prot_Ecto-sp6_S_contig10.670.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig10.670.1
Unique Name	prot_Ecto-sp6_S_contig10.670.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	389

Homology

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BLAST of mRNA_Ecto-sp6_S_contig10.670.1 vs. uniprot
Match: D7G8X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X3_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 1.500e-115
Identity = 305/408 (74.75%), Postives = 311/408 (76.23%), Query Frame = 0

Query:    1 MKLEPRPPALRHFLAPWPTESTASSSTAATRLVGGRRNREGQHQQEQARGEDGASWTGTRTTXXXXXXXXXXXXXXXXXWXXXXXSDARREGQ-RQQLLRGVAAGGLPVTLDRPPHNDRSRGSTTTIRQVEVAAATGEEQSAVPLPRDFRLWAFLALVGVLEACATLRALGVMALSLPVTLVXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRDRRPPQVDADSGGDRRRTTAVPFGRRPWQPHLPGGDAAAA-------------------AAGVGLGGLCGXXXXXXXXXXXXXXAAADVGLGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSPARPPIGRRGGGIVNDLGLGLGASSSPATAVGGVRAVAAGVPGGIAQELQME 388
            MKLEPRPPALRHFLAPWPTESTASSSTAATRLVGGRRNREGQHQQEQARGED ASW GTR  XXXXXXXXXXXXXXXXX XXXXX         RQQ LRGVAAGGLPVTLDRPPHNDRSRGSTTTIRQV VAAAT E QSAVPLPR+FRLWAFL L+GVLEACA LRALGV ALSLPVTLV XXXXXXXXXXXXXXXXXXXXXXXXXXRQRDRRPPQVDADSG DRRR TAVPFGRRPW+P+L GG AAA                    AA VGLGG   XXXXXXXXXXXXXX        G  XXXXXXXXXXXXX                                 RRSPARPP+GRRG   VNDLG+GL ASSSPATAVGGVRAVAAGVPGGIAQELQME
Sbjct:  443 MKLEPRPPALRHFLAPWPTESTASSSTAATRLVGGRRNREGQHQQEQARGEDEASWAGTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQQRLRGVAAGGLPVTLDRPPHNDRSRGSTTTIRQVGVAAATAEGQSAVPLPRNFRLWAFLTLLGVLEACAALRALGVTALSLPVTLVLXXXXXXXXXXXXXXXXXXXXXXXXXXRQRDRRPPQVDADSGDDRRRATAVPFGRRPWEPNLLGGVAAAXXXXXXXXXXXXXXXXXXXXAAAVGLGGXXXXXXXXXXXXXXXXXXGGSGARAGAPXXXXXXXXXXXXXTRRRSGGAASSGSPTRGRVPRRAR---------RRSPARPPMGRRGRECVNDLGIGLSASSSPATAVGGVRAVAAGVPGGIAQELQME 841

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BLAST of mRNA_Ecto-sp6_S_contig10.670.1 vs. uniprot
Match: A0A6H5JLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB3_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 3.940e-73
Identity = 272/454 (59.91%), Postives = 279/454 (61.45%), Query Frame = 0

Query:    1 MKLEPRPPALRHFLAPWPTESTASSSTAATRLVGGRRNREGQHQQEQARGEDGASWTGTRTTXXXXXXXXXXXXXXXXX--------WXXXXXSDARREGQRQQL-LRGVAAGGLPVTLDRPPHNDRSRGSTTTIRQVEVAAATGEEQSAVPLPRDFRLWAFLALVGVLEACATLRALGVMALSLPVTLVXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRDR---RPPQVDADSGGDRRRTTAVPFGRRPWQPHLPGGDAAAAAAGVGLGGLCGXXXXXXXXXXXXXXAAADVGLGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------RRSPARPPIGRRGGGIVNDLGLGLGASSSPATAVGGVRAVAAGVPGGIAQELQME 388
            MKLEPRPPALRHFLAPWPTESTASSSTAAT LVGG                           XXXXXXXXXXXXXXXXX        W     SDARR  QR+QL LRGVAA GLPVT DRPPHNDR+RGST T RQ  V AAT EE SAVPLPRD RLW FL LVGVLEACA +RALGV ALSLPVTLV                           +Q  R   RPPQ+DADSGG R R TA+ FGRRPWQPHL GG  AA            XXXXXXXXXXXXX AAA V     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                      R+SPARPPIG RG G VN LGLGLGASS PATAVGGVRAVAAGVPGGIAQELQME
Sbjct:  664 MKLEPRPPALRHFLAPWPTESTASSSTAATGLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFGGIWLTGGGSDARRRDQREQLRLRGVAAEGLPVTPDRPPHNDRTRGSTATTRQAGVEAATAEEHSAVPLPRDLRLWVFLTLVGVLEACAAVRALGVTALSLPVTLVLTAIAPAVAAVAFSVSSRSRSCPSRQGQQERRKLSRPPQLDADSGGVRGRATALSFGRRPWQPHLLGG-VAAXXXXXXXXXXXXXXXXXXXXXXXXXGAAATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGTPRRSGVVTSSSSPTRGRAPRGVRRKSPARPPIGHRGAGGVNALGLGLGASSFPATAVGGVRAVAAGVPGGIAQELQME 1116

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig10.670.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig10.670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G8X3_ECTSI	1.500e-115	74.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JLB3_9PHAE	3.940e-73	59.91	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 197..388
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 171..175
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 150..170
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..149
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 176..196

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig10	contig	Ecto-sp6_S_contig10:2623995..2625161 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig10.670.1	mRNA_Ecto-sp6_S_contig10.670.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig10 2622030..2625416 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig10.670.1 ID=prot_Ecto-sp6_S_contig10.670.1|Name=mRNA_Ecto-sp6_S_contig10.670.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=389bp
MKLEPRPPALRHFLAPWPTESTASSSTAATRLVGGRRNREGQHQQEQARG
EDGASWTGTRTTRNGGGGGGSKSASFGGTWLNGGGSDARREGQRQQLLRG
VAAGGLPVTLDRPPHNDRSRGSTTTIRQVEVAAATGEEQSAVPLPRDFRL
WAFLALVGVLEACATLRALGVMALSLPVTLVLTAIAPAVAAVVFSVSSHP
RSWPSPWPRQRDRRPPQVDADSGGDRRRTTAVPFGRRPWQPHLPGGDAAA
AAAGVGLGGLCGGGGSGGGGGAAAAGAAADVGLGGVDGGSGGGGAAAATA
AIGLGGRGGTRRRSGGVASSSSPTRGRVPRGGRRRSPARPPIGRRGGGIV
NDLGLGLGASSSPATAVGGVRAVAAGVPGGIAQELQME*