prot_Ecto-sp6_S_contig10.664.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.664.1
Unique Nameprot_Ecto-sp6_S_contig10.664.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length2175
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI)

HSP 1 Score: 2634 bits (6827), Expect = 0.000e+0
Identity = 1733/1910 (90.73%), Postives = 1740/1910 (91.10%), Query Frame = 0
Query:    1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIPVATSTXXXXXXXXXXXXXXXXXXXXDILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVSARESDSEGEEDGGLGNGATAKGDAGSGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLMQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAA---GWSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAXXXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPKIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAGMQVDANVGSGDGSAAMSTRSPDGDGKKVTGDGDAGRKPSEITETSGGGAEIADGPGAVTSPPIENGNDGSPDPPAATPTKQEAEALSSSPQPDDGEEAGEGKDEGSRGGSAKRGRAERPSSGGDVGAGDNDGQPDNKRSRVSAFADSEDDAASSGEAVPATEETAATAAAAVDGGPAGTAVGGEEGAEALGIGVAAPAVSSESGRPAAADDAVDPTQPPXXXXXAVTLSKEEQEMIEEEEQLYGARIGASASEGANGSGGEAALGRLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTAKLAGGGGKRSRGGHGGRGSVPNGAAAVAVADGGTSGG---GIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEGGEVGRGPMGGNKRDTLILVSCSASPPAXXXXXXXXGDTRAGHTRVLAFEEDAKVVELPEGDGNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNRHPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSIEEAGEEGEGGGGVWEDVEAVCMFGVQKGGSVGKQSPERYEEEGLPAQKGWWGGFAWGEAGGSGSEPAAPGADGEEAGSSNGEARVEHVSAYVVLCRTGGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVATGIILANGRRGTAGRGGGKKVDGEANGAGTAAPSSDPMEVDDGATAPDSAAVAASASGEAPSAPDETVEKAGADAGGAEXXXXXXXXXXDGVVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSPLAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAASXXXXXXXXXXXXXXXXXXXXXXXXXXAPEEGEGGRSGGRGQDGSVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE 1904
            MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIP                         DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXX SVSARESDSEGEEDGGLGNGATAKGD G+GGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINL QGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAA   G SRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAXXXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPK EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LAGMQVDANVGSGDGSAAMSTRSP GDGKKV GD DA  KPSEITETSGGGAEIADGPGAVTSPPIENGNDGSPDPPAATPTKQEAEALSSSPQPDDGEEAGEGKD GSRGGSAKRGRAERPSSGGDVGAGDNDGQPD KRSRVSA AD EDDAASSGEAVPATEET ATAAAAV G PA TAVGGEEGAEALG GVAAP VSSESGRPAAAD A+DPT   XXXXX                QLYGARIGASASEGA+GSGGEAAL RLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKT KLAG                                    GIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEG                           XXXXXXXXGDTRAGHTRVLAFEEDAKVVELPEGDGNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNR PVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGS+EEAGEEGEGGGGVWE+VEAVCMFGVQKGGSVG+QSPERYEEEGLPAQKGWWGG AWGEAGGSGSEP APG DGEEAGSSNGEARVEHV AYVV+CR GGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LAVATGIILANGRRG AGRGGGKKVDGEANGAGTAAPSSDPMEVDDGATAPDSAAV ASASGEAPSAPDETVEKAGADAG   XXXXXXXXXX  VVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSPLAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGA S XXXXXXXXXXXXXXXXXXXXXXXX  PEEGEG RSGGRGQDGSVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLIL EVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE
Sbjct:    1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIP-------------------------DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXXAAGAGESAAGGVAXXXXXXXXXXXXXXXXXSVSARESDSEGEEDGGLGNGATAKGDGGAGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAADAAGCSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAXXXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT-LAGMQVDANVGSGDGSAAMSTRSPGGDGKKVAGDADADGKPSEITETSGGGAEIADGPGAVTSPPIENGNDGSPDPPAATPTKQEAEALSSSPQPDDGEEAGEGKDAGSRGGSAKRGRAERPSSGGDVGAGDNDGQPDKKRSRVSACADGEDDAASSGEAVPATEETTATAAAAVGGAPASTAVGGEEGAEALGDGVAAPTVSSESGRPAAADAAIDPTPXXXXXXXXXXXXXXXXXXXXXXXQLYGARIGASASEGADGSGGEAALARLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTTKLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTRAGHTRVLAFEEDAKVVELPEGDGNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNRDPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSVEEAGEEGEGGGGVWEEVEAVCMFGVQKGGSVGEQSPERYEEEGLPAQKGWWGGSAWGEAGGSGSEPTAPGDDGEEAGSSNGEARVEHVRAYVVVCRRGGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVATGIILANGRRGAAGRGGGKKVDGEANGAGTAAPSSDPMEVDDGATAPDSAAVDASASGEAPSAPDETVEKAGADAG---XXXXXXXXXXXSVVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSPLAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAVSAXXXXXXXXXXXXXXXXXXXXXXXX-TPEEGEGRRSGGRGQDGSVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILLEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE 1880          
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: D7G8W9_ECTSI (CPSF_A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W9_ECTSI)

HSP 1 Score: 486 bits (1252), Expect = 1.800e-154
Identity = 241/246 (97.97%), Postives = 242/246 (98.37%), Query Frame = 0
Query: 1929 NRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 2174
            +RWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSD YLGSRVGKLTRRRTRGNLRDGARYCLLA TLDGGLG VLPVDERVFRRLYALQGIMSNALGHNGAANP RAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF
Sbjct:   11 SRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANP-RAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 255          
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A835Z873_9STRA (Cleavage/polyadenylation specificity factor, A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z873_9STRA)

HSP 1 Score: 234 bits (598), Expect = 9.650e-66
Identity = 116/269 (43.12%), Postives = 173/269 (64.31%), Query Frame = 0
Query: 1905 SGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDH----GPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDID 2169
            +GPV AVAQ+ R++  +    + +  WDPK+ +L  +G ++   YV+++SV+K  F+++GD   SVQ ++WR+ED S+  L+KD+E  QV++  +L+D+P + IVV D   N+K+L+YAP    SRGG +L+C +D ++G+ VG    +R R N  +  R+      LDG + ++ P++ER FRRLYALQG+M NAL H    NP R  RLF               + +LDG+LLWRFV L A+ Q +LTRAIGTTVD V+ +LLD+D
Sbjct:    3 AGPVGAVAQISRYVATAAAASITILEWDPKSDSLRPVGIYEASQYVVTMSVVK-TFLVLGDVMNSVQFLMWRDEDRSINQLAKDYEPTQVYATVFLVDQPSLGIVVGDSSGNIKILRYAPQLLASRGGHRLVCDADFHIGAPVGAFGPQRLRNNKLNAPRFGAAVGGLDGSVALLAPLEERAFRRLYALQGVMCNALEHGAGVNP-RGARLFRSQLPAAAAAEGGRMKGVLDGALLWRFVSLPAQVQCELTRAIGTTVDAVLLSLLDVD 269          
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A2D4CF34_PYTIN (CPSF_A domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF34_PYTIN)

HSP 1 Score: 209 bits (532), Expect = 1.270e-55
Identity = 124/349 (35.53%), Postives = 194/349 (55.59%), Query Frame = 0
Query: 1845 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGAR---------------YCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFR---------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDI 2168
            YV +GTG   P GED++ +GRL+L+E+DYA     +G+    + KLR +F KE         G +S V+QLG H++ +VG K+IV  ++ K+  L    F+D ++Y++SLSVIK  +++  D Y SV  + WRE+   L  L+KD+E   + + E+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SD +LG ++  + R+ T  +    A+               Y  L  + +G +G ++ V ERVFRRL+ LQ +M N L  N A NP R +R+       R          + K+  LDG +L+RF+ LD   Q +L R IGTT + ++ NLL++
Sbjct:   29 YVVIGTGFVGPHGEDESGKGRLLLYELDYAQYTTAEGETSAKLPKLRLIFIKEH------HHGAISFVSQLGPHVLAAVGMKLIV--YEFKSDQLTACAFYDAQMYIVSLSVIKD-YVMYADVYKSVHFLRWREKQRQLQLLAKDYEPLAITATEFSVAEKKLALLAGDMEENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQITSMIRKATGTSNPPAAQMAGHRKHQEQPSQSQYVTLLGSSEGSVGAIMAVGERVFRRLFTLQNVMINTLPQNCALNP-REFRMMKSNGGRRTGRPDAWCKQKWKKGFLDGHVLFRFLHLDYVAQKELARCIGTTPEVIIHNLLEV 367          
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A1V9ZBF8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBF8_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.200e-53
Identity = 134/340 (39.41%), Postives = 198/340 (58.24%), Query Frame = 0
Query: 1845 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGA--RYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGP-TFR------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 2174
            YV +GTG+  P GED+  +GRL+++E+DYA      G   + V KL+ V+AKE       + G +S V QLG +++ +VG K+IV  ++ K   L    F D ++Y++SL+VIK  +IL GD Y SV  + W   +  L  L+KD E   V + +  + +  + IV AD   NV V Q+AP++  SRGG +LL  +D ++G+RV  + R+R    L +     Y  L +T +GGLGV+ PV E+ FRRLY LQ IM NAL HN   NP R +R   H   T R      ++ K+  LD +++ RF+ LD   Q +L R IGTT + V+ NLL++  ++LF
Sbjct: 1189 YVVIGTGIVSPNGEDENGKGRLLVYEIDYAQYTNASGATGNKVPKLKLVYAKEH------KQGAISMVKQLGIYVLAAVGSKLIV--YELKNSQLVGCAFFDAQLYIVSLNVIKSTYILYGDIYKSVYFLQWSPMEKRLVLLAKDFEHLAVSTTDVSVLDARLGIVAADMLANVHVFQFAPSSIESRGGQRLLRSADFHVGARVTAMLRKR----LFEAKVMTYVTLLATAEGGLGVLTPVHEKTFRRLYTLQTIMINALPHNAGLNP-REFRQAPHSRMTGRPDAWCTWKAKKAFLDMAVIGRFIDLDYVAQRELARCIGTTSEVVLHNLLELQRSTLF 1515          
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A7S1BI36_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BI36_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.710e-53
Identity = 140/397 (35.26%), Postives = 210/397 (52.90%), Query Frame = 0
Query: 1816 VVESHPMDSDENGVCMTLVRL--EQGGAPRM------YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAVKLRQVFAKE-QLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGA--------------------------RYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDH----GPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASL 2173
            V++ H +   E+G+ + ++ L  E  G   M      +V VGTG+ +  GED  ++GR++LFEV      +E+      + L   ++K+  LGPV+   G  +        L++  G +V V +W  K   L  IGF   ++ V  +++ K  F+L+ DAY S+  +VWRE D SLT L+KD+E   V++A ++   P M  V  D R N++  QYAP    SRGG KL+C++D +LG++   L     R +L  G+                          R+ +   T+DGG G V PV+ER FRRLYALQG++ NAL  +GA N  R +RLF      G     E ++ +LDG LL R+  L    Q ++ RAIGTTVD +M NLL++D A +
Sbjct:  156 VLDKHALGEYEHGMSLNVLPLTTEAEGKTGMQTNSTLFVVVGTGIVDQDGEDIGSKGRVLLFEVKKP---KENVNAASPLSLSLTYSKDILLGPVTVLEGLKTGNQT---RLVIGAGAEVTVEQW--KDQQLTQIGFFHAQMQVQGVTMFK-TFMLLSDAYDSIHFLVWRESDKSLTLLAKDYEPTCVYAAGFINRGPTMYFVCHDDRENLQFFQYAPTDPASRGGNKLVCRADYHLGTQTTHLRTHLVRNSLLLGSATPATSWIALRHRDAMALRQEDPDCRRFGVHFGTVDGGFGAVFPVNERTFRRLYALQGVVGNALQQSGALNV-RGWRLFQRTTQRGACRSGERQKGVLDGGLLMRYCQLGYFQQEEIARAIGTTVDMIMDNLLELDCARM 542          
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A5D6Z0P8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Z0P8_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.740e-53
Identity = 128/342 (37.43%), Postives = 197/342 (57.60%), Query Frame = 0
Query: 1843 RMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIG--FHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDG-ARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPS--RAYRLFDHGPTFRYET------KQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLAS 2172
            R YV VGTG   P GED++ RGRL+L+E+DYA      G     + KLR +F K+         G +S VAQLG ++I +VG K+IV  +  +    +LIG  F+D +++++S+S++K  F++ GD Y S   + W+E+   L  L+KD+E   V + E+ + E  +A++  D   N+ V+QYAPN   SRGG +LL   D +LG +V  + R+R    +R     Y  +  + +G +  ++PV ERVFRRL+ LQ +M N L  N A NP   RA +   H  + R +       K++ LD  +L+RF+ LD   Q ++TR IGTT + V+ NLL++  A+
Sbjct: 1473 RPYVVVGTGYVGPHGEDESGRGRLLLYELDYAQYVNHSGSTSGKLPKLRLIFVKDH------RQGAISMVAQLGPYVIAAVGSKLIVYEFKSE----QLIGCAFYDAQMFIVSISIVKD-FVMYGDVYKSAHFLRWKEKQRQLVLLAKDYEPLAVSTTEFNLFEKRLALLAVDVEENLHVMQYAPNDIESRGGQRLLRTGDFHLGVQVSSMFRKRITPAIRSAPVAYVNILGSSEGSISALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRAMKANSHRHSGRPDAWSKQKWKKSFLDAQVLFRFLQLDYVAQKEITRCIGTTPEVVVHNLLEVQRAT 1803          
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A1V9ZXF6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXF6_9STRA)

HSP 1 Score: 218 bits (556), Expect = 2.760e-53
Identity = 126/337 (37.39%), Postives = 194/337 (57.57%), Query Frame = 0
Query: 1845 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFRYET------KQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 2174
            YV +GTG+  P GED+  +GRL+++E+DYA      G   + V KL+ ++AKE       + G +S V QLG +++ +VG K+IV  ++ K   L    F D ++Y++SL+VIK  FIL GD Y S   + W   +  L  L+KD E+  V S E  + +  + +V +D   N+ V+Q+ P++  SRGG +LL  SD ++G+R+  + R+R    +   A Y  L +T +GG+ V+ PV E+ FRRLY LQ IM NAL HN   NP    +   +  T R +       K+  LD +++ R++ LD   Q +L R IGTT D V+ NLL++  ++LF
Sbjct: 1203 YVVIGTGIVSPNGEDENGKGRLLVYEIDYAQYTDVHGVTGNKVPKLKLIYAKEH------KQGAISMVKQLGIYVLAAVGSKLIV--YELKNNQLVGCAFFDAQLYIVSLNVIKSTFILYGDIYKSTYFLQWNPTEKRLVLLAKDFENLNVVSTEISVLDSRLGVVASDMLSNLHVMQFVPSSIESRGGQRLLRTSDFHVGARITTMLRKRLESKI---AIYVTLLATAEGGVNVLTPVYEKSFRRLYTLQTIMINALPHNAGLNPREFRQALHNQLTGRQDAWCKWKGKKAFLDMAVIGRYIDLDYVAQRELARCIGTTADVVLHNLLELQRSTLF 1528          
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A485L0M5_9STRA (Aste57867_14310 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0M5_9STRA)

HSP 1 Score: 218 bits (555), Expect = 3.410e-53
Identity = 128/337 (37.98%), Postives = 197/337 (58.46%), Query Frame = 0
Query: 1845 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDG-KHEHAVKLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFR------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 2174
            YV +GTG+  P GED+  +GRL+++EVDYA      G   +   KL+ ++AKE       + G +S V+QLG +++ +VG K+IV  ++ K   L    F D ++Y++SL+VIK  +IL GD Y SV  ++W+ ++ ++  L+KD+E   + + E  + +  + ++  D + NV VLQY P    SRGG +LL  SD ++G+RV  L R+R   +      Y  L +T +GG+GV++PV ER+FRRLY LQ IM NAL  N   NP    +      T R      ++ K+  LD +++ RF  LD   Q +L R IGTT + VM NLL++  ++LF
Sbjct: 1157 YVIIGTGVVGPNGEDENGKGRLLVYEVDYAQYTNAQGVTGKKLPKLKLIYAKEH------KQGGISMVSQLGAYVLAAVGSKLIV--YELKGGQLVGCAFFDAQLYIVSLNVIK-SYILYGDLYKSVHFLLWKPQEKTIIMLAKDYEPLSLTTTEVSVMDTQLGLIACDMQSNVHVLQYEPTHVESRGGQRLLRTSDFHVGARVTSLLRKRVVES--PFPFYVTLLATAEGGIGVLIPVQERLFRRLYTLQSIMINALPQNAGLNPREFRQAVHTRSTGRPDAWCTWKAKKAFLDTAVIGRFSDLDYVAQRELARCIGTTPEVVMHNLLELQRSTLF 1482          
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Match: A0A024UE49_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UE49_9STRA)

HSP 1 Score: 218 bits (554), Expect = 4.520e-53
Identity = 132/337 (39.17%), Postives = 192/337 (56.97%), Query Frame = 0
Query: 1845 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKLTRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNALGHNGAANPSRAYRLFDHGPTFR------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 2174
            YV VGTG+  P GED+  +GRL+++EVDYA      G     + KL+QV+AK+       + G +S V+QLG +++ +VG K+IV  ++ K   L    F D ++Y++SL+VIK  FIL GD Y SV  + W+ ++ S+  L+KD E   + + E  +    + ++  D + NV VLQY P    SRGG KLL  SD +LG+RV  L R+R          Y  L +T +GG+GV++PV ER+FRR+Y LQ IM N L  N   NP    +      T R      ++ K+  LD S++ RF  LD   Q +L R IGTT + V+ NLL++   +LF
Sbjct: 1164 YVVVGTGVVGPNGEDENGKGRLLVYEVDYAQYTSAHGVTGRKLPKLKQVYAKDH------KQGGISMVSQLGAYVLAAVGSKLIV--YELKGGQLVGCAFFDAQLYIVSLNVIK-SFILYGDIYKSVHFLHWKPQEKSIIMLAKDTEPLDITATEVSVMNSQLGLIACDLQSNVHVLQYEPTHVESRGGQKLLRTSDFHLGTRVTSLLRKRVLDC--PFPLYVTLLATAEGGVGVLIPVQERLFRRMYTLQSIMVNVLPQNAGLNPREFRQALHTRSTGRPDAWCTWKAKKAFLDFSVIGRFSDLDYVAQRELARCIGTTPEVVLHNLLELQRTTLF 1489          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W8_ECTSI0.000e+090.73Cleavage and polyadenylation specificity factor CG... [more]
D7G8W9_ECTSI1.800e-15497.97CPSF_A domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z873_9STRA9.650e-6643.12Cleavage/polyadenylation specificity factor, A sub... [more]
A0A2D4CF34_PYTIN1.270e-5535.53CPSF_A domain-containing protein n=1 Tax=Pythium i... [more]
A0A1V9ZBF8_9STRA1.200e-5339.41Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S1BI36_9STRA2.710e-5335.26Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A5D6Z0P8_9STRA2.740e-5337.43Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1V9ZXF6_9STRA2.760e-5337.39Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A485L0M5_9STRA3.410e-5337.98Aste57867_14310 protein n=1 Tax=Aphanomyces stella... [more]
A0A024UE49_9STRA4.520e-5339.17Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1116..1362
e-value: 1.0E-7
score: 33.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 305..592
e-value: 5.4E-16
score: 60.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1804..2080
e-value: 5.8E-50
score: 172.4
IPR004871Cleavage/polyadenylation specificity factor, A subunit, C-terminalPFAMPF03178CPSF_Acoord: 1815..2139
e-value: 1.5E-52
score: 179.0
NoneNo IPR availablePANTHERPTHR10644:SF2CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1coord: 9..611
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 9..611
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 945..2152
NoneNo IPR availablePANTHERPTHR10644:SF2CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1coord: 945..2152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:2536803..2556475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.664.1mRNA_Ecto-sp6_S_contig10.664.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 2536803..2556475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.664.1 ID=prot_Ecto-sp6_S_contig10.664.1|Name=mRNA_Ecto-sp6_S_contig10.664.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=2175bp
MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHR
DDHSSTAAAAAAAAARDTSKGDERDDDDASGYYLELAGTFPLAGNITALA
VIPVATSTSSTTTQQQQQQQQQQQQQQQDILVVSFGVAKMALVAYDSVLG
RLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLA
AVVAGCQLVVLPARRHVPGSVFVSEEAKRRQRRVLRLRRRAAVAARRNNG
AGAGESAAGGAAGGVDDGSDDDDDDDGDDSVSARESDSEGEEDGGLGNGA
TAKGDAGSGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYE
PIQTCAGRLASKRSTCRLALLSINLMQGRAPVIWQVENLPHDSWDLVPVP
SPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDS
DWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEV
YALRLHLTTVTAAAAGWSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLA
VAASGGSGGDGGSGASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAV
PKREPKIEEEEEEEEDVGQTEGAPAARSSSTTGEKAAAGAAAVGEQGETS
SGGAAAAAPAAGAGAGATVKEEVTEGGGGGLAGMQVDANVGSGDGSAAMS
TRSPDGDGKKVTGDGDAGRKPSEITETSGGGAEIADGPGAVTSPPIENGN
DGSPDPPAATPTKQEAEALSSSPQPDDGEEAGEGKDEGSRGGSAKRGRAE
RPSSGGDVGAGDNDGQPDNKRSRVSAFADSEDDAASSGEAVPATEETAAT
AAAAVDGGPAGTAVGGEEGAEALGIGVAAPAVSSESGRPAAADDAVDPTQ
PPPTTAPAVTLSKEEQEMIEEEEQLYGARIGASASEGANGSGGEAALGRL
GSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTAKLAGGG
GKRSRGGHGGRGSVPNGAAAVAVADGGTSGGGIRTSLVCAAGYGGQGSLA
VFSAGLRTEVVVELSVPGATGVYSSSEGGEVGRGPMGGNKRDTLILVSCS
ASPPAAAGAAAAGGDTRAGHTRVLAFEEDAKVVELPEGDGNPFVCDAATA
DVCSMAGGTVVQAHKQGLRVTRNRHPVQDVLASEDPDLGGLGADAGVTVL
RAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSIEEAGEEGEGGGGVWED
VEAVCMFGVQKGGSVGKQSPERYEEEGLPAQKGWWGGFAWGEAGGSGSEP
AAPGADGEEAGSSNGEARVEHVSAYVVLCRTGGTVEVFSCEGEGAEETRA
RPVFRATGAALAPPTLWNELLLPPAVAAGAAASDDDDEEEGSSLANGGGR
GSDGNRSPMNDDVEEEEAAGGLAVATGIILANGRRGTAGRGGGKKVDGEA
NGAGTAAPSSDPMEVDDGATAPDSAAVAASASGEAPSAPDETVEKAGADA
GGAEAAAAAAAEEEDGVVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDN
GSLLVYEARMVVSPLAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFD
PGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVAEKVRLGATVHGLVHL
PHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGE
QGDGDDDEEEEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLA
LAPGAASAAAATSSSSAARSPSSANDKGGGGGGAPEEGEGGRSGGRGQDG
SVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGT
GMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAVKLRQVFAKEQLGP
VSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYV
MSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYL
IDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDLYLGSRVGKL
TRRRTRGNLRDGARYCLLASTLDGGLGVVLPVDERVFRRLYALQGIMSNA
LGHNGAANPSRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDL
TRAIGTTVDRVMANLLDIDLASLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR004871Cleavage/polyA-sp_fac_asu_C