Homology
BLAST of mRNA_Ecto-sp6_S_contig100.686.1 vs. uniprot
Match:
D7FKI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI6_ECTSI)
HSP 1 Score: 167 bits (423), Expect = 1.800e-52
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0
Query: 1 MMPSMINLLVLLAAVLQMMGAAAEDFEVSTGVGSIRAQDRDPFKEGYFNMIISCFALMFFFIGCMFSVRICLGNKRGNDSHSFFLVA 87
MMPSMINLLVLLAAVL MMGAAAEDFEVSTGVGSIRAQDRDPFKEGYFNMIISCFALMFFFIGCMFSVRICLG KRGNDSHSFFLVA
Sbjct: 1 MMPSMINLLVLLAAVLHMMGAAAEDFEVSTGVGSIRAQDRDPFKEGYFNMIISCFALMFFFIGCMFSVRICLGKKRGNDSHSFFLVA 87
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.686.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M M P S M I N L L V L L A A V L Q M M G A A A E D F E V S T G V G S I R A Q D R D P F K E G Y F N M I I S C F A L M F F F I G C M F S V R I C L G N K R G N D S H S F F L V A * 10 20 30 40 50 60 70 80 Expect = 1.80e-52 / Id = 97.70 Sequence D7FKI6_ECTSI
Match Name E-value Identity Description
D7FKI6_ECTSI 1.800e-52 97.70 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M M P S M I N L L V L L A A V L Q M M G A A A E D F E V S T G V G S I R A Q D R D P F K E G Y F N M I I S C F A L M F F F I G C M F S V R I C L G N K R G N D S H S F F L V A * 10 20 30 40 50 60 70 80 Score = Score = Score = Score = Score = Score = Score = Score = 0.885 Score = Score = Sequence NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_H_REGION CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_N_REGION TRANSMEMBRANE SIGNAL_PEPTIDE SignalP-TM TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 24..46 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 8..16 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 73..87 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 17..23 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..7 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 47..72 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..23 None No IPR available SIGNALP_EUK SignalP-TM SignalP-TM coord: 1..23 None No IPR available TMHMM TMhelix coord: 7..26 None No IPR available TMHMM TMhelix coord: 46..68
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp6_S_contig100.686.1 ID=prot_Ecto-sp6_S_contig100.686.1|Name=mRNA_Ecto-sp6_S_contig100.686.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=88bp back to top