prot_Ecto-sp6_S_contig10.669.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig10.669.1
Unique Name	prot_Ecto-sp6_S_contig10.669.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	423

Homology

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.669.1 vs. uniprot
Match: D7G8X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X3_ECTSI)

HSP 1 Score: 636 bits (1641), Expect = 7.610e-221
Identity = 330/415 (79.52%), Postives = 334/415 (80.48%), Query Frame = 0

Query:    1 MHLGPEDLAIAAPAAFFPLFGDLNNPSASMDAVDPIFALVAVNPLLAAVVLPVYFALSVWSTHRVVDFLLTWSATQTAKRCDRWAQECEATPASSWWQRRVEPFIFPSQKHRSRFWKDVEKFEACPKYVQELRLIATPATSGGDATPTPARAFSSITNEHHNGKGDSRRCSVLLGTIRKGTARAWREIRASAKRVGAVAKCAWSETREKVYFAVLKKNGIERKVGGSSCSVVGGHSPAQPRKAPSDEDRVLAAHRALRGSDTTGAVRLAFGLNTVFFVVAGLRFYLRKSRGGRLRSREWHRHWRRWQQRGNGGNRTRVVVHGDADNXXXXXXXSTAGNSPLQSRDSVASTSWRLRAREPCLAWGDWDDAFLKIFLTEEARTSRHPVKWRRQVEESYHRAALPTLARQWNVPFLSK 415
            MHLGPEDLAIAAPAAFFPLFGDLNNPSASMDAVDPIFAL AVNPLLAAVVLPVYFALSVWSTHRVV FLLTWSATQTAKRCDRWAQECEATPASSWWQRRV PFIFPSQKHRSRF +DVEKFEACPKYVQELRLIATPAT+GGDATPTPARAFSSITNEHHNGKGDS RCSV LGTIRKGTARAWREIRA+AKRVGAVAKCAWSETREKVYFAVLKK GIERKVGGSSCSVVGGHSPAQPRKAPSDEDRVLAA R LRGSDTT AVRLAFGLNT                                                                 PLQSRDSVAS SWRLRAREPCLAW DWDD  LK+FL EEARTSRHPVKWRRQVEE YHRAALPTLARQWNVPFLSK
Sbjct:    1 MHLGPEDLAIAAPAAFFPLFGDLNNPSASMDAVDPIFALAAVNPLLAAVVLPVYFALSVWSTHRVVYFLLTWSATQTAKRCDRWAQECEATPASSWWQRRVVPFIFPSQKHRSRFCRDVEKFEACPKYVQELRLIATPATAGGDATPTPARAFSSITNEHHNGKGDSHRCSVFLGTIRKGTARAWREIRAAAKRVGAVAKCAWSETREKVYFAVLKKTGIERKVGGSSCSVVGGHSPAQPRKAPSDEDRVLAAQRTLRGSDTTSAVRLAFGLNT-----------------------------------------------------------------PLQSRDSVASPSWRLRAREPCLAWRDWDDLSLKVFLAEEARTSRHPVKWRRQVEEFYHRAALPTLARQWNVPFLSK 350

[Close]

BLAST of mRNA_Ecto-sp6_S_contig10.669.1 vs. uniprot
Match: A0A6H5JLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB3_9PHAE)

HSP 1 Score: 502 bits (1292), Expect = 4.730e-165
Identity = 273/412 (66.26%), Postives = 287/412 (69.66%), Query Frame = 0

Query:    6 EDLAIAAPAAFFPLF--GDLNNPSASMDAVDPIFALVAVNPLLAAVVLPVYFALSVWSTHRVVDFLLTWSATQTAKRCDRWAQECEATPASSWWQRRVEPFIFPSQKHRSRFWKDVEKFEACPKYVQELRLIATPATSGGDATPTPARAFSSITNEHHNGKGDSRRCSVLLGTIRKGTARAWREIRASAKRVGAVAKCAWSETREKVYFAVLKKNGIERKVGGSSCSVVGGHSPAQPRKAPSDEDRVLAAHRALRGSDTTGAVRLAFGLNTVFFVVAGLRFYLRKSRGGRLRSREWHRHWRRWQQRGNGGNRTRVVVHGDADNXXXXXXXSTAGNSPLQSRDSVASTSWRLRAREPCLAWGDWDDAFLKIFLTEEARTSRHPVKWRRQVEESYHRAALPTLARQWNVPFLSK 415
            E +A++A  A  PL   GDLNNP  SMD VDPIFALVAVNPLLAAV LPVYFALSVWSTHRV  FLLTWSATQTAKRCDRW QECE T ASSWWQRRV P IFPSQ HRSRF +D +KFEACPKYVQELRLIA PA  GGDATPTPARAFSSITNEHH+GKG+  RCSV LGTIR+G ARAWRE+RA+AK VGAVAKCAWSE REK Y AVLKK G +RKVGGSSCSVVGGHSPAQPR APS  DRVLAA RALRGSDTTGAVRLAFGLNTVFFVVAGLR                                                                     RLRAR+PCLAWGDWDDA LK F+ EE             V+E YHRAALPTLARQWNVPFLSK
Sbjct:   10 EGVALSASLASRPLAAAGDLNNPPTSMDTVDPIFALVAVNPLLAAVALPVYFALSVWSTHRVFHFLLTWSATQTAKRCDRWVQECEGTLASSWWQRRVVPLIFPSQTHRSRFCRDADKFEACPKYVQELRLIAAPAIPGGDATPTPARAFSSITNEHHSGKGEHHRCSVFLGTIRRGAARAWREVRAAAKHVGAVAKCAWSERREKAYSAVLKKTGTKRKVGGSSCSVVGGHSPAQPRTAPSQVDRVLAARRALRGSDTTGAVRLAFGLNTVFFVVAGLR---------------------------------------------------------------------RLRARKPCLAWGDWDDASLKSFMEEE-------------VDEFYHRAALPTLARQWNVPFLSK 339

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig10.669.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig10.669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G8X3_ECTSI	7.610e-221	79.52	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JLB3_9PHAE	4.730e-165	66.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 265..286
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..35
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 58..264
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 36..57
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 287..422
None	No IPR available	TMHMM	TMhelix		coord: 36..58
None	No IPR available	TMHMM	TMhelix		coord: 264..286

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig10	contig	Ecto-sp6_S_contig10:2618336..2621671 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig10.669.1	mRNA_Ecto-sp6_S_contig10.669.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig10 2618336..2621671 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig10.669.1 ID=prot_Ecto-sp6_S_contig10.669.1|Name=mRNA_Ecto-sp6_S_contig10.669.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=423bp
MHLGPEDLAIAAPAAFFPLFGDLNNPSASMDAVDPIFALVAVNPLLAAVV
LPVYFALSVWSTHRVVDFLLTWSATQTAKRCDRWAQECEATPASSWWQRR
VEPFIFPSQKHRSRFWKDVEKFEACPKYVQELRLIATPATSGGDATPTPA
RAFSSITNEHHNGKGDSRRCSVLLGTIRKGTARAWREIRASAKRVGAVAK
CAWSETREKVYFAVLKKNGIERKVGGSSCSVVGGHSPAQPRKAPSDEDRV
LAAHRALRGSDTTGAVRLAFGLNTVFFVVAGLRFYLRKSRGGRLRSREWH
RHWRRWQQRGNGGNRTRVVVHGDADNNNNSSGGSTAGNSPLQSRDSVAST
SWRLRAREPCLAWGDWDDAFLKIFLTEEARTSRHPVKWRRQVEESYHRAA
LPTLARQWNVPFLSKVSGSVDA*