	Description
D7FRL3_ECTSI	8.210e-112	98.45	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

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x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..99
None	No IPR available	COILS	Coil	Coil	coord: 130..165
None	No IPR available	COILS	Coil	Coil	coord: 42..62

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig100	contig	Ecto-sp6_S_contig100:559632..562287 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig100.759.1	mRNA_Ecto-sp6_S_contig100.759.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig100 558615..562480 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig100.759.1 ID=prot_Ecto-sp6_S_contig100.759.1|Name=mRNA_Ecto-sp6_S_contig100.759.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=216bp
MRDAHYRGVPALGGPMSSTDPQRMFPDEYGNFNVPNGASLSKKVLLERVK
RLKSELALLKDIKEDGDARLKAQELDFARRNKEIQAQKEENERQLQMNDK
ALSDAALGVRTRDRQIINLGDKICRGRMAMQQLQKDKHQVVDRAKREARE
EMNAERQQQQQKKKKQQPSQGMQIKSIGHGSGGAGPHFTRASTGGGMGAN
PVRVFKAPGGGRAGK*