Homology
BLAST of mRNA_Ecto-sp6_S_contig100.737.1 vs. uniprot
Match:
D7FRN3_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN3_ECTSI)
HSP 1 Score: 1119 bits (2894), Expect = 0.000e+0
Identity = 601/634 (94.79%), Postives = 604/634 (95.27%), Query Frame = 0
Query: 136 MVRLPNTATFGELLACAREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLGANVTLKECCVSGVPVGGFSPKGWGELRLELHVAECTTRNSLQQVAMRDSSQGWSASEFRGAVGVGLPSRGTDVLWSPSQPSHLTPSPPVAATYVPQNNEGSSLTTPSSLLRNGASTVETRPAVVEHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGARSGDTLIVGYRVGPGAPPEVMRAVVELEGNAAGDDDAQTADAAISPTHSPSHHRPCGAQRGTVDSSGSSNVDGGIPDQGTSGVESAAVVADGDENNDVVAPXXXXXXXXXXXSGMDVDEPAGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNASGAMSSPPSEARSGSEKSGGQRAWWAKRMATRSLKGSRSSNEQGWGATGAAAALRGAVGASPLSASTPSADSTNNSADTRRVRVSPAPAVPFRQNATHGVDRVGWRILRGIGAGGASSVYDSPLSSAAARRQQRFIPSVGRPKLKVWARWKYGRRVPTPPVPPAGDGGGRG 769
MVRLPNTATFGELLA AREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLGANVTLKECCV GVPVGGFSPKGWGELRLELHVAECTTRNSLQ VAMRDSSQGWSASEFRGAVGVGLPSRGTDVL SPSQPSHLTPSPPVAATYVPQNNEGSSLTTPSSL RNGASTVETRP V EHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGAR GDTLIVGYRVGPGAPPEVMR VVELEGNAAGDDDAQ ADAAISPTHSPSHHRPCGAQRGTVDSSGSSN+DGGIP+QGTSGVESAA VADGDENNDVVAPXXXXXXXXXXXSGMDVDEPAGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNASGA SSPPSEARSGSEKSGGQRAWWAKRMATRSLKGSRSSNEQGWGATGA AALR VGAS LSASTPSADSTNNSADTRRVRVSP PAVP QNATHGVDR G RILRGIGAGGASS+YDSP QQRFIPSVGRPKLKVWARWKYGRRVPTPPVP AGDGGGRG
Sbjct: 1 MVRLPNTATFGELLARAREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLGANVTLKECCVWGVPVGGFSPKGWGELRLELHVAECTTRNSLQ-VAMRDSSQGWSASEFRGAVGVGLPSRGTDVLRSPSQPSHLTPSPPVAATYVPQNNEGSSLTTPSSLHRNGASTVETRPTV-EHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGARGGDTLIVGYRVGPGAPPEVMRPVVELEGNAAGDDDAQNADAAISPTHSPSHHRPCGAQRGTVDSSGSSNIDGGIPEQGTSGVESAAAVADGDENNDVVAPXXXXXXXXXXXSGMDVDEPAGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNASGATSSPPSEARSGSEKSGGQRAWWAKRMATRSLKGSRSSNEQGWGATGATAALRXXVGASSLSASTPSADSTNNSADTRRVRVSPTPAVPVHQNATHGVDRAGVRILRGIGAGGASSMYDSPXXXXXXXXQQRFIPSVGRPKLKVWARWKYGRRVPTPPVPHAGDGGGRG 632
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.737.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M A G D G F V V I V A L E P R P L P S L G L D E R F T R I D Y T A T C T M L D V L E D M A R V L R V P T G D L T L L E S A G L E A V D L T N T L S E Y H G Q H T A P C S S V F A G K R H Q W P R Y V K R Q R K E I N L K V K H T P V P H Q L V T C T V E G G K G R N V L R R A M V R L P N T A T F G E L L A C A R E K R H G A L E L E G P V Y G R D G E L D T T L R D G W V R N S C K V D G T L H I G L A V V V S F P R G S Q R S L S L T M G P G A T I G D V K Q R I C V D H G I V P S R Q G L M I C G G A Q R L G A N V T L K E C C V S G V P V G G F S P K G W G E L R L E L H V A E C T T R N S L Q Q V A M R D S S Q G W S A S E F R G A V G V G L P S R G T D V L W S P S Q P S H L T P S P P V A A T Y V P Q N N E G S S L T T P S S L L R N G A S T V E T R P A V V E H G S G P Y S T V M F A L S P S G R A L T L T M A P T A T V L D A K T Q V A A F E G V S P C R Q R L L W R G I L M E P D G A L L R R L G A R S G D T L I V G Y R V G P G A P P E V M R A V V E L E G N A A G D D D A Q T A D A A I S P T H S P S H H R P C G A Q R G T V D S S G S S N V D G G I P D Q G T S G V E S A A V V A D G D E N N D V V A P D G G G G D G G G G G S G M D V D E P A G A W V N V V R N G G V D V V D G A Q R G S G S G E A E Q D G N A S G A M S S P P S E A R S G S E K S G G Q R A W W A K R M A T R S L K G S R S S N E Q G W G A T G A A A A L R G A V G A S P L S A S T P S A D S T N N S A D T R R V R V S P A P A V P F R Q N A T H G V D R V G W R I L R G I G A G G A S S V Y D S P L S S A A A R R Q Q R F I P S V G R P K L K V W A R W K Y G R R V P T P P V P P A G D G G G R G * 100 200 300 400 500 600 700 Expect = 0.00e+0 / Id = 94.79 Sequence D7FRN3_ECTSI
Match Name E-value Identity Description
D7FRN3_ECTSI 0.000e+0 94.79 Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M A G D G F V V I V A L E P R P L P S L G L D E R F T R I D Y T A T C T M L D V L E D M A R V L R V P T G D L T L L E S A G L E A V D L T N T L S E Y H G Q H T A P C S S V F A G K R H Q W P R Y V K R Q R K E I N L K V K H T P V P H Q L V T C T V E G G K G R N V L R R A M V R L P N T A T F G E L L A C A R E K R H G A L E L E G P V Y G R D G E L D T T L R D G W V R N S C K V D G T L H I G L A V V V S F P R G S Q R S L S L T M G P G A T I G D V K Q R I C V D H G I V P S R Q G L M I C G G A Q R L G A N V T L K E C C V S G V P V G G F S P K G W G E L R L E L H V A E C T T R N S L Q Q V A M R D S S Q G W S A S E F R G A V G V G L P S R G T D V L W S P S Q P S H L T P S P P V A A T Y V P Q N N E G S S L T T P S S L L R N G A S T V E T R P A V V E H G S G P Y S T V M F A L S P S G R A L T L T M A P T A T V L D A K T Q V A A F E G V S P C R Q R L L W R G I L M E P D G A L L R R L G A R S G D T L I V G Y R V G P G A P P E V M R A V V E L E G N A A G D D D A Q T A D A A I S P T H S P S H H R P C G A Q R G T V D S S G S S N V D G G I P D Q G T S G V E S A A V V A D G D E N N D V V A P D G G G G D G G G G G S G M D V D E P A G A W V N V V R N G G V D V V D G A Q R G S G S G E A E Q D G N A S G A M S S P P S E A R S G S E K S G G Q R A W W A K R M A T R S L K G S R S S N E Q G W G A T G A A A A L R G A V G A S P L S A S T P S A D S T N N S A D T R R V R V S P A P A V P F R Q N A T H G V D R V G W R I L R G I G A G G A S S V Y D S P L S S A A A R R Q Q R F I P S V G R P K L K V W A R W K Y G R R V P T P P V P P A G D G G G R G * 100 200 300 400 500 600 700 Expect = 4.5E-5 / Score = 25.1 Expect = 1.6E-8 / Score = 36.2 Expect = 8.1E-8 / Score = 31.9 Score = 11.333 Score = Sequence G3DSA:3.10.20.90 PF00240 PS50053 SSF54236
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available GENE3D 3.10.20.90 coord: 196..263 IPR000626 Ubiquitin domain PFAM PF00240 ubiquitin coord: 391..451 IPR000626 Ubiquitin domain PROSITE PS50053 UBIQUITIN_2 coord: 391..459 IPR029071 Ubiquitin-like domain superfamily SUPERFAMILY 54236 Ubiquitin-like coord: 381..460
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp6_S_contig100.737.1 ID=prot_Ecto-sp6_S_contig100.737.1|Name=mRNA_Ecto-sp6_S_contig100.737.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=770bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: